Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10801
Subject:
XM_017000596.1
Aligned Length:
2367
Identities:
1803
Gaps:
564

Alignment

Query    1  ATGCACTGCAAGGTTTCTTTGTTGGATGACACAGTTTATGAATGTGTTGTGGAGAAACATGCTAAGGGACAAGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCACTGCAAGGTTTCTTTGTTGGATGACACAGTTTATGAATGTGTTGTGGAGAAACATGCTAAGGGACAAGA  74

Query   75  TTTGCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAGACTATTTTGGTCTAGCCATTTGGGATAACG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TTTGCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAGACTATTTTGGTCTAGCCATTTGGGATAACG  148

Query  149  CAACCTCTAAGACATGGCTGGATTCCGCCAAAGAAATAAAAAAGCAGGTTCGTGGTGTCCCTTGGAATTTTACA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CAACCTCTAAGACATGGCTGGATTCCGCCAAAGAAATAAAAAAGCAGGTTCGTGGTGTCCCTTGGAATTTTACA  222

Query  223  TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAGTTAACAGAAGACATAACAAGATATTATTTATGTCTTCA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAGTTAACAGAAGACATAACAAGATATTATTTATGTCTTCA  296

Query  297  GCTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAGGTTCTTACACCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAGGTTCTTACACCA  370

Query  371  TCCAGTCTGAACTGGGAGACTACGACCCAGAACTCCATGGCGTGGATTATGTTAGTGATTTTAAACTGGCCCCG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCAGTCTGAACTGGGAGACTACGACCCAGAACTCCATGGCGTGGATTATGTTAGTGATTTTAAACTGGCCCCG  444

Query  445  AATCAGACCAAGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGTCATACAGGTCCATGACTCCAGCTCAGGC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AATCAGACCAAGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGTCATACAGGTCCATGACTCCAGCTCAGGC  518

Query  519  TGACTTGGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTATGGAGTTGATCTTCATAAAGCAAAGGACTTGG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGACTTGGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTATGGAGTTGATCTTCATAAAGCAAAGGACTTGG  592

Query  593  AAGGAGTAGATATCATCCTAGGTGTCTGCTCTAGTGGCCTTCTGGTTTACAAAGATAAGCTGAGAATTAACCGC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAGGAGTAGATATCATCCTAGGTGTCTGCTCTAGTGGCCTTCTGGTTTACAAAGATAAGCTGAGAATTAACCGC  666

Query  667  TTCCCTTGGCCCAAAGTGCTGAAGATTTCTTATAAACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTCCCTTGGCCCAAAGTGCTGAAGATTTCTTATAAACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCA  740

Query  741  AGAGCAGTATGAAAGTACCATCGGATTCAAACTTCCCAGTTACCGAGCAGCTAAGAAATTATGGAAAGTCTGTG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGAGCAGTATGAAAGTACCATCGGATTCAAACTTCCCAGTTACCGAGCAGCTAAGAAATTATGGAAAGTCTGTG  814

Query  815  TAGAACATCACACGTTTTTCAGATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAGAACATCACACGTTTTTCAGATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCC  888

Query  889  AAATTTCGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAATTTCGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACA  962

Query  963  CTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAA  1036

Query 1037  GTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAGGTTGCAGAAGGTGGCGTCCTAGATGCCTCTGCT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAGGTTGCAGAAGGTGGCGTCCTAGATGCCTCTGCT  1110

Query 1111  AAAAAAACAGTGGTCCCTAAAGCACAGAAGGAAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAAAAAACAGTGGTCCCTAAAGCACAGAAGGAAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGA  1184

Query 1185  GCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGAAAAAGAGAGAAAGACTAGATGGTGAAAACATTTATATCA  1258
            ||||||||||||||||||||||||||||||||                                          
Sbjct 1185  GCAAGCTGAGCCAGAGCCCACAGAAGCATGGA------------------------------------------  1216

