Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10801
Subject:
XM_006538917.3
Aligned Length:
2630
Identities:
1652
Gaps:
790

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGATGACAACGGCTACTTCTGGGAACATCATGACAACAGAGAAGAGTTTAGCGGCTGAAGCTGAGAATTCTCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCACCAGCAACAGAAGGAAGAAGGAGAGGGAGCCACAAACTCAGGCCAACAAGAAACTCAGCTGGAGGAGGCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCAAGCGGCCGCAGCTGAGGGCAGCGATCAGGGTGAGCAGAAGCTGAAAGCATCCAATGGGGACACTCCAACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CATGAAGACTTGACCAAGAACAAGGAACGGACATCAGAAAGCAGAGGCCTGTCACGACTGCTCTCCTCATTCCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAAAAGGCCCAAGTCGCAGGTCTCTGAAGAAGAAGGCAGAGAAGTAGAATCAGAGAAAGAGAAAGGTGAAGGGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTCAGAAGGAGATAGAACTTGGAAACAGCCTTGATGAAGACATCATTTTAAAGGCCCCCATTGCAGCTCCTGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCTGAGCTCAAAACAGACCCATCTTTGGATCTTCATTCATTAAGCAGTATAGAGACACAGCCAGCTCAGGAAGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACACAGAGAGGACCCAGATTCTGAAACGAAGGAAGGAGAAGGGATTGAAGAGTGCTCTGGAACAGAGGTGAAAG  592

Query    1  --------------------------------------------------------------------ATGCAC  6
                                                                                ||||||
Sbjct  593  AGGACCCAGAGTCAAGAGCAGAGAGAGAACCCGAAGCCTCCCAGAAGCCCGTCAGAAGACACAGAAACATGCAC  666

Query    7  TGCAAGGTTTCTTTGTTGGATGACACAGTTTATGAATGTGTTGTGGAGAAACATGCTAAGGGACAAGATTTGCT  80
            ||.|||||.||.||||||||||||||.||.||.|||||||||||.|||||||||||||||||||||||.|||||
Sbjct  667  TGTAAGGTCTCCTTGTTGGATGACACGGTCTACGAATGTGTTGTAGAGAAACATGCTAAGGGACAAGACTTGCT  740

Query   81  TAAACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAGACTATTTTGGTCTAGCCATTTGGGATAACGCAACCT  154
            .||.|||||.||.|||||.|||||.|||||||||||||||||.||||||.|||||.|.|||||.|.||||||||
Sbjct  741  GAAGCGAGTGTGCGAGCACCTCAACCTTTTGGAAGAAGACTACTTTGGTTTAGCCCTGTGGGACAGCGCAACCT  814

Query  155  CTAAGACATGGCTGGATTCCGCCAAAGAAATAAAAAAGCAGGTTCGTGGTGTCCCTTGGAATTTTACATTTAAT  228
            |||||||||||||||||||.||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||
Sbjct  815  CTAAGACATGGCTGGATTCTGCCAAAGAAATAAAAAAGCAGGTTCGAGGTGTTCCTTGGAATTTCACATTTAAT  888

Query  229  GTAAAGTTTTATCCACCTGACCCAGCACAGTTAACAGAAGACATAACAAGATATTATTTATGTCTTCAGCTTCG  302
            ||.||||||||||||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||||||||
Sbjct  889  GTGAAGTTTTATCCACCCGACCCAGCACAATTAACAGAAGACATAACAAGATACTATTTATGTCTTCAGCTTCG  962

Query  303  GCAGGACATAGTTGCAGGACGTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAGGTTCTTACACCATCCAGT  376
            |||||||||.|||||.||||||||||||||||||||||||||.|||||..||.|.||.||||||||.|||||||
Sbjct  963  GCAGGACATTGTTGCTGGACGTCTGCCCTGTTCCTTTGCAACTTTAGCCCTACTCGGGTCTTACACGATCCAGT  1036

Query  377  CTGAACTGGGAGACTACGACCCAGAACTCCATGGCGTGGATTATGTTAGTGATTTTAAACTGGCCCCGAATCAG  450
            ||||.|||||||||||.|||||||||||.||.|||.||||||||||||||||||||||||||||.||.||||||
Sbjct 1037  CTGAGCTGGGAGACTATGACCCAGAACTGCACGGCATGGATTATGTTAGTGATTTTAAACTGGCTCCAAATCAG  1110

