Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11149
Subject:
XM_006506939.3
Aligned Length:
2292
Identities:
1645
Gaps:
471

Alignment

Query    1  ---------------------------------------ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGA  35
                                                   |||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTTACTGACCCTGATTTACCTCAGGAGTTTGAAAGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGA  74

Query   36  AGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCT  109
            ..||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||||||||||||
Sbjct   75  GACAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAGGAGGAGAGTGAGAGGCTCCCAGCCT  148

Query  110  TTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACG  183
            |||||||||||||.|||                                                         
Sbjct  149  TTCACCTTCCCTTACAT---------------------------------------------------------  165

Query  184  CAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTC  257
                                                            |||||.||||||||||||||||||||
Sbjct  166  ------------------------------------------------GAAGTCGATGGCAATAAAGTTATGTC  191

Query  258  TTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCT  331
            ||||||.||.|||.||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||.
Sbjct  192  TTCATTAGCTCCATACAACTCATCTACCTCACCTCAGAAGGCGGAAGAAGGTGGGCGACAGAGTGGCGAGTCCG  265

Query  332  TGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAG  405
            ||||.||..||||||||||.|||||.||.||||||||||||||.|||||.|||||.||.||||||.||||||||
Sbjct  266  TGTCGAGCGCAGCCCTGGGGACTCCCGAGCGGCGCAAGGGCAGCTTAGCGGATGTGGTGGACACCCTGAAGCAG  339

Query  406  AGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCTCAAAGGACTG  479
            |||||.|||||||||||.|||||.||.|||||.|||||.||.||||||||||||||.||||||||.||||||||
Sbjct  340  AGGAAGATGGAAGAGCTGATCAAGAATGAGCCAGAAGACACTCCCAGTATTGAAAAGCTACTCTCCAAGGACTG  413

Query  480  GAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGA  553
            ||||||||||||.||.|||||||||||.|||||||||||.|||||||||||||||||.||||||.|.|||||||
Sbjct  414  GAAAGACAAGCTCCTGGCAATGGGATCAGGGAACTTTGGAGAAATAAAAGGGACTCCTGAGAGCCTCGCTGAGA  487

Query  554  AAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAG  627
            |.||..||||.|||||||||||||||||.|||||||||||.||.||.|||||.||..|||||||||||||||||
Sbjct  488  AGGAGCGGCAGCTCATGGGTATGATCAATCAGCTGACCAGTCTACGGGAGCAACTCCTGGCTGCCCACGATGAG  561

Query  628  CAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACA  701
            ||||||||..|.|||||.||||||||.|||||||||||||||||.|||||||||||||||||||||||.||.||
Sbjct  562  CAGAAGAAGTTGGCTGCATCTCAGATAGAGAAACAGCGTCAGCAGATGGAGCTGGCCAAGCAGCAACAGGAGCA  635

Query  702  AATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATC---CAGG  772
            .||.||.||.||.||||||||||||||.||||||||||||||||||||.|||||.||||||||||||   ||||
Sbjct  636  GATCGCGAGGCAACAGCAGCAGCTTCTGCAGCAACAACACAAAATCAACTTGCTTCAGCAACAGATCCAGCAGG  709

Query  773  TTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAG  846
            ||||||||||||||||||||||.|||||||||||.|||||||||||.||.|||||.||.||.||||||||||||
Sbjct  710  TTCAAGGTCAGCTGCCGCCATTGATGATTCCCGTGTTCCCTCCTGACCAGCGGACCCTCGCAGCAGCTGCCCAG  783

Query  847  CAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCC  920
            ||||||||||||||.|||||.||.||||||||.||||||||.||.|||||||||||||||||||||||||||||
Sbjct  784  CAAGGATTCCTCCTTCCTCCTGGTTTCAGCTACAAGGCTGGGTGCAGTGACCCTTACCCTGTTCAGCTGATCCC  857

Query  921  AACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGCAGTTATATGCTGCCC  994
            |||.||.||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||.||||||||||
Sbjct  858  AACCACTATGGCAGCTGCTGCTGCAGCAACACCAGGCTTAGGCCCACTCCAGCTGCAGCAGTTCTATGCTGCCC  931

Query  995  AGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGCCAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTA  1068
            |||||||.|||||||||||.|||||||||||||||||.|.||||.|||||||||||||||||||||||||.||.
Sbjct  932  AGCTAGCCGCAATGCAGGTTTCTCCAGGAGGGAAGCTCCTAGGCCTACCCCAAGGCAACCTTGGTGCTGCCGTG  1005

Query 1069  TCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGCCCACCACCCAAAAGC--------------------  1122
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||                    
Sbjct 1006  TCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGTCCACCACCCAAAAGCAAGGATGAAGTGGCCCAGCC  1079

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1080  ACTGAACCTATCAGCTAAGCCCAAGACCTCTGATGGCAAATCACCTGCATCACCCACCTCTCCTCACATGCCAG  1153

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1154  CTCTGAGAATAAACAGTGGGGCTGGCCCCCTCAAAGCCTCTGTCCCGGCAGCATTAGCTAGTCCTTCTGCAAGA  1227

