Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10801
Subject:
XM_006538911.3
Aligned Length:
2876
Identities:
1590
Gaps:
1099

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACGTCAGCGACCATACCAGCCAATCCAGGAACTCCATGTTTCCCCTCCCCTGATTGCTCTGGGTCTATCAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGCTGCTCTAGGCTGGGCGTCCCGGCCTGGCCGCACCTGCAGCCCCCGCCCCTTCCCGGTTGCGACAGTCGGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTACTGTGCCCGGTCCTGCCCGCCGCCCCAAAGATTGGCAGTTGTCTGCACCAATTACAGGACCTCCCGAGGGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGGGCGGGGCCTCGCATCAGAGTTGCCCTGTCAGTGCAGGTGGAGGCCCCCGGCGGGGCAAAGTGGCAGGAACC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCTTAAAGGGAGAGAGCCGCGGAGAGCGAGGACGCGGCCCGGCCCGGCCCGGCCAGGTCCCTGCCAGGTCCCTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCTGTGCAGCCCAGAGAAGAGTTTAGCGGCTGAAGCTGAGAATTCTCAGCACCAGCAACAGAAGGAAGAAGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAGGGAGCCACAAACTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCTCCCAAGCGGCCGCAGCTGAGGGCAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGATCAGGGTGAGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAACACATGAAGACTTGACCAAGAACAAGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AACGGACATCAGAAAGCAGAGGCCTGTCACGACTGCTCTCCTCATTCCTCAAAAGGCCCAAGTCGCAGGTCTCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAAGAAGAAGGCAGAGAAGTAGAATCAGAGAAAGAGAAAGGTGAAGGGGGTCAGAAGGAGATAGAACTTGGAAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CAGCCTTGATGAAGACATCATTTTAAAGGCCCCCATTGCAGCTCCTGAACCTGAGCTCAAAACAGACCCATCTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGATCTTCATTCATTAAGCAGTATAGAGACACAGCCAGCTCAGGAAGAACACAGAGAGGACCCAGATTCTGAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACGAAGGAAGGAGAAGGGATTGAAGAGTGCTCTGGAACAGAGGTGAAAGAGGACCCAGAGTCAAGAGCAGAGAG  962

Query    1  -------------------------------------------ATGCACTGCAAGGTTTCTTTGTTGGATGACA  31
                                                       ||||||||.|||||.||.|||||||||||||
Sbjct  963  AGAACCCGAAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACATGCACTGTAAGGTCTCCTTGTTGGATGACA  1036

Query   32  CAGTTTATGAATGTGTTGTGGAGAAACATGCTAAGGGACAAGATTTGCTTAAACGAGTATGTGAGCATCTCAAT  105
            |.||.||.|||||||||||.|||||||||||||||||||||||.|||||.||.|||||.||.|||||.|||||.
Sbjct 1037  CGGTCTACGAATGTGTTGTAGAGAAACATGCTAAGGGACAAGACTTGCTGAAGCGAGTGTGCGAGCACCTCAAC  1110

Query  106  CTTTTGGAAGAAGACTATTTTGGTCTAGCCATTTGGGATAACGCAACCTCTAAGACATGGCTGGATTCCGCCAA  179
            |||||||||||||||||.||||||.|||||.|.|||||.|.|||||||||||||||||||||||||||.|||||
Sbjct 1111  CTTTTGGAAGAAGACTACTTTGGTTTAGCCCTGTGGGACAGCGCAACCTCTAAGACATGGCTGGATTCTGCCAA  1184

Query  180  AGAAATAAAAAAGCAGGTTCGTGGTGTCCCTTGGAATTTTACATTTAATGTAAAGTTTTATCCACCTGACCCAG  253
            |||||||||||||||||||||.|||||.|||||||||||.|||||||||||.||||||||||||||.|||||||
Sbjct 1185  AGAAATAAAAAAGCAGGTTCGAGGTGTTCCTTGGAATTTCACATTTAATGTGAAGTTTTATCCACCCGACCCAG  1258