Query  451  ACCAAGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGTCATACAGGTCCATGACTCCAGCTCAGGCTGACTT  524
            |||||||||||||||||.||||||||||||.|||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1111  ACCAAGGAACTTGAAGAAAAGGTCATGGAATTGCATAAATCATACAGGTCCATGACTCCAGCTCAGGCTGACTT  1184

Query  525  GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTATGGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG  598
            |||.||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||.||||
Sbjct 1185  GGAATTTCTTGAGAATGCCAAAAAGTTGTCCATGTATGGAGTTGATCTTCACAAAGCAAAGGACTTGGAGGGAG  1258

Query  599  TAGATATCATCCTAGGTGTCTGCTCTAGTGGCCTTCTGGTTTACAAAGATAAGCTGAGAATTAACCGCTTCCCT  672
            |.||.||.||.||.||.||||||||.||.||||||||||||||||||||.|||.||||||||||||||||.|||
Sbjct 1259  TGGACATTATTCTCGGCGTCTGCTCCAGCGGCCTTCTGGTTTACAAAGACAAGTTGAGAATTAACCGCTTTCCT  1332

Query  673  TGGCCCAAAGTGCTGAAGATTTCTTATAAACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCAAGAGCA  746
            ||||||||||||||.|||||||||||.|||||.||.|||||.|||||||||||.|||||||||||||||||.||
Sbjct 1333  TGGCCCAAAGTGCTAAAGATTTCTTACAAACGCAGCAGCTTCTTCATCAAGATCCGGCCTGGAGAGCAAGAACA  1406

Query  747  GTATGAAAGTACCATCGGATTCAAACTTCCCAGTTACCGAGCAGCTAAGAAATTATGGAAAGTCTGTGTAGAAC  820
            .|||||||||||||||||.|||||.||.||||||||.|||||.||.||||||.|||||||.||||||||.||.|
Sbjct 1407  TTATGAAAGTACCATCGGCTTCAAGCTCCCCAGTTATCGAGCGGCCAAGAAACTATGGAAGGTCTGTGTGGAGC  1480

Query  821  ATCACACGTTTTTCAGATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTT  894
            ||||||||||.||||||.|.||.||||||||||||||.|||||||||||.||||||||.||.|||||||||||.
Sbjct 1481  ATCACACGTTCTTCAGACTCACCTCTACAGACACCATCCCCAAAAGCAAGTTTCTTGCCCTGGGATCCAAATTC  1554

Query  895  CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGA  968
            ||||||||||||||||||||||||||||||||||||||.|||||.||.||||||||||||||.||||||||.||
Sbjct 1555  CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAAGCCAGTGCCCTGATTGACAGGCCTGCTCCACACTTTGA  1628

Query  969  GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTC  1042
            |||.||||||||.||.|||||||||.||||||||||||||||||||||||..||.||..|||||||||||||||
Sbjct 1629  GCGGACAGCAAGCAAGCGGGCGTCCAGGAGCCTCGATGGAGCAGCAGCTGCTGAGTCCACAGACCGAAGTCCTC  1702

Query 1043  GGCCCACTTCTGCACCTGCCATTACTCAGGGTCAGGTTGCAGAAG-----GTGGCGTCCTAGATGCCTCTGCTA  1111
            |||||||.|||||.||.||||||.|||||.|||||||..||||||     |.||| .||||      ||    |
Sbjct 1703  GGCCCACCTCTGCCCCAGCCATTGCTCAGAGTCAGGTCACAGAAGGGCCAGGGGC-ACCTA------TC----A  1765

Query 1112  AAAAAACAGTGGTCCCTAAAGCACAGAAGGAAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAG  1185
            ||||||               |||..||||||.|.|||||||.|||||.|||...||.|||.|||||..|||||
Sbjct 1766  AAAAAA---------------CACCAAAGGAAGCTGTGAAGGTTGAAGAGAAGCGGGGAGAAGAGCCGGCTGAG  1824

