Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10815
Subject:
NM_210071.2
Aligned Length:
1630
Identities:
1414
Gaps:
74

Alignment

Query    1  ATGGAAGAAGAGCAAGATTTACCAGAGCAACCAGTGAAAAAAGCCAAGATGCAGGAATCAGGAGAGCAAACTAT  74
            |||||||||||||||||..|||||||||||||.||||||||||||||||||||||||.||.||||.||.|||.|
Sbjct    1  ATGGAAGAAGAGCAAGACCTACCAGAGCAACCGGTGAAAAAAGCCAAGATGCAGGAACCAAGAGAACAGACTTT  74

Query   75  AAGTCAAGTAAGCAATCCAGATGTCAGTGATCAGAAGCCTGAAACATCAAGCCTTGCTTCAAACCTTCCCATGT  148
            |||||||||||.|||.|||||||.|||||||.||||||||||.|||||.||||||||.|||||.||...|||||
Sbjct   75  AAGTCAAGTAAACAACCCAGATGCCAGTGATGAGAAGCCTGAGACATCCAGCCTTGCGTCAAATCTCAGCATGT  148

Query  149  CAGAGGAAATTATGACATGCACCGATTACATCCCTCGCTCATCCAATGATTATACCTCACAAATGTATTCTGCA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CAGAGGAAATTATGACATGCACCGATTACATCCCTCGCTCATCCAATGATTATACCTCACAAATGTATTCTGCA  222

Query  223  AAACCTTATGCACATATTCTCTCAGTTCCTGTTTCGGAAACTGCTTACCCTGGACAGACTCAATACCAGACACT  296
            ||||||||||||||.||.|||||||||||||||||||||||..||||.|||||.||||||||.|||||||||||
Sbjct  223  AAACCTTATGCACACATCCTCTCAGTTCCTGTTTCGGAAACCACTTATCCTGGGCAGACTCAGTACCAGACACT  296

Query  297  ACAGCAGACTCAACCCTATGCTGTCTACCCTCAGGCAACCCAAACGTATGGACTACCTCCTTTTGCTTCAAGCA  370
            .|||||..||||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||||
Sbjct  297  GCAGCAATCTCAACCCTACGCTGTCTACCCTCAGGCAACCCAAACTTACGGACTACCTCCTTTCGCTTCAAGCA  370

Query  371  CAAATGCCAGCCTGATATCTACTTCTTCTACAATTGCCAATATTCCAGCAGCAGCAGTAGCCAGCATCTCAAAC  444
            |||||||||||||||||.|.|||||.|||.|||||||||||||||||||||||||.||.|||||||||||||||
Sbjct  371  CAAATGCCAGCCTGATACCCACTTCATCTGCAATTGCCAATATTCCAGCAGCAGCTGTGGCCAGCATCTCAAAC  444

Query  445  CAGGATTATCCCACCTATACTATTCTTGGTCAGAATCAGTACCAGGCCTGCTACCCCAGCTCCAGCTTTGGAGT  518
            |||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||
Sbjct  445  CAGGATTATCCCACCTATACTATTCTTGGACAGAATCAGTACCAGGCCTGCTACCCCAGTTCCAGCTTTGGAGT  518

Query  519  CACAGGTCAGACTAACAGTGATGCAGAGAGCACCACATTAGCAGCAACCACATACCAGTCGGAGAAGCCTAGTG  592
            ||||||||||||||||||||||||.||||.|||.|||||||||||.||.|||||||||.|||||||||||||||
Sbjct  519  CACAGGTCAGACTAACAGTGATGCTGAGACCACAACATTAGCAGCTACAACATACCAGACGGAGAAGCCTAGTG  592

Query  593  TCATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCTGGAGACCCTTCTACAAGTCCATCTTTGTCCCAGACT  666
            ..||||.|||||||||.||..|||||||.|||.||||   .|||.|.|||.||||.|||.||||||||||||||
Sbjct  593  CTATGGTGCCTGCACCAGCCACACAGAGGCTTCCCTC---CGACTCCTCTGCAAGCCCACCTTTGTCCCAGACT  663

Query  667  ACACCAAGTAAAGATACTGATGATCAGTCCAGGAAAAACATGACTAGCAAGAACCGGGGCAAGAGGAAAGCTGA  740
            |||||||.|||||||.|||||||||||.|||||||||||||||||..|||||||||||||||||||||||||||
Sbjct  664  ACACCAAATAAAGATGCTGATGATCAGGCCAGGAAAAACATGACTGTCAAGAACCGGGGCAAGAGGAAAGCTGA  737

Query  741  TGCCACTTCTTCCCAAGACAGTGAATTAGAACGGGTATTTCTGTGGGACTTGGATGAAACCATCATCATCTTCC  814
            |||||..||||||||.|||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||.|
Sbjct  738  TGCCAGCTCTTCCCAGGACAGTGAATTGGAACGGGTATTTCTCTGGGACTTGGACGAAACCATCATCATCTTTC  811

