Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11124
Subject:
NR_003264.2
Aligned Length:
2593
Identities:
1489
Gaps:
1039

Alignment

Query    1  ---------------------ATGTCGGGGGTCCGGGGCCTGTCGCGGCTGCTGAGCGCTCGGCGC------CT  47
                                 .||||||||||||||||||||||||||.|||..||||||||||||      ||
Sbjct    1  TGCGCGGCGGCGACTACAGACGTGTCGGGGGTCCGGGGCCTGTCGCGGTTGCCAAGCGCTCGGCGCCTGGCGCT  74

Query   48  GGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACA  121
            |||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||| .|||||.
Sbjct   75  GGCGCTGGCCAAGGCGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTGTTCACTTCACTGTTGA-AGGAACG  147

Query  122  AGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTG  195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  148  AGAGGGCATCTGCTAAAGTTTCAGATTCCATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTG  221

Query  196  GTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACAGCATGTG  268
            ||||||||||||||||||||.||| |||||||||||||||||||||||.|||||||.||||.||||||||||||
Sbjct  222  GTGGTAGGCGCTGGAGGGGCCGGCTTTGCGAGCTGCATTTGGCCTTTCCGAGGCAGAGTTTGATACAGCATGTG  295

Query  269  TTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAGGGAGGAATCAATGCTGCTCTGGGGAACATG  342
            |||||||||||||||||||||||||||||||||||||||||||||..|||||||||||||||||||||||||||
Sbjct  296  TTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAGGTTGGAATCAATGCTGCTCTGGGGAACATG  369

Query  343  GAGGAGGACAACTGGAGGTGGCATTTCTA---------------------------------------------  371
            |||||||||||||||||||||||||||||                                             
Sbjct  370  GAGGAGGACAACTGGAGGTGGCATTTCTATGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCAT  443

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  444  CCACTACGTGACGGAGCAGGCCCCCACTGCCATGGTCGCGGTGATGGGCGGGAGGCTCTGGGTGCTCTGGTGGT  517

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  518  CTGTTTCTAGTACAAGAGTCCTGGAAAAAATGTAAGCAGTTGAGGCAGATGTGGCAGCCGAAAGAATGGTAGAA  591

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  592  AATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCGGACACAGCCTCAA  665

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  666  GTTTGGAAAGGGCGGGCAGGCCCATGGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATATTGCACACCT  739

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  740  TATACGGGAGGTCTCTGCGATATGATACCAGCTGTTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAAT  813

Query  372  --------------------------------------------------------------------------  371
                                                                                      
Sbjct  814  GGGGAGTGCCGTGGTGTCTTCGCACTGTGCATACAGGACGGGTCCATCCATCGCATAAGAGCAAAGAATACTAT  887

Query  372  ----------------------------------------------CGACACCAGCACTGGCGACGGCACGGCC  399
                                                          |.||||||||||..||||||||||||||
Sbjct  888  TGTTGCCACAGGGCTACTGGCGCAACTACTTGAGCTGCACGTCTGCCCACACCAGCACCAGCGACGGCACGGCC  961

Query  400  ATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTTCCACCCCACAGGCATATATGGTGC  473
            |||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||.|||||||||
Sbjct  962  ATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTTCAGTTCCACCCCACAGGCACATATGGTGC  1035

Query  474  TGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGG  547
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  TGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGG  1109

Query  548  AGCGATACGCCCCTGTCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTGGAGATCCGA  621
            |||||||||||||..|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||.
Sbjct 1110  AGCGATACGCCCCCATCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTGGATGACTCTGGAGATCCGC  1183

Query  622  GAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTGGC  695
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  GAAGGAAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTGGC  1257

Query  696  CACGCGCCTGCCTGGCATTTCAGAGACAGCCATGATCTTTGCTGGCGTGGACGTCACGAAGGAGCCGATCCCTG  769
            ||.||.|.||||.||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||
Sbjct 1258  CATGCCCTTGCCCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCGATCCCTG  1331

Query  770  TCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTCCTGAGGCACGTGAAT  843
            |||||||||||||||||||||||||||.||||||||||||||.||||.|||||||||||||||||||||.||||
Sbjct 1332  TCCTCCCCACCGTGCATTATAACATGGACGGCATTCCCACCAGCTACGAGGGGCAGGTCCTGAGGCACGGGAAT  1405

