Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11149
Subject:
XM_006506933.3
Aligned Length:
2292
Identities:
1743
Gaps:
366

Alignment

Query    1  ---------------------------------------ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGA  35
                                                   |||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTTACTGACCCTGATTTACCTCAGGAGTTTGAAAGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGA  74

Query   36  AGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCT  109
            ..||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||||||||||||
Sbjct   75  GACAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAGGAGGAGAGTGAGAGGCTCCCAGCCT  148

Query  110  TTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACG  183
            |||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TTCACCTTCCCTTACATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACG  222

Query  184  CAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTC  257
            ||||||||||||||.|.||||||.||||||...||||||||.|||||||||||.||||||||||||||||||||
Sbjct  223  CAAGAGACTTGTGGTCCTAGGACCCCCACTGTGCAGCACAACACAATGGAAGTCGATGGCAATAAAGTTATGTC  296

Query  258  TTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCT  331
            ||||||.||.|||.||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||.
Sbjct  297  TTCATTAGCTCCATACAACTCATCTACCTCACCTCAGAAGGCGGAAGAAGGTGGGCGACAGAGTGGCGAGTCCG  370

Query  332  TGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAG  405
            ||||.||..||||||||||.|||||.||.||||||||||||||.|||||.|||||.||.||||||.||||||||
Sbjct  371  TGTCGAGCGCAGCCCTGGGGACTCCCGAGCGGCGCAAGGGCAGCTTAGCGGATGTGGTGGACACCCTGAAGCAG  444

Query  406  AGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCTCAAAGGACTG  479
            |||||.|||||||||||.|||||.||.|||||.|||||.||.||||||||||||||.||||||||.||||||||
Sbjct  445  AGGAAGATGGAAGAGCTGATCAAGAATGAGCCAGAAGACACTCCCAGTATTGAAAAGCTACTCTCCAAGGACTG  518

Query  480  GAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGA  553
            ||||||||||||.||.|||||||||||.|||||||||||.|||||||||||||||||.||||||.|.|||||||
Sbjct  519  GAAAGACAAGCTCCTGGCAATGGGATCAGGGAACTTTGGAGAAATAAAAGGGACTCCTGAGAGCCTCGCTGAGA  592

Query  554  AAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAG  627
            |.||..||||.|||||||||||||||||.|||||||||||.||.||.|||||.||..|||||||||||||||||
Sbjct  593  AGGAGCGGCAGCTCATGGGTATGATCAATCAGCTGACCAGTCTACGGGAGCAACTCCTGGCTGCCCACGATGAG  666

Query  628  CAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACA  701
            ||||||||..|.|||||.||||||||.|||||||||||||||||.|||||||||||||||||||||||.||.||
Sbjct  667  CAGAAGAAGTTGGCTGCATCTCAGATAGAGAAACAGCGTCAGCAGATGGAGCTGGCCAAGCAGCAACAGGAGCA  740

Query  702  AATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATC---CAGG  772
            .||.||.||.||.||||||||||||||.||||||||||||||||||||.|||||.||||||||||||   ||||
Sbjct  741  GATCGCGAGGCAACAGCAGCAGCTTCTGCAGCAACAACACAAAATCAACTTGCTTCAGCAACAGATCCAGCAGG  814

Query  773  TTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAG  846
            ||||||||||||||||||||||.|||||||||||.|||||||||||.||.|||||.||.||.||||||||||||
Sbjct  815  TTCAAGGTCAGCTGCCGCCATTGATGATTCCCGTGTTCCCTCCTGACCAGCGGACCCTCGCAGCAGCTGCCCAG  888

Query  847  CAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCC  920
            ||||||||||||||.|||||.||.||||||||.||||||||.||.|||||||||||||||||||||||||||||
Sbjct  889  CAAGGATTCCTCCTTCCTCCTGGTTTCAGCTACAAGGCTGGGTGCAGTGACCCTTACCCTGTTCAGCTGATCCC  962

Query  921  AACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGCAGTTATATGCTGCCC  994
            |||.||.||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||.||||||||||
Sbjct  963  AACCACTATGGCAGCTGCTGCTGCAGCAACACCAGGCTTAGGCCCACTCCAGCTGCAGCAGTTCTATGCTGCCC  1036

Query  995  AGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTA  1068
            |||||||.|||||||||||.|||||||||||||||||.|.||||.|||||||||||||||||||||||||.||.
Sbjct 1037  AGCTAGCCGCAATGCAGGTTTCTCCAGGAGGGAAGCTCCTAGGCCTACCCCAAGGCAACCTTGGTGCTGCCGTG  1110

Query 1069  TCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGCCCACCACCCAAAAGC--------------------  1122
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||                    
Sbjct 1111  TCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGTCCACCACCCAAAAGCAAGGATGAAGTGGCCCAGCC  1184

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1185  ACTGAACCTATCAGCTAAGCCCAAGACCTCTGATGGCAAATCACCTGCATCACCCACCTCTCCTCACATGCCAG  1258

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1259  CTCTGAGAATAAACAGTGGGGCTGGCCCCCTCAAAGCCTCTGTCCCGGCAGCATTAGCTAGTCCTTCTGCAAGA  1332