Query  815  ACTCACTTCTTACTGGATCCTATGCCCAGAAATATGGAAAGGACCCAACAGTAGTGATTGGCTCAGGTTTAACA  888
            |.||.|||||.||||||||||||||.|||||.|||||||||||||||||||||||.|||||||||||||||||.
Sbjct  812  ATTCCCTTCTCACTGGATCCTATGCTCAGAAGTATGGAAAGGACCCAACAGTAGTAATTGGCTCAGGTTTAACC  885

Query  889  ATGGAAGAAATGATTTTTGAAGTGGCTGATACTCATCTATTTTTCAATGACTTAGAGGAGTGTGACCAGGTACA  962
            ||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.||
Sbjct  886  ATGGAAGAAATGATTTTTGAAGTGGCTGATACACATCTATTTTTCAATGACTTAGAGGAGTGTGACCAGGTGCA  959

Query  963  TGTGGAAGATGTGGCTTCTGATGACAATGGCCAAGACTTGAGCAACTACAGTTTCTCAACAGATGGTTTCAGTG  1036
            |||||||||||||||||||||||||||||||||.||.||||||||||||||||||||.||||||||||||||||
Sbjct  960  TGTGGAAGATGTGGCTTCTGATGACAATGGCCAGGATTTGAGCAACTACAGTTTCTCCACAGATGGTTTCAGTG  1033

Query 1037  GCTCAGGAGGTAGTGGCAGCCATGGTTCATCTGTGGGTGTTCAGGGAGGTGTGGACTGGATGAGGAAACTAGCT  1110
            |.||||||||.|||||.|||||.||.|||||||||||.||||||||||||||||||||||||||||||||.||.
Sbjct 1034  GTTCAGGAGGCAGTGGTAGCCACGGCTCATCTGTGGGCGTTCAGGGAGGTGTGGACTGGATGAGGAAACTGGCC  1107

Query 1111  TTCCGCTACCGGAAAGTGAGAGAAATCTATGATAAGCATAAAAGCAACGTGGGTGGTCTCCTCAGTCCCCAGAG  1184
            ||.||||||||.||||||||.||||||||.||.||||||||||||||.||||||||.||||||||.||||||||
Sbjct 1108  TTTCGCTACCGAAAAGTGAGGGAAATCTACGACAAGCATAAAAGCAATGTGGGTGGCCTCCTCAGCCCCCAGAG  1181

Query 1185  GAAGGAAGCACTGCAGAGATTAAGAGCAGAAATTGAAGTTTTAACAGATTCCTGGTTAGGAACTGCATTAAAGT  1258
            |||||||||||||||||||.|.||||||||.||.||.||..|.||.||.|||||||||||||||||..|.||||
Sbjct 1182  GAAGGAAGCACTGCAGAGACTCAGAGCAGAGATCGAGGTGCTGACGGACTCCTGGTTAGGAACTGCGCTCAAGT  1255

Query 1259  CCTTACTTCTCATCCAGTCCAGAAAGAATTGTGTGAATGTTCTGATCACTACCACCCAGCTGGTTCCAGCCCTG  1332
            ||||.||||||||||||||..|||||||.||||.|||||||||||||||||||||.|||.||||||||||||||
Sbjct 1256  CCTTGCTTCTCATCCAGTCTCGAAAGAACTGTGCGAATGTTCTGATCACTACCACGCAGTTGGTTCCAGCCCTG  1329

Query 1333  GCCAAGGTTCTCCTATATGGACTAGGAGAAATATTTCCTATTGAGAACATCTATAGTGCTACCAAAATTGGTAA  1406
            ||||||||||||||.||||||||||||||.||||||||||||||.||||||||.||||||||||||||.|||||
Sbjct 1330  GCCAAGGTTCTCCTGTATGGACTAGGAGAGATATTTCCTATTGAAAACATCTACAGTGCTACCAAAATCGGTAA  1403

Query 1407  GGAGAGCTGCTTTGAGAGAATTGTGTCAAGGTTTGGAAAGAAAGTCACATATGTAGTGATTGGAGATGGACGAG  1480
            ||||||||||||||||||||||||.||.||||||||.||.||||||||||||||||||||||||||||||||||
Sbjct 1404  GGAGAGCTGCTTTGAGAGAATTGTTTCGAGGTTTGGGAAAAAAGTCACATATGTAGTGATTGGAGATGGACGAG  1477

Query 1481  ATGAAGAAATTGCAGCCAAACAG--CAACTCTAT----TTCTTAGA-----------CATGGAGGCAT-TGGGT  1536
            |||||||||||||||||||.|||  ||||   ||    ||| |.||           ||.||||  || |||..
Sbjct 1478  ATGAAGAAATTGCAGCCAAGCAGCACAAC---ATGCCCTTC-TGGAGGATCACAAACCACGGAG--ATCTGGTG  1545

Query 1537  TGCCAGCTAGAACCAACTGCCCTGATA-CT---CTTCATCCAGTTAAGTGGAAACCTTAGCAACTATAATAAAC  1606
            |.||.||    ||||   |.|.|.|.| ||   ||||.||                                  
Sbjct 1546  TCCCTGC----ACCA---GGCTTTAGAGCTTGACTTCCTC----------------------------------  1578

Query 1607  TA  1608
              
Sbjct 1579  --  1578

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