Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11149
Subject:
XM_011241578.1
Aligned Length:
2253
Identities:
1743
Gaps:
327

Alignment

Query    1  ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAA  74
            |||||||||||||||||||||||||||||||||||..|||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAGACAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAA  74

Query   75  AGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTC  148
            |||||||||.|||||||||||..|||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct   75  AGTGGAAGAGGAGGAGAGTGAGAGGCTCCCAGCCTTTCACCTTCCCTTACATGTGAGTTTTCCCAACAAGCCTC  148

Query  149  ACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCAC  222
            |||||||||||||||||||||||||||||||||||||||||||||||||.|.||||||.||||||...||||||
Sbjct  149  ACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGTCCTAGGACCCCCACTGTGCAGCAC  222

Query  223  AATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAA  296
            ||.|||||||||||.||||||||||||||||||||||||||.||.|||.|||||||||||||||||||||||||
Sbjct  223  AACACAATGGAAGTCGATGGCAATAAAGTTATGTCTTCATTAGCTCCATACAACTCATCTACCTCACCTCAGAA  296

Query  297  GGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGG  370
            |||.||||||||||||||||||||||||||||||.||||.||..||||||||||.|||||.||.||||||||||
Sbjct  297  GGCGGAAGAAGGTGGGCGACAGAGTGGCGAGTCCGTGTCGAGCGCAGCCCTGGGGACTCCCGAGCGGCGCAAGG  370

Query  371  GCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAA  444
            ||||.|||||.|||||.||.||||||.|||||||||||||.|||||||||||.|||||.||.|||||.|||||.
Sbjct  371  GCAGCTTAGCGGATGTGGTGGACACCCTGAAGCAGAGGAAGATGGAAGAGCTGATCAAGAATGAGCCAGAAGAC  444

Query  445  ACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGG  518
            ||.||||||||||||||.||||||||.||||||||||||||||||||.||.|||||||||||.|||||||||||
Sbjct  445  ACTCCCAGTATTGAAAAGCTACTCTCCAAGGACTGGAAAGACAAGCTCCTGGCAATGGGATCAGGGAACTTTGG  518

Query  519  CGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCA  592
            .|||||||||||||||||.||||||.|.||||||||.||..||||.|||||||||||||||||.||||||||||
Sbjct  519  AGAAATAAAAGGGACTCCTGAGAGCCTCGCTGAGAAGGAGCGGCAGCTCATGGGTATGATCAATCAGCTGACCA  592

Query  593  GCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGT  666
            |.||.||.|||||.||..|||||||||||||||||||||||||..|.|||||.||||||||.||||||||||||
Sbjct  593  GTCTACGGGAGCAACTCCTGGCTGCCCACGATGAGCAGAAGAAGTTGGCTGCATCTCAGATAGAGAAACAGCGT  666

Query  667  CAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACA  740
            |||||.|||||||||||||||||||||||.||.||.||.||.||.||.||||||||||||||.|||||||||||
Sbjct  667  CAGCAGATGGAGCTGGCCAAGCAGCAACAGGAGCAGATCGCGAGGCAACAGCAGCAGCTTCTGCAGCAACAACA  740

Query  741  CAAAATCAATTTGCTCCAGCAACAGATC---CAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCC  811
            |||||||||.|||||.||||||||||||   ||||||||||||||||||||||||||.|||||||||||.||||
Sbjct  741  CAAAATCAACTTGCTTCAGCAACAGATCCAGCAGGTTCAAGGTCAGCTGCCGCCATTGATGATTCCCGTGTTCC  814

Query  812  CTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCT  885
            |||||||.||.|||||.||.||.||||||||||||||||||||||||||.|||||.||.||||||||.||||||
Sbjct  815  CTCCTGACCAGCGGACCCTCGCAGCAGCTGCCCAGCAAGGATTCCTCCTTCCTCCTGGTTTCAGCTACAAGGCT  888

Query  886  GGATGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTT  959
            ||.||.||||||||||||||||||||||||||||||||.||.||||||||||||||.|||||||||||||||||
Sbjct  889  GGGTGCAGTGACCCTTACCCTGTTCAGCTGATCCCAACCACTATGGCAGCTGCTGCTGCAGCAACACCAGGCTT  962

Query  960  AGGCCCACTCCAACTGCAGCAGTTATATGCTGCCCAGCTAGCTGCAATGCAGGTATCTCCAGGAGGGAAGCTGC  1033
            ||||||||||||.|||||||||||.|||||||||||||||||.|||||||||||.|||||||||||||||||.|
Sbjct  963  AGGCCCACTCCAGCTGCAGCAGTTCTATGCTGCCCAGCTAGCCGCAATGCAGGTTTCTCCAGGAGGGAAGCTCC  1036

Query 1034  CAGGCATACCCCAAGGCAACCTTGGTGCTGCTGTATCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGC  1107
            .||||.|||||||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||.
Sbjct 1037  TAGGCCTACCCCAAGGCAACCTTGGTGCTGCCGTGTCTCCTACCAGCATTCACACAGACAAGAGCACAAACAGT  1110

Query 1108  CCACCACCCAAAAGC-----------------------------------------------------------  1122
            |||||||||||||||                                                           
Sbjct 1111  CCACCACCCAAAAGCAAGGATGAAGTGGCCCAGCCACTGAACCTATCAGCTAAGCCCAAGACCTCTGATGGCAA  1184