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1333  GTTAGCACAATAGGCTATTTAAATGACCACGATGCTGTCACCAAGGCAATCCAAGAAGCTCGCCAGATGAAAGA  1406

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1407  GCAACTCAGGCGAGAGCAGCAAGCGTTGGACGGGAAGGTGGCCGTGGTGAACAGCATAGGTCTCAGCAACTGCC  1480

Query 1123  --------AAGGAAAAAACAACACTGGAGAGTCTGACTCAGCAACTGGCAGTTAAACAGAATGAAGAAGGAAAA  1188
                    |||||||||||||||||||||||.|||||||||||..|||||||||||||||||||||||||.|||
Sbjct 1481  GGACAGAAAAGGAAAAAACAACACTGGAGAGCCTGACTCAGCAGTTGGCAGTTAAACAGAATGAAGAAGGGAAA  1554

Query 1189  TTTAGCCATGCAATGATGGATTTCAATCTGAGTGGAGATTCTGATGGAAGTGCTGGAGTCTCAGAGTCAAGAAT  1262
            ||||||||||.||||||||||||||||.||||||||||||||||.|||||.|||||||||||||||||||||||
Sbjct 1555  TTTAGCCATGGAATGATGGATTTCAATATGAGTGGAGATTCTGACGGAAGCGCTGGAGTCTCAGAGTCAAGAAT  1628

Query 1263  TTATAGGGAATCCCGAGGGCGTGGTAGCAATGAACCCCACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGG  1336
            |||.|||||||||.|.||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TTACAGGGAATCCAGGGGACGTGGTAGCAACGAGCCCCACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGG  1702

Query 1337  CTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCTGACATGCACAACTCCAACATCAGCAAGATATTGGGA  1410
            |.||||||||||||||.||.||||||||.||||||||.|||||||||||.||||||||||||||||||.|||||
Sbjct 1703  CGAAAGATGAACGGAGGAAAATCCTTCAGGCCTTTCCCGACATGCACAATTCCAACATCAGCAAGATACTGGGA  1776

Query 1411  TCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCCATATTATGAGGAGCAAGCCCGTCTCAGCAAGCAGCA  1484
            ||||||||||||||||||||.||||||||||||||||||||.|||||||||||.|||||.||||||||.|||||
Sbjct 1777  TCTCGCTGGAAAGCTATGACCAACCTAGAGAAACAGCCATACTATGAGGAGCAGGCCCGCCTCAGCAAACAGCA  1850

Query 1485  CCTGGAGAAGTACCCTGACTATAAGTACAAGCCCAGGCCAAAGCGCACCTGCCTGGTGGATGGCAAAAAGCTGC  1558
            |||||||||||||||.|||||.|||||||||||.|||||||||||||||||.||||||||.|||||.||.||||
Sbjct 1851  CCTGGAGAAGTACCCGGACTACAAGTACAAGCCTAGGCCAAAGCGCACCTGTCTGGTGGACGGCAAGAAACTGC  1924

Query 1559  GCATTGGTGAATACAAGGCAATCATGCGCAACAGGCGGCAGGAAATGCGGCAGTACTTCAATGTTGGGCAACAA  1632
            |.||.||.||.||||||||.||||||||.|||.||.|||||||||||||.|||||||||||.||||||||||||
Sbjct 1925  GTATCGGGGAGTACAAGGCCATCATGCGGAACCGGAGGCAGGAAATGCGACAGTACTTCAACGTTGGGCAACAA  1998

Query 1633  GCACAGATCCCCATTGCCACTGCTGGTGTTGTGTACCCTGGAGCCATCGCCATGGCTGGGATGCCCTCCCCTCA  1706
            ||||||||||||||.||.||.||.||.|||||.|||||..|.||||||||||||||.||.|||||.||||||||
Sbjct 1999  GCACAGATCCCCATCGCGACGGCCGGAGTTGTATACCCCAGCGCCATCGCCATGGCAGGAATGCCGTCCCCTCA  2072

Query 1707  CCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAGAGCCTGGGATGCCTGTTATCCAGAGCACTTACGGTG  1780
            |||||||||.||||||||.||||||||.||||||||.|||||.||||||||.||.|||||||||||||||||.|
Sbjct 2073  CCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGCCCGGAGCCCGGGATGCCCGTGATCCAGAGCACTTACGGCG  2146

Query 1781  TGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAGGCCGAGGACATCAATGGAGAAATTTATGATGAGTAC  1854
            ..||.|||||||||||.||.|||||.||||||||.|||||.|||||||||||.|||||.|||||.||.||||||
Sbjct 2147  CCAAGGGAGAGGAGCCCCACATCAAGGAAGAGATCCAGGCTGAGGACATCAACGGAGAGATTTACGAGGAGTAC  2220

Query 1855  GACGAGGAAGAGGATGATCCAGATGTAGATTATGGGAGTGACAGTGAAAACCATATTGCAGGACAAGCCAAC  1926
            ||.|||||.|||||.||.||.|||||.|||||||||||||||||.||||||||.|||||.||||||||||||
Sbjct 2221  GATGAGGAGGAGGAGGACCCGGATGTGGATTATGGGAGTGACAGCGAAAACCACATTGCGGGACAAGCCAAC  2292

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