Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
XR_931245.3
Aligned Length:
3482
Identities:
216
Gaps:
3235

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGAGCCACTGCACCCAGCGTCTCTGCTTCTAATACTCAGCTTTTCTCCTCCGTTAATGATCATCACTTCCCAAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGAGATCAGTGGAAATTTCCTGCAGCCACTGTGTTTATGAGTGGTGCATGCATGTGATTGGGCACACATTGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCACTTTTTCTCTCTTTCTTTTCTCTTTCCTCTCTTTTTTCTTTTACTCATACCCATCCCATCTCTTCATCCAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCAGAGCTGTGGATCACACCGCTGTAGTACCCCAGCCTCTCTACTGCTCCCAGAGCACATCCACACACTTTGAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCTGACCTTGAAGCTCTGATTCCTGAGTCCTAGTTGAAAGGGCCTCGCAACAACCCATGAGATCGGTGATGAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGCCCCCATTTGCCAGCTTTGCAGGGAGAGGTCAAGACCAAGACGATCTTCAGGCCCAAGGGAGGCAGGGAGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGCTTGCAAAGCCCACCCCTGGGAAGAGGCCTCGCAACAACCCACGAGATCTGTGATGACTGCCCCCATTTGCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGATGAGAAGCTGAGGCTCGGAGATATTGAGGAATCTGTCGAGCGTGTTGCTCCACAGAGCTGACAGCTTCCCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAGTGTGTGAGATGTGCCACAGCCAGGGGAGATCTCAGGAAAAAGAGGCCCTCTTCAGGAGTGAAGCTGCTTAT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTGGATTTCCTGACAGTGTGGACTAATTGTCTTATCTTCCACTCTCTACACTAAGAGTATTTACACAGGAATGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CGCAGAGGCTTTTACCTCTGCAAGCCAATTCCCAGGGCTGAAAGCCCACCTGAAATTCCCATCCCCCATCAATG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATGCCACGATGGTTTCCAGAGCAACCACGAGGGATGGCATGGTATGGGGGAGGGAACAGTGGAGATCAGGAGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CAGGAGCCCTCCTCAGTGTGAGCCCTTCCCCAGCTCCCCCTGCATCGGGAGCCAGGTGGGAGGGAGGCAGGAAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGTGTGTGCCTTGATGTTCTGGGCAACAACCCCACTGTTTCTCCCCTTTTCTCAGTATCGGGATTGAATGTTTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGTGATGCAGTCTGCACAATGGCCAGGCACTTATAACACTCAGAGAACATGGGTGGTTTCTGCATCATTTATTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTTTCTTTTTTATCTCCAATGTCCCATACCATTCAAGTATTTGTGCACCCAGTCTTTTCCGTATGCTAGGCACT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGGGACTCAGAGGTGAAGAGATCAGAGGTGGCTCCTGCTCCCGCTGAGTTTACAGTTAGAAGTGGAGATGAAAC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAATACCCTGACATGTGCCGTCCTACCTTCACTCAAGACAAGGGCAAGGGAAGAGAAATTAGGGAGCAGAGGGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGATTTTATAAGAGAACCTAATCTAGTCTGGGGATTTTGAGAAAGCTTCCTGATGGAGGTGACATTTACATTGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GACTGGAAATGTGAGCAGGAACTGGCCAGATGAGATGTGAGATGGGGAGGTGAGGGTTCCAGGCTGAAAGGACT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTGCAGAGGCCCAGTGGCAGGAAGGCAAACCTGGGGAGATCTCAAAGATTGTCTTGACCTACTGTCTTTCCTAC  1554

Query    1  ------------ATG----GAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGC  58
                        .||    ||||||||||||.|.|||.||||||||||||||||||.|||||||.|||||||||
Sbjct 1555  TTTTTTTTTTTTTTGAGACGAGTCTCGCTCTTTCGCCTAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGC  1628

Query   59  AACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCA  132
            ||.||||||||||||||||||..|.|||||.||||||||||||||..||||||||||||||.||.||..|||||
Sbjct 1629  AAGCTCTGCCTCCCAGGTTCACACCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCCACCA  1702

Query  133  CCACGCCCGGCTAA--TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTC  204
            |..|||||||||||  ||||||||||||.|..|||||.||||||..|||||||||.||||.||||||.||.|||
Sbjct 1703  CTGCGCCCGGCTAATTTTTTGTATTTTTAGCAGAGACAGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTC  1776