Query 1186  CAAGCTGAGCCAGAGCCCACAGAAGCAT----------------------------------------------  1213
            |..||||||||.||||||||||||||||                                              
Sbjct 1825  CCCGCTGAGCCGGAGCCCACAGAAGCATGGAAGGTGGAAAAAACCCACACCGAGGTCACAGTACCTACCTCAAA  1898

Query 1214  -----------------------------------------------------GGAAGAAAAAGAGAGAAAGAC  1234
                                                                 ||||||||||||||||.||||
Sbjct 1899  TGGTGACCAAACGCAGAAGCTTGCAGGAAAAGGTGAAGATCTGATAAGAATGAGGAAGAAAAAGAGAGAGAGAC  1972

Query 1235  TAGATGGTGAAAACATTTATATCAGACATAGCAATTTAATGTTGGAGGATTTAGACAAGAGTCAAGAGGAGATC  1308
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1973  TAGATGGTGAAAACATTTATATCAGACATAGCAATTTAATGTTGGAGGATTTAGACAAGAGTCAAGAAGAGATC  2046

Query 1309  AAAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCTAGTGA  1382
            |||||.||.|||||||||||||||||.||||||||||||||.|||||.||.|||||.|||||||||||.||.||
Sbjct 2047  AAAAAGCACCATGCCAGCATCAGTGAACTGAAAAAGAACTTTATGGAATCGGTACCCGAACCACGGCCCAGCGA  2120

Query 1383  ATGGGATAAACGCTTATCCACTCACTCACCCTTCCGAACTCTTAACATCAATGGGCAAATCCCCACAGGAGAAG  1456
            .|||||.||.||||||||.||.||||||||||||||.||||||||||||||.||||||.||||.||.|||||.|
Sbjct 2121  GTGGGACAAGCGCTTATCTACACACTCACCCTTCCGGACTCTTAACATCAACGGGCAAGTCCCTACTGGAGATG  2194

Query 1457  GACCTCCCCTGGTGAAGACACAAACTGTCACCATCTCAGATAATGCCAATGCTGTGAAAAGTGAAATCCCAACC  1530
            |||||||.|||||.|||||.||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 2195  GACCTCCTCTGGTAAAGACTCAAACTGTCACCATCTCAGATACTGCCAATGCTGTGAAAAGTGAAATCCCAACC  2268

Query 1531  AAAGACGTCCCTATTGTCCACACTGAGACCAAGACCATCACTTATGAGGCTGCCCAGACTGACGACAACAGTGG  1604
            |||||.|||||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||||.||.|||
Sbjct 2269  AAAGATGTCCCTATTGTCCACACTGAGACCAAGACCATCACCTATGAAGCTGCCCAGACTGAGGACAGCAATGG  2342

Query 1605  AGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATCACATCTGAGACCCCAAGCAGCACCACCACAACTC  1678
            .|||||.|||||.|||||||||||||||||.||.||.||||||||.||||||.||||.||.||.|||||.||.|
Sbjct 2343  GGACTTAGACCCTGGAGTCTTGCTGACAGCCCAGACCATCACATCCGAGACCACAAGTAGTACAACCACGACAC  2416

Query 1679  AAATTACCAAGACTGTAAAAGGTGGGATTTCAGAGACACGTATTGAAAAGAGAATTGTGATCACAGGAGATGCT  1752
            |.|||||||||||||||||||||||||||||.|||||.||.||.||.||||||||||||||||||||||||||.
Sbjct 2417  AGATTACCAAGACTGTAAAAGGTGGGATTTCTGAGACCCGGATCGAGAAGAGAATTGTGATCACAGGAGATGCC  2490

Query 1753  GATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGCAGCACCCAGACATGTCAGTGAC  1826
            |||||.|||||||||||||||||||||||||||||||||||.||.|||||||||||.|||||||||||||||||
Sbjct 2491  GATATCGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAAGCCAAGGAGCAGCATCCAGACATGTCAGTGAC  2564

Query 1827  CAAGGTGGTCGTCCACCAGGAGACCGAGATTGCTGATGAG  1866
            ||||||||||||||||||||||||.|||||..||||.|||
Sbjct 2565  CAAGGTGGTCGTCCACCAGGAGACAGAGATCTCTGAGGAG  2604

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