Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11057
Subject:
NM_001323302.2
Aligned Length:
1284
Identities:
668
Gaps:
459

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGCAGAAGCAAGCGTGACAACAATTTTTATAGTGTAGAGATTGGAGATTCTACATTCACAGTCCTGAAACG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATATCAGAATTTAAAACCTATAGGCTCAGGAGCTCAAGGAATAGTATGCGCAGCTTATGATGCCATTCTTGAAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAAATGTTGCAATCAAGAAGCTAAGCCGACCATTTCAGAATCAGACTCATGCCAAGCGGGCCTACAGAGAGCTA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTCTTATGAAATGTGTTAATCACAAAAATATAATTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGA  296

Query    1  -------------------------ATGGAACTGATGGATGCCAA-CTTATGTCAAGTGATTCAGATGGAATTA  48
                                     |||||.||.||||||||.|| ||| ||.|||||||||||||||||..||
Sbjct  297  AGAATTTCAAGATGTTTACATAGTCATGGAGCTCATGGATGCAAATCTT-TGCCAAGTGATTCAGATGGAGCTA  369

Query   49  GACCATGAGCGAATGTCTTACCTGCTGTACCAAATGTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTAT  122
            ||.|||||..|||||||.|||||.||.||.||.|||.|||||||.||.||||||||.|||||||||||||||||
Sbjct  370  GATCATGAAAGAATGTCCTACCTTCTCTATCAGATGCTGTGTGGAATCAAGCACCTTCATTCTGCTGGAATTAT  443

Query  123  TCACAGGGATTTAAAACCAAGTAACATTGTAGTCAAGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGG  196
            |||..||||.|||||.||.|||||.||.|||||.||.|||||||||||.|||||.||.||.|||||.||.||||
Sbjct  444  TCATCGGGACTTAAAGCCCAGTAATATAGTAGTAAAATCTGATTGCACTTTGAAGATTCTTGACTTCGGTCTGG  517

Query  197  CCAGGACAGCAGGCACAAGCTTCATGATGACTCCATATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATC  270
            |||||||.|||||.||.||.||.||||||||.||.|||||.|||||.||.||.||||||||.||.|||||||||
Sbjct  518  CCAGGACTGCAGGAACGAGTTTTATGATGACGCCTTATGTAGTGACTCGCTACTACAGAGCACCCGAGGTCATC  591

Query  271  CTGGGGATGGGCTACAAGGAGAACGTGGATATATGGTCTGTGGGATGCATTATGGGAGAAATGGTTCGCCACAA  344
            ||.||.||||||||||||||.|||||||||.|||||||||||||.|||||||||||||||||||||.|||||||
Sbjct  592  CTTGGCATGGGCTACAAGGAAAACGTGGATTTATGGTCTGTGGGGTGCATTATGGGAGAAATGGTTTGCCACAA  665

Query  345  AATCCTCTTTCCAGGAAGGGACTATATTGACCAGTGGAATAAGGTAATTGAACAACTAGGAACACCATGTCCAG  418
            ||||||||||||||||||||||||||||||.|||||||||||.||.||||||||.||.||||||||||||||.|
Sbjct  666  AATCCTCTTTCCAGGAAGGGACTATATTGATCAGTGGAATAAAGTTATTGAACAGCTTGGAACACCATGTCCTG  739

Query  419  AATTCATGAAGAAATTGCAACCCACAGTAAGAAACTATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTC  492
            ||||||||||||||.|||||||.||||||||.|..||.||.||.||..|.||.||.|||||.|||...|.|||.
Sbjct  740  AATTCATGAAGAAACTGCAACCAACAGTAAGGACTTACGTTGAAAACAGACCTAAATATGCTGGATATAGCTTT  813

Query  493  CCCAAACTCTTCCCAGATTCCCTCTTCCCAGCGGACTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGA  566
            ...|||||||||||.|||..|||.||||||||.|||||.||.|||||.|||||.||||||||.||.||.|||||
Sbjct  814  GAGAAACTCTTCCCTGATGTCCTTTTCCCAGCTGACTCAGAACACAACAAACTTAAAGCCAGTCAGGCAAGGGA  887

Query  567  CTTGTTGTCAAAGATGCTAGTGATTGACCCAGCAAAAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACA  640
            .|||||.||.||.|||||.||.||.||..||.|.|||||.||.||.||.||.||.||..|.||.||.||.||||
Sbjct  888  TTTGTTATCCAAAATGCTGGTAATAGATGCATCTAAAAGGATCTCTGTAGATGAAGCTCTCCAACACCCGTACA  961

Query  641  TCAACGTCTGGTATGACCCAGCCGAAGTGGAGGCGCCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGA  714
            ||||.|||||||||||.||..|.||||..||.||.||.|||||..||||...||||||||||||.||||||||.
Sbjct  962  TCAATGTCTGGTATGATCCTTCTGAAGCAGAAGCTCCACCACCAAAGATCCCTGACAAGCAGTTAGATGAAAGG  1035

Query  715  GAACACACAATTGAAGAATGGAAAGAACTTATCTACAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGG  788
            |||||||||||.|||||.|||||||||.|.||.||.||||||||.|||.|.|..||.||.|..||.||.|||||
Sbjct 1036  GAACACACAATAGAAGAGTGGAAAGAATTGATATATAAGGAAGTTATGGACTTGGAGGAGAGAACCAAGAATGG  1109

Query  789  TGTAGTAAAAGGACAGCCTTCTCCTT-----CAGGTGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTC  857
            .||..||...||.|||||.|||||||     ||||||||||||                               
Sbjct 1110  AGTTATACGGGGGCAGCCCTCTCCTTTAGCACAGGTGCAGCAG-------------------------------  1152

Query  858  GTCTGTCAATGACATCTCCTCCATGTCCACCGACCAGACCCTGGCATCTGACACTGACAGCAGCCTGGAAGCCT  931
                                                                                      
Sbjct 1153  --------------------------------------------------------------------------  1152

Query  932  CGGCAGGACCCCTGGGTTGTTGCAGG  957
                                      
Sbjct 1153  --------------------------  1152

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