Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10801
Subject:
XM_006538907.3
Aligned Length:
3101
Identities:
1655
Gaps:
1261

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACAACAGAGAAGAGTTTAGCGGCTGAAGCTGAGAATTCTCAGCACCAGCAACAGAAGGAAGAAGGAGAGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCACAAACTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTCCCAAGCGGCCGCAGCTGAGGGCAGCGATC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGGTGAGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAACACATGAAGACTTGACCAAGAACAAGGAACGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACATCAGAAAGCAGAGGCCTGTCACGACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCAGGTCTCTGAAGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGAAGGCAGAGAAGTAGAATCAGAGAAAGAGAAAGGTGAAGGGGGTCAGAAGGAGATAGAACTTGGAAACAGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTGATGAAGACATCATTTTAAAGGCCCCCATTGCAGCTCCTGAACCTGAGCTCAAAACAGACCCATCTTTGGAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTTCATTCATTAAGCAGTATAGAGACACAGCCAGCTCAGGAAGAACACAGAGAGGACCCAGATTCTGAAACGAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGAAGGAGAAGGGATTGAAGAGTGCTCTGGAACAGAGGTGAAAGAGGACCCAGAGTCAAGAGCAGAGAGAGAAC  592

Query    1  --------------------------------------ATGCACTGCAAGGTTTCTTTGTTGGATGACACAGTT  36
                                                  ||||||||.|||||.||.||||||||||||||.||.
Sbjct  593  CCGAAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACATGCACTGTAAGGTCTCCTTGTTGGATGACACGGTC  666

Query   37  TATGAATGTGTTGTGGAGAAACATGCTAAGGGACAAGATTTGCTTAAACGAGTATGTGAGCATCTCAATCTTTT  110
            ||.|||||||||||.|||||||||||||||||||||||.|||||.||.|||||.||.|||||.|||||.|||||
Sbjct  667  TACGAATGTGTTGTAGAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGAGTGTGCGAGCACCTCAACCTTTT  740

Query  111  GGAAGAAGACTATTTTGGTCTAGCCATTTGGGATAACGCAACCTCTAAGACATGGCTGGATTCCGCCAAAGAAA  184
            ||||||||||||.||||||.|||||.|.|||||.|.|||||||||||||||||||||||||||.||||||||||
Sbjct  741  GGAAGAAGACTACTTTGGTTTAGCCCTGTGGGACAGCGCAACCTCTAAGACATGGCTGGATTCTGCCAAAGAAA  814

Query  185  TAAAAAAGCAGGTTCGTGGTGTCCCTTGGAATTTTACATTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG  258
            ||||||||||||||||.|||||.|||||||||||.|||||||||||.||||||||||||||.|||||||||||.
Sbjct  815  TAAAAAAGCAGGTTCGAGGTGTTCCTTGGAATTTCACATTTAATGTGAAGTTTTATCCACCCGACCCAGCACAA  888

Query  259  TTAACAGAAGACATAACAAGATATTATTTATGTCTTCAGCTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTG  332
            |||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||||||||||
Sbjct  889  TTAACAGAAGACATAACAAGATACTATTTATGTCTTCAGCTTCGGCAGGACATTGTTGCTGGACGTCTGCCCTG  962

Query  333  TTCCTTTGCAACCTTAGCATTATTAGGTTCTTACACCATCCAGTCTGAACTGGGAGACTACGACCCAGAACTCC  406
            ||||||||||||.|||||..||.|.||.||||||||.|||||||||||.|||||||||||.|||||||||||.|
Sbjct  963  TTCCTTTGCAACTTTAGCCCTACTCGGGTCTTACACGATCCAGTCTGAGCTGGGAGACTATGACCCAGAACTGC  1036

Query  407  ATGGCGTGGATTATGTTAGTGATTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGAAGAGAAGGTCATGGAA  480
            |.|||.||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.||||||||||||
Sbjct 1037  ACGGCATGGATTATGTTAGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGAAGAAAAGGTCATGGAA  1110

Query  481  CTGCATAAGTCATACAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTTTCTTGAGAATGCCAAAAAGTTGTC  554
            .|||||||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1111  TTGCATAAATCATACAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATTTCTTGAGAATGCCAAAAAGTTGTC  1184