Query  844  GGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCG  917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.||||||||.||||||
Sbjct 1406  GGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCTGCACATGGTGTCAACCG  1479

Query  918  CCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCATGCA  991
            ||||||||||||||||||.|||||||||||||||  |||||.||||||||||||||||||||.||||||.||||
Sbjct 1480  CCTCGGGGCAAACTCGCTATTGGACCTGGTTGTC--TGGTCAGGCATGTGCCCTGAGCATCGCAGAGTCGTGCA  1551

Query  992  GGCCTGGAGATAAAGTCCCTCCAATTAAACCAAACGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGA  1065
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||.||||.||||||||||||||
Sbjct 1552  GGCCTGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCACGAATGTTGACAAATTGAGA  1625

Query 1066  TTTGCTGATG---GAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAG--------------------  1116
            ||||||||||   |||||||||||||||||||||||||||||||||||||||||                    
Sbjct 1626  TTTGCTGATGGAAGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGGGCTGCTGGCTCGTGTCACG  1699

Query 1117  --------------------------------------------------------------------------  1116
                                                                                      
Sbjct 1700  TTCACCACCAGACCCCACATCAGGAGTCCCGCCAGGGGTGTGGGGAGGCAGCGCTGCCTGGTTGGCCGTGGAGC  1773

Query 1117  -------------------------------------------------------------------------T  1117
                                                                                     |
Sbjct 1774  CGTATGGAACATGGTGCCTCACAGGCAGTCTGCTTGGCGTCCTGGATCCTGGCTGTATCCCGCTGGAAAGGATT  1847

Query 1118  CAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGCTC  1191
            |||.||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 1848  CAACGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCTTGTTGCAAGAAGGTTGTGGGAAAATCAGCAAGCTC  1921

Query 1192  TATGGAGACCTAAAGCACCTGAAGACGTTCGACCGGGGAATGGTCTGGAACACAGACCTGGTGGAGACCCTGGA  1265
            |||||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1922  TATGGAGACCTGAAGCATCTGAAGACGTTTGACCGGGGAATGGTCTGGAACACGGACCTGGTGGAGACCCTGGA  1995

Query 1266  GCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGCGC  1339
            ||||||||||||||||||.|||||||||||||||.||.|.||||||||||||.|||||||||||||||||||||
Sbjct 1996  GCTGCAGAACCTGATGCTATGTGCGCTGCAGACCGTCAATGGAGCAGAGGCGGGGAAGGAGTCACGGGGCGCGC  2069

Query 1340  ATGCCAGGGAAGACTACAAGGTGCGGATTGATGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAG  1413
            |.|||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 2070  ACGCCGGGGAAGACTACAAGGTGCGGATTGATGAGTACGATCACTCCAAGCCCATCCAGGGGCAACAGAAGAAG  2143

Query 1414  CCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTTTGTGGACGTTGGCACTGGGAAGGTCACTCTGGAATA  1487
            |||||||||||||||||||||||||||||||||||||.|||||||||..|||||||||||||||||.|||||||
Sbjct 2144  CCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTCAGCACTGGGAAGGTCACTGTGGAATA  2217

Query 1488  TAGACCCGTAATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCGCCAGCCATTCGCTCCTAC----  1557
            |||||||.|||||||||||||||||||.|||||||||||||||||.|||||.||||||||||.|||||||    
Sbjct 2218  TAGACCCATAATCGACAAAACTTTGAATGAGGCTGACTGTGCCACTGTCCCCCCAGCCATTCACTCCTACTGAT  2291

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2292  GAGACAAGATGCGGTGATGACAGAATCAGCTTTTTGCACAGCCAGAGAACAACACATCACACACAAGAAACAGT  2365

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2366  TGTGCTCATGTGATGGGGGCCTCAGCACTAGGAAGGAGTGGACTGTTGGCGCACGCAGCAGCTTGAATAAATCT  2439

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2440  GAAAGTCACTACGCTGCGTAAGAGAAGCCAAATAAAGCGCATGCTGTGTACAAAAAAAAAAAAAAAAAAAAAAA  2513

Query 1558  --------------------------------------------------------------------------  1557
                                                                                      
Sbjct 2514  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  2587

Query 1558  ---  1557
               
Sbjct 2588  AAA  2590

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