Query  254  CACAGTTAACAGAAGACATAACAAGATATTATTTATGTCTTCAGCTTCGGCAGGACATAGTTGCAGGACGTCTG  327
            ||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.|||||||||
Sbjct 1259  CACAATTAACAGAAGACATAACAAGATACTATTTATGTCTTCAGCTTCGGCAGGACATTGTTGCTGGACGTCTG  1332

Query  328  CCCTGTTCCTTTGCAACCTTAGCATTATTAGGTTCTTACACCATCCAGTCTGAACTGGGAGACTACGACCCAGA  401
            |||||||||||||||||.|||||..||.|.||.||||||||.|||||||||||.|||||||||||.||||||||
Sbjct 1333  CCCTGTTCCTTTGCAACTTTAGCCCTACTCGGGTCTTACACGATCCAGTCTGAGCTGGGAGACTATGACCCAGA  1406

Query  402  ACTCCATGGCGTGGATTATGTTAGTGATTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGAAGAGAAGGTCA  475
            |||.||.|||.||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.|||||||
Sbjct 1407  ACTGCACGGCATGGATTATGTTAGTGATTTTAAACTGGCTCCAAATCAGACCAAGGAACTTGAAGAAAAGGTCA  1480

Query  476  TGGAACTGCATAAGTCATACAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTTTCTTGAGAATGCCAAAAAG  549
            |||||.|||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1481  TGGAATTGCATAAATCATACAGGTCCATGACTCCAGCTCAGGCTGACTTGGAATTTCTTGAGAATGCCAAAAAG  1554

Query  550  TTGTCTATGTATGGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCTC  623
            |||||.||||||||||||||||||||.|||||||||||||||||.|||||.||.||.||.||.||.||||||||
Sbjct 1555  TTGTCCATGTATGGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAGTGGACATTATTCTCGGCGTCTGCTC  1628

Query  624  TAGTGGCCTTCTGGTTTACAAAGATAAGCTGAGAATTAACCGCTTCCCTTGGCCCAAAGTGCTGAAGATTTCTT  697
            .||.||||||||||||||||||||.|||.||||||||||||||||.|||||||||||||||||.||||||||||
Sbjct 1629  CAGCGGCCTTCTGGTTTACAAAGACAAGTTGAGAATTAACCGCTTTCCTTGGCCCAAAGTGCTAAAGATTTCTT  1702

Query  698  ATAAACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCATCGGATTCAAA  771
            |.|||||.||.|||||.|||||||||||.|||||||||||||||||.||.|||||||||||||||||.|||||.
Sbjct 1703  ACAAACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGAGCAAGAACATTATGAAAGTACCATCGGCTTCAAG  1776

Query  772  CTTCCCAGTTACCGAGCAGCTAAGAAATTATGGAAAGTCTGTGTAGAACATCACACGTTTTTCAGATTGACATC  845
            ||.||||||||.|||||.||.||||||.|||||||.||||||||.||.|||||||||||.||||||.|.||.||
Sbjct 1777  CTCCCCAGTTATCGAGCGGCCAAGAAACTATGGAAGGTCTGTGTGGAGCATCACACGTTCTTCAGACTCACCTC  1850

Query  846  TACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGGCCGGACTCAAGCTC  919
            ||||||||||||.|||||||||||.||||||||.||.|||||||||||.|||||||||||||||||||||||||
Sbjct 1851  TACAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGGATCCAAATTCCGATACAGTGGCCGGACTCAAGCTC  1924

Query  920  AGACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC  993
            |||||||||||||.|||||.||.||||||||||||||.||||||||.|||||.||||||||.||.|||||||||
Sbjct 1925  AGACCAGGCAAGCCAGTGCCCTGATTGACAGGCCTGCTCCACACTTTGAGCGGACAGCAAGCAAGCGGGCGTCC  1998

Query  994  CGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTAC  1067
            .||||||||||||||||||||||||..||.||..||||||||||||||||||||||.|||||.||.||||||.|
Sbjct 1999  AGGAGCCTCGATGGAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTCGGCCCACCTCTGCCCCAGCCATTGC  2072