Query  555  TATGTATGGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCTCTAGTG  628
            .||||||||||||||||||||.|||||||||||||||||.|||||.||.||.||.||.||.||||||||.||.|
Sbjct 1185  CATGTATGGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAGTGGACATTATTCTCGGCGTCTGCTCCAGCG  1258

Query  629  GCCTTCTGGTTTACAAAGATAAGCTGAGAATTAACCGCTTCCCTTGGCCCAAAGTGCTGAAGATTTCTTATAAA  702
            |||||||||||||||||||.|||.||||||||||||||||.|||||||||||||||||.|||||||||||.|||
Sbjct 1259  GCCTTCTGGTTTACAAAGACAAGTTGAGAATTAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTCTTACAAA  1332

Query  703  CGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCATCGGATTCAAACTTCC  776
            ||.||.|||||.|||||||||||.|||||||||||||||||.||.|||||||||||||||||.|||||.||.||
Sbjct 1333  CGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGTACCATCGGCTTCAAGCTCCC  1406

Query  777  CAGTTACCGAGCAGCTAAGAAATTATGGAAAGTCTGTGTAGAACATCACACGTTTTTCAGATTGACATCTACAG  850
            ||||||.|||||.||.||||||.|||||||.||||||||.||.|||||||||||.||||||.|.||.|||||||
Sbjct 1407  CAGTTATCGAGCGGCCAAGAAACTATGGAAGGTCTGTGTGGAGCATCACACGTTCTTCAGACTCACCTCTACAG  1480

Query  851  ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGGCCGGACTCAAGCTCAGACC  924
            |||||||.|||||||||||.||||||||.||.|||||||||||.||||||||||||||||||||||||||||||
Sbjct 1481  ACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGGCCGGACTCAAGCTCAGACC  1554

Query  925  AGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAG  998
            ||||||||.|||||.||.||||||||||||||.||||||||.|||||.||||||||.||.|||||||||.||||
Sbjct 1555  AGGCAAGCCAGTGCCCTGATTGACAGGCCTGCTCCACACTTTGAGCGGACAGCAAGCAAGCGGGCGTCCAGGAG  1628

Query  999  CCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGG  1072
            ||||||||||||||||||||..||.||..||||||||||||||||||||||.|||||.||.||||||.|||||.
Sbjct 1629  CCTCGATGGAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTCGGCCCACCTCTGCCCCAGCCATTGCTCAGA  1702

Query 1073  GTCAGGTTGCAGAAG-----GTGGCGTCCTAGATGCCTCTGCTAAAAAAACAGTGGTCCCTAAAGCACAGAAGG  1141
            |||||||..||||||     |.||| .||||      ||    |||||||               |||..||||
Sbjct 1703  GTCAGGTCACAGAAGGGCCAGGGGC-ACCTA------TC----AAAAAAA---------------CACCAAAGG  1750

Query 1142  AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCAT--  1213
            ||.|.|||||||.|||||.|||...||.|||.|||||..||||||..||||||||.||||||||||||||||  
Sbjct 1751  AAGCTGTGAAGGTTGAAGAGAAGCGGGGAGAAGAGCCGGCTGAGCCCGCTGAGCCGGAGCCCACAGAAGCATGG  1824

Query 1214  --------------------------------------------------------------------------  1213
                                                                                      
Sbjct 1825  AAGGTGGAAAAAACCCACACCGAGGTCACAGTACCTACCTCAAATGGTGACCAAACGCAGAAGCTTGCAGGAAA  1898

Query 1214  -----------------------GGAAGAAAAAGAGAGAAAGACTAGATGGTGAAAACATTTATATCAGACATA  1264
                                   ||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1899  AGGTGAAGATCTGATAAGAATGAGGAAGAAAAAGAGAGAGAGACTAGATGGTGAAAACATTTATATCAGACATA  1972

Query 1265  GCAATTTAATGTTGGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAAACATCATGCCAGCATCAGTGAGCTG  1338
            |||||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||||||||||.|||
Sbjct 1973  GCAATTTAATGTTGGAGGATTTAGACAAGAGTCAAGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGAACTG  2046

Query 1339  AAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGGGATAAACGCTTATCCACTCACTCACC  1412
            |||||||||||.|||||.||.|||||.|||||||||||.||.||.|||||.||.||||||||.||.||||||||
Sbjct 2047  AAAAAGAACTTTATGGAATCGGTACCCGAACCACGGCCCAGCGAGTGGGACAAGCGCTTATCTACACACTCACC  2120

