Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11149
Subject:
XM_006506935.3
Aligned Length:
2373
Identities:
1645
Gaps:
552

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAGATACCTGCTCTCCTCCACGCCTGGTTTCTGGAGTTTGAAGCTACAGAAACTTTGCCTGGGTTGCCAGG  74

Query    1  -------------------------------------------------ATGTCTTCCAAGCGACCAGCCTCTC  25
                                                             |||||||||||||||||||||||||
Sbjct   75  ACATTCAGAGCACTTTGTGGAAAGCAAGCTAGCACTGAGCCGGACAGAGATGTCTTCCAAGCGACCAGCCTCTC  148

Query   26  CGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGG  99
            ||||||||||..||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||
Sbjct  149  CGTATGGGGAGACAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAGGAGGAGAGTGAGAGG  222

Query  100  CTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTC  173
            |||||||||||||||||||||||.|||                                               
Sbjct  223  CTCCCAGCCTTTCACCTTCCCTTACAT-----------------------------------------------  249

Query  174  TCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATA  247
                                                                      |||||.||||||||||
Sbjct  250  ----------------------------------------------------------GAAGTCGATGGCAATA  265

Query  248  AAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGT  321
            ||||||||||||||||.||.|||.||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  266  AAGTTATGTCTTCATTAGCTCCATACAACTCATCTACCTCACCTCAGAAGGCGGAAGAAGGTGGGCGACAGAGT  339

Query  322  GGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACAC  395
            |||||||||.||||.||..||||||||||.|||||.||.||||||||||||||.|||||.|||||.||.|||||
Sbjct  340  GGCGAGTCCGTGTCGAGCGCAGCCCTGGGGACTCCCGAGCGGCGCAAGGGCAGCTTAGCGGATGTGGTGGACAC  413

Query  396  CTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCT  469
            |.|||||||||||||.|||||||||||.|||||.||.|||||.|||||.||.||||||||||||||.|||||||
Sbjct  414  CCTGAAGCAGAGGAAGATGGAAGAGCTGATCAAGAATGAGCCAGAAGACACTCCCAGTATTGAAAAGCTACTCT  487

Query  470  CAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAGAGC  543
            |.||||||||||||||||||||.||.|||||||||||.|||||||||||.|||||||||||||||||.||||||
Sbjct  488  CCAAGGACTGGAAAGACAAGCTCCTGGCAATGGGATCAGGGAACTTTGGAGAAATAAAAGGGACTCCTGAGAGC  561

Query  544  TTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGC  617
            .|.||||||||.||..||||.|||||||||||||||||.|||||||||||.||.||.|||||.||..|||||||
Sbjct  562  CTCGCTGAGAAGGAGCGGCAGCTCATGGGTATGATCAATCAGCTGACCAGTCTACGGGAGCAACTCCTGGCTGC  635

Query  618  CCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGC  691
            ||||||||||||||||||..|.|||||.||||||||.|||||||||||||||||.|||||||||||||||||||
Sbjct  636  CCACGATGAGCAGAAGAAGTTGGCTGCATCTCAGATAGAGAAACAGCGTCAGCAGATGGAGCTGGCCAAGCAGC  709

Query  692  AACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAG  765
            ||||.||.||.||.||.||.||.||||||||||||||.||||||||||||||||||||.|||||.|||||||||
Sbjct  710  AACAGGAGCAGATCGCGAGGCAACAGCAGCAGCTTCTGCAGCAACAACACAAAATCAACTTGCTTCAGCAACAG  783

Query  766  ATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGGACACTGGCTGCAGC  839
            |||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||.|||||.||.||.|||||
Sbjct  784  ATCCAGGTTCAAGGTCAGCTGCCGCCATTGATGATTCCCGTGTTCCCTCCTGACCAGCGGACCCTCGCAGCAGC  857

Query  840  TGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGC  913
            |||||||||||||||||||||.|||||.||.||||||||.||||||||.||.||||||||||||||||||||||
Sbjct  858  TGCCCAGCAAGGATTCCTCCTTCCTCCTGGTTTCAGCTACAAGGCTGGGTGCAGTGACCCTTACCCTGTTCAGC  931

Query  914  TGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGCAGTTATAT  987
            ||||||||||.||.||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||.|||
Sbjct  932  TGATCCCAACCACTATGGCAGCTGCTGCTGCAGCAACACCAGGCTTAGGCCCACTCCAGCTGCAGCAGTTCTAT  1005

Query  988  GCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGC  1061
            ||||||||||||||.|||||||||||.|||||||||||||||||.|.||||.||||||||||||||||||||||
Sbjct 1006  GCTGCCCAGCTAGCCGCAATGCAGGTTTCTCCAGGAGGGAAGCTCCTAGGCCTACCCCAAGGCAACCTTGGTGC  1079

Query 1062  TGCTGTATCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGCCCACCACCCAAAAGC-------------  1122
            |||.||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||             
Sbjct 1080  TGCCGTGTCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGTCCACCACCCAAAAGCAAGGATGAAGTGG  1153

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1154  CCCAGCCACTGAACCTATCAGCTAAGCCCAAGACCTCTGATGGCAAATCACCTGCATCACCCACCTCTCCTCAC  1227

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1228  ATGCCAGCTCTGAGAATAAACAGTGGGGCTGGCCCCCTCAAAGCCTCTGTCCCGGCAGCATTAGCTAGTCCTTC  1301