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1228  GTTAGCACAATAGGCTATTTAAATGACCACGATGCTGTCACCAAGGCAATCCAAGAAGCTCGCCAGATGAAAGA  1301

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1302  GCAACTCAGGCGAGAGCAGCAAGCGTTGGACGGGAAGGTGGCCGTGGTGAACAGCATAGGTCTCAGCAACTGCC  1375

Query 1123  --------AAGGAAAAAACAACACTGGAGAGTCTGACTCAGCAACTGGCAGTTAAACAGAATGAAGAAGGAAAA  1188
                    |||||||||||||||||||||||.|||||||||||..|||||||||||||||||||||||||.|||
Sbjct 1376  GGACAGAAAAGGAAAAAACAACACTGGAGAGCCTGACTCAGCAGTTGGCAGTTAAACAGAATGAAGAAGGGAAA  1449

Query 1189  TTTAGCCATGCAATGATGGATTTCAATCTGAGTGGAGATTCTGATGGAAGTGCTGGAGTCTCAGAGTCAAGAAT  1262
            ||||||||||.||||||||||||||||.||||||||||||||||.|||||.|||||||||||||||||||||||
Sbjct 1450  TTTAGCCATGGAATGATGGATTTCAATATGAGTGGAGATTCTGACGGAAGCGCTGGAGTCTCAGAGTCAAGAAT  1523

Query 1263  TTATAGGGAATCCCGAGGGCGTGGTAGCAATGAACCCCACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGG  1336
            |||.|||||||||.|.||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1524  TTACAGGGAATCCAGGGGACGTGGTAGCAACGAGCCCCACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGG  1597

Query 1337  CTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCTGACATGCACAACTCCAACATCAGCAAGATATTGGGA  1410
            |.||||||||||||||.||.||||||||.||||||||.|||||||||||.||||||||||||||||||.|||||
Sbjct 1598  CGAAAGATGAACGGAGGAAAATCCTTCAGGCCTTTCCCGACATGCACAATTCCAACATCAGCAAGATACTGGGA  1671

Query 1411  TCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCCATATTATGAGGAGCAAGCCCGTCTCAGCAAGCAGCA  1484
            ||||||||||||||||||||.||||||||||||||||||||.|||||||||||.|||||.||||||||.|||||
Sbjct 1672  TCTCGCTGGAAAGCTATGACCAACCTAGAGAAACAGCCATACTATGAGGAGCAGGCCCGCCTCAGCAAACAGCA  1745

Query 1485  CCTGGAGAAGTACCCTGACTATAAGTACAAGCCCAGGCCAAAGCGCACCTGCCTGGTGGATGGCAAAAAGCTGC  1558
            |||||||||||||||.|||||.|||||||||||.|||||||||||||||||.||||||||.|||||.||.||||
Sbjct 1746  CCTGGAGAAGTACCCGGACTACAAGTACAAGCCTAGGCCAAAGCGCACCTGTCTGGTGGACGGCAAGAAACTGC  1819

Query 1559  GCATTGGTGAATACAAGGCAATCATGCGCAACAGGCGGCAGGAAATGCGGCAGTACTTCAATGTTGGGCAACAA  1632
            |.||.||.||.||||||||.||||||||.|||.||.|||||||||||||.|||||||||||.||||||||||||
Sbjct 1820  GTATCGGGGAGTACAAGGCCATCATGCGGAACCGGAGGCAGGAAATGCGACAGTACTTCAACGTTGGGCAACAA  1893

Query 1633  GCACAGATCCCCATTGCCACTGCTGGTGTTGTGTACCCTGGAGCCATCGCCATGGCTGGGATGCCCTCCCCTCA  1706
            ||||||||||||||.||.||.||.||.|||||.|||||..|.||||||||||||||.||.|||||.||||||||
Sbjct 1894  GCACAGATCCCCATCGCGACGGCCGGAGTTGTATACCCCAGCGCCATCGCCATGGCAGGAATGCCGTCCCCTCA  1967

Query 1707  CCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAGAGCCTGGGATGCCTGTTATCCAGAGCACTTACGGTG  1780
            |||||||||.||||||||.||||||||.||||||||.|||||.||||||||.||.|||||||||||||||||.|
Sbjct 1968  CCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGCCCGGAGCCCGGGATGCCCGTGATCCAGAGCACTTACGGCG  2041

Query 1781  TGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAGGCCGAGGACATCAATGGAGAAATTTATGATGAGTAC  1854
            ..||.|||||||||||.||.|||||.||||||||.|||||.|||||||||||.|||||.|||||.||.||||||
Sbjct 2042  CCAAGGGAGAGGAGCCCCACATCAAGGAAGAGATCCAGGCTGAGGACATCAACGGAGAGATTTACGAGGAGTAC  2115

Query 1855  GACGAGGAAGAGGATGATCCAGATGTAGATTATGGGAGTGACAGTGAAAACCATATTGCAGGACAAGCCAAC  1926
            ||.|||||.|||||.||.||.|||||.|||||||||||||||||.||||||||.|||||.||||||||||||
Sbjct 2116  GATGAGGAGGAGGAGGACCCGGATGTGGATTATGGGAGTGACAGCGAAAACCACATTGCGGGACAAGCCAAC  2187

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