Query 1413  CTTCCGAACTCTTAACATCAATGGGCAAATCC------------------------------------------  1444
            ||||||.||||||||||||||.||||||.|||                                          
Sbjct 2121  CTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATGGAGTGAAGAAAACTTCTATCCTCCCCTCGG  2194

Query 1445  --------------------------------------------------------------------------  1444
                                                                                      
Sbjct 2195  GAAGAAAGGTTGGTGGGCCAGAGAGTGTAAATGGCATTCGAACAGAGGAGGTGGCTACCGTGACAAAAGGGCCA  2268

Query 1445  --------------------------------------------------------------------------  1444
                                                                                      
Sbjct 2269  TCCACCTACCCTGCCTCTGAATGGGAGTGCCCCAAACAGTCAGTAGTTCCTAGTCAGAGCCTGATGACCACTCC  2342

Query 1445  ----------CCACAG---------------------------------------------GAGAAGGA-----  1458
                      ||||||                                             ||||||||     
Sbjct 2343  GCCGGCGTCTCCACAGAGCTTTGGTTCTGGCTCCCTCTCCATAAACAGCAAGGAGGCGGAAGAGAAGGAGCAGG  2416

Query 1459  --------------------------------------------------------------------------  1458
                                                                                      
Sbjct 2417  GGGCAGCTGGCTATCTTGATGCTGAAGAGATGCCAACAGGCCCAAGTGGGGAATGCTTAGGAGTGGAGGAACAG  2490

Query 1459  --------------------------------------------------------------------------  1458
                                                                                      
Sbjct 2491  GCCAGTGCATTCAGTTTCCCAGTAACTCCAGCTTCCTGCCAGCTGCAACTCGGTGGGGAAAAGGCAGACAGTAG  2564

Query 1459  --------------------------------------------------------------------------  1458
                                                                                      
Sbjct 2565  CGAAGAGCTGGGTGCAGCAGCAGAGACCCTTGAGACCCAGAGCGGATCCTTTCTTGACTCACCTGTGGGTAACC  2638

Query 1459  -----------------------------CCTCCCCTGGTGAAGACACAAACTGTCACCATCTCAGATAATGCC  1503
                                         |||||.|||||.|||||.||||||||||||||||||||||.||||
Sbjct 2639  AGTTCCCCACCCTCATTCGAAGTTTCCAGCCTCCTCTGGTAAAGACTCAAACTGTCACCATCTCAGATACTGCC  2712

Query 1504  AATGCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCTATTGTCCACACTGAGACCAAGACCATCACTTATGA  1577
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||
Sbjct 2713  AATGCTGTGAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGTCCACACTGAGACCAAGACCATCACCTATGA  2786

Query 1578  GGCTGCCCAGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATCACATCTG  1651
            .||||||||||||||.||||.||.|||.|||||.|||||.|||||||||||||||||.||.||.||||||||.|
Sbjct 2787  AGCTGCCCAGACTGAGGACAGCAATGGGGACTTAGACCCTGGAGTCTTGCTGACAGCCCAGACCATCACATCCG  2860

Query 1652  AGACCCCAAGCAGCACCACCACAACTCAAATTACCAAGACTGTAAAAGGTGGGATTTCAGAGACACGTATTGAA  1725
            |||||.||||.||.||.|||||.||.||.|||||||||||||||||||||||||||||.|||||.||.||.||.
Sbjct 2861  AGACCACAAGTAGTACAACCACGACACAGATTACCAAGACTGTAAAAGGTGGGATTTCTGAGACCCGGATCGAG  2934

Query 1726  AAGAGAATTGTGATCACAGGAGATGCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAGGCAAA  1799
            ||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||.||
Sbjct 2935  AAGAGAATTGTGATCACAGGAGATGCCGATATCGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAAGCCAA  3008

Query 1800  GGAGCAGCACCCAGACATGTCAGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGCTGATGAG  1866
            |||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||..||||.|||
Sbjct 3009  GGAGCAGCATCCAGACATGTCAGTGACCAAGGTGGTCGTCCACCAGGAGACAGAGATCTCTGAGGAG  3075

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