Query 1259  GACATAGCAATTTAATGTTGGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAAACATCATGCCAGCATCAGT  1332
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1217  ---------------------AGGATTTAGACAAGAGTCAAGAGGAGATCAAAAAACATCATGCCAGCATCAGT  1269

Query 1333  GAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGGGATAAACGCTTATCCACTCA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1270  GAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGGGATAAACGCTTATCCACTCA  1343

Query 1407  CTCACCCTTCCGAACTCTTAACATCAATGGGCAAATCCCCACAGGAGAAGGA----------------------  1458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||                      
Sbjct 1344  CTCACCCTTCCGAACTCTTAACATCAATGGGCAAATCCCCACAGGAGAAGGAGTGAAGAAAACTTCTGTCCTAC  1417

Query 1459  --------------------------------------------------------------------------  1458
                                                                                      
Sbjct 1418  CCTCGGAAAGAAAGGTTGGTGGGCCAGAGAGTATAAATGGCATTCGCACAGAGGAGGTGGCTGTCGTGACAAAG  1491

Query 1459  --------------------------------------------------------------------------  1458
                                                                                      
Sbjct 1492  GGGCCATCTACTAACCCTGACTCTGAATGGGAGGGTCCCAAGCATTCGGTAGTTCCTAGTAAAAGCCAGATGAC  1565

Query 1459  --------------------------------------------------------------------------  1458
                                                                                      
Sbjct 1566  CACCTCGTCGGAGTCTCTGCAAAGCTTTGCCTTTGGCTCCCTCTCCATAAGCAGCAAGGAGACAGAAGAGAAGG  1639

Query 1459  --------------------------------------------------------------------------  1458
                                                                                      
Sbjct 1640  AGGAGGGGGCAGCTGGCTATCTTGATATTAAGGAGATGCCAAGAGGCCCAACTGGGGGATGTATAGGAGTGGAG  1713

Query 1459  --------------------------------------------------------------------------  1458
                                                                                      
Sbjct 1714  GAACAGGCCAGTGCCTTAAAGTTCTCAGTAACACCAGCTTCCTGTCAGCTGCAACCTGGTGTAAAAAAGGCAGA  1787

Query 1459  --------------------------------------------------------------------------  1458
                                                                                      
Sbjct 1788  GAGTAGTGAAGAACATGTTACACCAGGAGAGCCACCTGGAAAACAAAATGGATCATTTCTTGACTTTCATGTGG  1861

Query 1459  -----------------------------------CCTCCCCTGGTGAAGACACAAACTGTCACCATCTCAGAT  1497
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct 1862  GTAACCAGTTCCCCACCCTCATTCGAAGTTTCCAGCCTCCCCTGGTGAAGACACAAACTGTCACCATCTCAGAT  1935

Query 1498  AATGCCAATGCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCTATTGTCCACACTGAGACCAAGACCATCAC  1571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1936  AATGCCAATGCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCTATTGTCCACACTGAGACCAAGACCATCAC  2009

Query 1572  TTATGAGGCTGCCCAGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATCA  1645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2010  TTATGAGGCTGCCCAGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATCA  2083

Query 1646  CATCTGAGACCCCAAGCAGCACCACCACAACTCAAATTACCAAGACTGTAAAAGGTGGGATTTCAGAGACACGT  1719
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2084  CATCTGAGACCCCAAGCAGCACCACCACAACTCAAATTACCAAGACTGTAAAAGGTGGGATTTCAGAGACACGT  2157

Query 1720  ATTGAAAAGAGAATTGTGATCACAGGAGATGCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGA  1793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2158  ATTGAAAAGAGAATTGTGATCACAGGAGATGCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGA  2231

Query 1794  GGCAAAGGAGCAGCACCCAGACATGTCAGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGCTGATGAG  1866
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2232  GGCAAAGGAGCAGCACCCAGACATGTCAGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGCTGATGAG  2304

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