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1185  ATCACCTGCATCACCCACCTCTCCTCACATGCCAGCTCTGAGAATAAACAGTGGGGCTGGCCCCCTCAAAGCCT  1258

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1259  CTGTCCCGGCAGCATTAGCTAGTCCTTCTGCAAGAGTTAGCACAATAGGCTATTTAAATGACCACGATGCTGTC  1332

Query 1123  --------------------------------------------------------------------------  1122
                                                                                      
Sbjct 1333  ACCAAGGCAATCCAAGAAGCTCGCCAGATGAAAGAGCAACTCAGGCGAGAGCAGCAAGCGTTGGACGGGAAGGT  1406

Query 1123  -------------------------------------------AAGGAAAAAACAACACTGGAGAGTCTGACTC  1153
                                                       |||||||||||||||||||||||.|||||||
Sbjct 1407  GGCCGTGGTGAACAGCATAGGTCTCAGCAACTGCCGGACAGAAAAGGAAAAAACAACACTGGAGAGCCTGACTC  1480

Query 1154  AGCAACTGGCAGTTAAACAGAATGAAGAAGGAAAATTTAGCCATGCAATGATGGATTTCAATCTGAGTGGAGAT  1227
            ||||..|||||||||||||||||||||||||.|||||||||||||.||||||||||||||||.|||||||||||
Sbjct 1481  AGCAGTTGGCAGTTAAACAGAATGAAGAAGGGAAATTTAGCCATGGAATGATGGATTTCAATATGAGTGGAGAT  1554

Query 1228  TCTGATGGAAGTGCTGGAGTCTCAGAGTCAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATGAACCCCA  1301
            |||||.|||||.||||||||||||||||||||||||||.|||||||||.|.||.|||||||||||.||.|||||
Sbjct 1555  TCTGACGGAAGCGCTGGAGTCTCAGAGTCAAGAATTTACAGGGAATCCAGGGGACGTGGTAGCAACGAGCCCCA  1628

Query 1302  CATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTTTCCTG  1375
            ||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||||||||.||||||||.|
Sbjct 1629  CATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCGAAAGATGAACGGAGGAAAATCCTTCAGGCCTTTCCCG  1702

Query 1376  ACATGCACAACTCCAACATCAGCAAGATATTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCCA  1449
            ||||||||||.||||||||||||||||||.|||||||||||||||||||||||||.||||||||||||||||||
Sbjct 1703  ACATGCACAATTCCAACATCAGCAAGATACTGGGATCTCGCTGGAAAGCTATGACCAACCTAGAGAAACAGCCA  1776

Query 1450  TATTATGAGGAGCAAGCCCGTCTCAGCAAGCAGCACCTGGAGAAGTACCCTGACTATAAGTACAAGCCCAGGCC  1523
            ||.|||||||||||.|||||.||||||||.||||||||||||||||||||.|||||.|||||||||||.|||||
Sbjct 1777  TACTATGAGGAGCAGGCCCGCCTCAGCAAACAGCACCTGGAGAAGTACCCGGACTACAAGTACAAGCCTAGGCC  1850

Query 1524  AAAGCGCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTGGTGAATACAAGGCAATCATGCGCAACAGGCGGC  1597
            ||||||||||||.||||||||.|||||.||.|||||.||.||.||.||||||||.||||||||.|||.||.|||
Sbjct 1851  AAAGCGCACCTGTCTGGTGGACGGCAAGAAACTGCGTATCGGGGAGTACAAGGCCATCATGCGGAACCGGAGGC  1924

Query 1598  AGGAAATGCGGCAGTACTTCAATGTTGGGCAACAAGCACAGATCCCCATTGCCACTGCTGGTGTTGTGTACCCT  1671
            ||||||||||.|||||||||||.||||||||||||||||||||||||||.||.||.||.||.|||||.|||||.
Sbjct 1925  AGGAAATGCGACAGTACTTCAACGTTGGGCAACAAGCACAGATCCCCATCGCGACGGCCGGAGTTGTATACCCC  1998

Query 1672  GGAGCCATCGCCATGGCTGGGATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGCCCAGA  1745
            .|.||||||||||||||.||.|||||.|||||||||||||||||.||||||||.||||||||.||||||||.||
Sbjct 1999  AGCGCCATCGCCATGGCAGGAATGCCGTCCCCTCACCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGCCCGGA  2072

Query 1746  GCCTGGGATGCCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGATACAGG  1819
            |||.||||||||.||.|||||||||||||||||.|..||.|||||||||||.||.|||||.||||||||.||||
Sbjct 2073  GCCCGGGATGCCCGTGATCCAGAGCACTTACGGCGCCAAGGGAGAGGAGCCCCACATCAAGGAAGAGATCCAGG  2146

Query 1820  CCGAGGACATCAATGGAGAAATTTATGATGAGTACGACGAGGAAGAGGATGATCCAGATGTAGATTATGGGAGT  1893
            |.|||||||||||.|||||.|||||.||.||||||||.|||||.|||||.||.||.|||||.||||||||||||
Sbjct 2147  CTGAGGACATCAACGGAGAGATTTACGAGGAGTACGATGAGGAGGAGGAGGACCCGGATGTGGATTATGGGAGT  2220

Query 1894  GACAGTGAAAACCATATTGCAGGACAAGCCAAC  1926
            |||||.||||||||.|||||.||||||||||||
Sbjct 2221  GACAGCGAAAACCACATTGCGGGACAAGCCAAC  2253

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