Query  205  CTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA----------------------------  249
            ||||||||  |||||||| |||||||||||||||||||||.||.||                            
Sbjct 1777  CTGACCTC--GTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCCGGCC  1848

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1849  TCCTACTTTATAGATGAAAAATCTGAGGACAGTGACTTGTTCAAGGTCACACAGAGAATGAGGAACTGGACTGG  1922

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1923  GATTGATCCTGGGGGCCATTCCCTGTCTTCTAGCTCTTTCTCTGGTTCCATCAGGCCTACCAGTTCCAAACTTC  1996

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1997  TCCCAATTTCTTTCTTGGATCACAAGTGATATATCTGACTTCTCTCCCTCAACCCTCAGCACTGAAGGCACTGA  2070

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2071  CTTGGATGTGGGTCACTGGGGAATGTTCTTCAGGTGGGAGGCAAGAGAGGAGAAGCCTTTATGTTTGAATGGGT  2144

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2145  GCTGCCATGACCAGGCACATCCCCCAGGCTGATGGTGGCATGCGAAGCGGAGCAGGGCATGGGTGAGTCACCTC  2218

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2219  CTCACCAGCATCTGAGCCAATACCTCCTTGTCCATGGCTCTGCTGTGGCCCTGGTGTGGCCCAGGGACTCCAAT  2292

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2293  GTCCATTTCCTTCAGAGAGGCGAGTGGAACCTTCTGGTTGGAGGCCTTGTCAGAGCAGCCCTGATAGACTTGGG  2366

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2367  GATCCCAGAGGCTAAAGGGAGCCCTGGCAAACAACAGACCCAGCTTGGAGTCATGGAGCCTCTCCAAAGGTTCT  2440

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2441  GCTGGATCTTAGGCATCTTCTGGTCCTCCCTTCCTGCTCTAATGATGAGGAACTTGAGTCCAGAGAAGGGAAGG  2514

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2515  GATGTTATTCAAGTCCACACAGGGACTCAGAGGCAGAGCTGGTGTCCTGCACCTTACTCCAAGGCTCTCAGCAG  2588

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2589  CTTTGAAGCAGAGGACTATGGGAGGCCTTGAAGACTCCATTATGCGTGGTGCTGACAGCAATGTCACCTTCCCT  2662

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2663  CAACACCTGCAGTACCAGGCAGGCTAGCAGCCATTCGGTCAGATTCTGATCTGCCCTGGAAGTACATAAGATAC  2736

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2737  TACCAAAAATAAGAGTTAGAACCTAGGGGATAGGCCCGTGGGCAGCATCCTCACCCTTTCTCCACCGATGCAAA  2810

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2811  TCTTACCCAGGGACAAGATGGCATGGGGTCACCAGCTGTGGGTCCCCCCTGGGTAAATCACTTAGCCTCAGTTT  2884

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2885  CCCCAACTCTAAAATGGGGATACTGACCCATATTTCATGGTGTGGCTCTGAAATGAAATGAAACGTGAGCTTCC  2958

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2959  TTCTCTCCCCAGCCACCATTTGGTCTATAGCTAGCAATGCCTTTCTCTTTCTCTTTCTCTTCCTCTCCCTCTGC  3032

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3033  CTCTCTCTTTCTCTCCTCGTGATGGTTAATTTTATGTGTCAACTTGACTGGACCACAGGGTGCCCAGGCATTTG  3106

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3107  GTCAGACATTATTCTGGATACGTCTGCGAGGGTGGTTCAGGAGGAGATTAATATTTGAATGGGTAGACTGAATA  3180

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3181  GAGAAGATTGTCCTCCCCAATGCGAATGGGCCTCATCCAATCAATTGAAGACCTGAGTAGAACAAAAGGGCTGA  3254

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3255  ATAAGAGGGAACTCCTGCTGCCTGATGGCCTTGAATGGGGACATCTGTCTTTTCTTGCCTTTGGACTTGAACAG  3328

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3329  AAACATCAGCTCTTCTTTGGTCTTCAGCCTACTGGCTTTGAACTACACCATCGGCTCTATTAGGTCTTCAGCTT  3402

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3403  GCTGACTGCGGCGAATCTTGGGACTTCTCAGCCTCCATAATTGTGTGAGCTGATTCCTTATAATAAAATTTTCT  3476

Query  250  ----  249
                
Sbjct 3477  CTCT  3480

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