Query 1068  TCAGGGTCAGGTTGCAGAAG-----GTGGCGTCCTAGATGCCTCTGCTAAAAAAACAGTGGTCCCTAAAGCACA  1136
            ||||.|||||||..||||||     |.||| .||||      ||    |||||||               |||.
Sbjct 2073  TCAGAGTCAGGTCACAGAAGGGCCAGGGGC-ACCTA------TC----AAAAAAA---------------CACC  2120

Query 1137  GAAGGAAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAG  1210
            .||||||.|.|||||||.|||||.|||...||.|||.|||||..||||||..||||||||.|||||||||||||
Sbjct 2121  AAAGGAAGCTGTGAAGGTTGAAGAGAAGCGGGGAGAAGAGCCGGCTGAGCCCGCTGAGCCGGAGCCCACAGAAG  2194

Query 1211  CATGGAAGAAAAAGAGAGAAAGACTAGATGGTGAAAACATTTATATCAGACATAGCAATTTAATGTTGGAGGAT  1284
            ||||||                                                               |||||
Sbjct 2195  CATGGA---------------------------------------------------------------AGGAT  2205

Query 1285  TTAGACAAGAGTCAAGAGGAGATCAAAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTC  1358
            |||||||||||||||||.|||||||||||.||.|||||||||||||||||.||||||||||||||.|||||.||
Sbjct 2206  TTAGACAAGAGTCAAGAAGAGATCAAAAAGCACCATGCCAGCATCAGTGAACTGAAAAAGAACTTTATGGAATC  2279

Query 1359  TGTACCAGAACCACGGCCTAGTGAATGGGATAAACGCTTATCCACTCACTCACCCTTCCGAACTCTTAACATCA  1432
            .|||||.|||||||||||.||.||.|||||.||.||||||||.||.||||||||||||||.|||||||||||||
Sbjct 2280  GGTACCCGAACCACGGCCCAGCGAGTGGGACAAGCGCTTATCTACACACTCACCCTTCCGGACTCTTAACATCA  2353

Query 1433  ATGGGCAAATCCCCACAGGAGAAGGACCTCCCCTGGTGAAGACACAAACTGTCACCATCTCAGATAATGCCAAT  1506
            |.||||||.||||.||.|||||.||||||||.|||||.|||||.||||||||||||||||||||||.|||||||
Sbjct 2354  ACGGGCAAGTCCCTACTGGAGATGGACCTCCTCTGGTAAAGACTCAAACTGTCACCATCTCAGATACTGCCAAT  2427

Query 1507  GCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCTATTGTCCACACTGAGACCAAGACCATCACTTATGAGGC  1580
            |||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||.||
Sbjct 2428  GCTGTGAAAAGTGAAATCCCAACCAAAGATGTCCCTATTGTCCACACTGAGACCAAGACCATCACCTATGAAGC  2501

Query 1581  TGCCCAGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATCACATCTGAGA  1654
            ||||||||||||.||||.||.|||.|||||.|||||.|||||||||||||||||.||.||.||||||||.||||
Sbjct 2502  TGCCCAGACTGAGGACAGCAATGGGGACTTAGACCCTGGAGTCTTGCTGACAGCCCAGACCATCACATCCGAGA  2575

Query 1655  CCCCAAGCAGCACCACCACAACTCAAATTACCAAGACTGTAAAAGGTGGGATTTCAGAGACACGTATTGAAAAG  1728
            ||.||||.||.||.|||||.||.||.|||||||||||||||||||||||||||||.|||||.||.||.||.|||
Sbjct 2576  CCACAAGTAGTACAACCACGACACAGATTACCAAGACTGTAAAAGGTGGGATTTCTGAGACCCGGATCGAGAAG  2649

Query 1729  AGAATTGTGATCACAGGAGATGCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGA  1802
            |||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||.|||||
Sbjct 2650  AGAATTGTGATCACAGGAGATGCCGATATCGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGA  2723

Query 1803  GCAGCACCCAGACATGTCAGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGCTGATGAG  1866
            ||||||.|||||||||||||||||||||||||||||||||||||||||.|||||..||||.|||
Sbjct 2724  GCAGCATCCAGACATGTCAGTGACCAAGGTGGTCGTCCACCAGGAGACAGAGATCTCTGAGGAG  2787

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