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1302  TGCAAGAGTTAGCACAATAGGCTATTTAAATGACCACGATGCTGTCACCAAGGCAATCCAAGAAGCTCGCCAGA  1375

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1376  TGAAAGAGCAACTCAGGCGAGAGCAGCAAGCGTTGGACGGGAAGGTGGCCGTGGTGAACAGCATAGGTCTCAGC  1449

Query 1123  ---------------AAGGAAAAAACAACACTGGAGAGTCTGACTCAGCAACTGGCAGTTAAACAGAATGAAGA  1181
                           |||||||||||||||||||||||.|||||||||||..||||||||||||||||||||||
Sbjct 1450  AACTGCCGGACAGAAAAGGAAAAAACAACACTGGAGAGCCTGACTCAGCAGTTGGCAGTTAAACAGAATGAAGA  1523

Query 1182  AGGAAAATTTAGCCATGCAATGATGGATTTCAATCTGAGTGGAGATTCTGATGGAAGTGCTGGAGTCTCAGAGT  1255
            |||.|||||||||||||.||||||||||||||||.||||||||||||||||.|||||.||||||||||||||||
Sbjct 1524  AGGGAAATTTAGCCATGGAATGATGGATTTCAATATGAGTGGAGATTCTGACGGAAGCGCTGGAGTCTCAGAGT  1597

Query 1256  CAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATGAACCCCACATAAAGCGTCCAATGAATGCCTTCATG  1329
            ||||||||||.|||||||||.|.||.|||||||||||.||.|||||||||||||||||||||||||||||||||
Sbjct 1598  CAAGAATTTACAGGGAATCCAGGGGACGTGGTAGCAACGAGCCCCACATAAAGCGTCCAATGAATGCCTTCATG  1671

Query 1330  GTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCTGACATGCACAACTCCAACATCAGCAAGAT  1403
            ||||||||.||||||||||||||.||.||||||||.||||||||.|||||||||||.|||||||||||||||||
Sbjct 1672  GTGTGGGCGAAAGATGAACGGAGGAAAATCCTTCAGGCCTTTCCCGACATGCACAATTCCAACATCAGCAAGAT  1745

Query 1404  ATTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCCATATTATGAGGAGCAAGCCCGTCTCAGCA  1477
            |.|||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.|||||.|||||||
Sbjct 1746  ACTGGGATCTCGCTGGAAAGCTATGACCAACCTAGAGAAACAGCCATACTATGAGGAGCAGGCCCGCCTCAGCA  1819

Query 1478  AGCAGCACCTGGAGAAGTACCCTGACTATAAGTACAAGCCCAGGCCAAAGCGCACCTGCCTGGTGGATGGCAAA  1551
            |.||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||.||||||||.|||||.
Sbjct 1820  AACAGCACCTGGAGAAGTACCCGGACTACAAGTACAAGCCTAGGCCAAAGCGCACCTGTCTGGTGGACGGCAAG  1893

Query 1552  AAGCTGCGCATTGGTGAATACAAGGCAATCATGCGCAACAGGCGGCAGGAAATGCGGCAGTACTTCAATGTTGG  1625
            ||.|||||.||.||.||.||||||||.||||||||.|||.||.|||||||||||||.|||||||||||.|||||
Sbjct 1894  AAACTGCGTATCGGGGAGTACAAGGCCATCATGCGGAACCGGAGGCAGGAAATGCGACAGTACTTCAACGTTGG  1967

Query 1626  GCAACAAGCACAGATCCCCATTGCCACTGCTGGTGTTGTGTACCCTGGAGCCATCGCCATGGCTGGGATGCCCT  1699
            |||||||||||||||||||||.||.||.||.||.|||||.|||||..|.||||||||||||||.||.|||||.|
Sbjct 1968  GCAACAAGCACAGATCCCCATCGCGACGGCCGGAGTTGTATACCCCAGCGCCATCGCCATGGCAGGAATGCCGT  2041

Query 1700  CCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAGAGCCTGGGATGCCTGTTATCCAGAGCACT  1773
            ||||||||||||||||.||||||||.||||||||.||||||||.|||||.||||||||.||.||||||||||||
Sbjct 2042  CCCCTCACCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGCCCGGAGCCCGGGATGCCCGTGATCCAGAGCACT  2115

Query 1774  TACGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAGGCCGAGGACATCAATGGAGAAATTTATGA  1847
            |||||.|..||.|||||||||||.||.|||||.||||||||.|||||.|||||||||||.|||||.|||||.||
Sbjct 2116  TACGGCGCCAAGGGAGAGGAGCCCCACATCAAGGAAGAGATCCAGGCTGAGGACATCAACGGAGAGATTTACGA  2189

Query 1848  TGAGTACGACGAGGAAGAGGATGATCCAGATGTAGATTATGGGAGTGACAGTGAAAACCATATTGCAGGACAAG  1921
            .||||||||.|||||.|||||.||.||.|||||.|||||||||||||||||.||||||||.|||||.|||||||
Sbjct 2190  GGAGTACGATGAGGAGGAGGAGGACCCGGATGTGGATTATGGGAGTGACAGCGAAAACCACATTGCGGGACAAG  2263

Query 1922  CCAAC  1926
            |||||
Sbjct 2264  CCAAC  2268

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