Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11149
Subject:
XM_011241582.1
Aligned Length:
2110
Identities:
1715
Gaps:
191

Alignment

Query    1  ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAA  74
            |||||||||||||||||||||||||||||||||||..|||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAGACAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAA  74

Query   75  AGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTC  148
            |||||||||.|||||||||||..|||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct   75  AGTGGAAGAGGAGGAGAGTGAGAGGCTCCCAGCCTTTCACCTTCCCTTACATGTGAGTTTTCCCAACAAGCCTC  148

Query  149  ACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCAC  222
            |||||||||||||||||||||||||||||||||||||||||||||||||.|.||||||.||||||...||||||
Sbjct  149  ACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGTCCTAGGACCCCCACTGTGCAGCAC  222

Query  223  AATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAA  296
            ||.|||||||||||.||||||||||||||||||||||||||.||.|||.|||||||||||||||||||||||||
Sbjct  223  AACACAATGGAAGTCGATGGCAATAAAGTTATGTCTTCATTAGCTCCATACAACTCATCTACCTCACCTCAGAA  296

Query  297  GGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGG  370
            |||.||||||||||||||||||||||||||||||.||||.||..||||||||||.|||||.||.||||||||||
Sbjct  297  GGCGGAAGAAGGTGGGCGACAGAGTGGCGAGTCCGTGTCGAGCGCAGCCCTGGGGACTCCCGAGCGGCGCAAGG  370

Query  371  GCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAA  444
            ||||.|||||.|||||.||.||||||.|||||||||||||.|||||||||||.|||||.||.|||||.|||||.
Sbjct  371  GCAGCTTAGCGGATGTGGTGGACACCCTGAAGCAGAGGAAGATGGAAGAGCTGATCAAGAATGAGCCAGAAGAC  444

Query  445  ACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGG  518
            ||.||||||||||||||.||||||||.||||||||||||||||||||.||.|||||||||||.|||||||||||
Sbjct  445  ACTCCCAGTATTGAAAAGCTACTCTCCAAGGACTGGAAAGACAAGCTCCTGGCAATGGGATCAGGGAACTTTGG  518

Query  519  CGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCA  592
            .|||||||||||||||||.||||||.|.||||||||.||..||||.|||||||||||||||||.||||||||||
Sbjct  519  AGAAATAAAAGGGACTCCTGAGAGCCTCGCTGAGAAGGAGCGGCAGCTCATGGGTATGATCAATCAGCTGACCA  592

Query  593  GCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGT  666
            |.||.||.|||||.||..|||||||||||||||||||||||||..|.|||||.||||||||.||||||||||||
Sbjct  593  GTCTACGGGAGCAACTCCTGGCTGCCCACGATGAGCAGAAGAAGTTGGCTGCATCTCAGATAGAGAAACAGCGT  666

Query  667  CAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACA  740
            |||||.|||||||||||||||||||||||.||.||.||.||.||.||.||||||||||||||.|||||||||||
Sbjct  667  CAGCAGATGGAGCTGGCCAAGCAGCAACAGGAGCAGATCGCGAGGCAACAGCAGCAGCTTCTGCAGCAACAACA  740

Query  741  CAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTC  814
            |||||||||.|||||.||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct  741  CAAAATCAACTTGCTTCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTGATGATTCCCGTGTTCCCTC  814

Query  815  CTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGA  888
            ||||.||.|||||.||.||.||||||||||||||||||||||||||.|||||.||.||||||||.||||||||.
Sbjct  815  CTGACCAGCGGACCCTCGCAGCAGCTGCCCAGCAAGGATTCCTCCTTCCTCCTGGTTTCAGCTACAAGGCTGGG  888

Query  889  TGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGG  962
            ||.||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||||||||
Sbjct  889  TGCAGTGACCCTTACCCTGTTCAGCTGATCCCAACCACTATGGCAGCTGCTGCTGCAGCAACACCAGGCTTAGG  962

Query  963  CCCACTCCAACTGCAGCAGTTATATGCTGCCCAGCTAGCTG---CAATGCAGGTATCTCCAGGA--------GG  1025
            |||||||||.||||||.| |.|..||  |||||||.| |||   |.|| |||.||...|||.||        ||
Sbjct  963  CCCACTCCAGCTGCAGGA-TGAAGTG--GCCCAGCCA-CTGAACCTAT-CAGCTAAGCCCAAGACCTCTGATGG  1031

Query 1026  GAA-------GC--------------------TGCCAG------GCATA-----------------CCCCAA--  1047
            .||       ||                    ||||||      |.|||                 ||.|||  
Sbjct 1032  CAAATCACCTGCATCACCCACCTCTCCTCACATGCCAGCTCTGAGAATAAACAGTGGGGCTGGCCCCCTCAAAG  1105

Query 1048  ----------GGCAACCT----TGGTGCTGCTG--------------------TAT----------------CT  1071
                      ||||.|.|    |.||.||.|||                    |||                ||
Sbjct 1106  CCTCTGTCCCGGCAGCATTAGCTAGTCCTTCTGCAAGAGTTAGCACAATAGGCTATTTAAATGACCACGATGCT  1179

Query 1072  CCTACCA--GCATTC--------------------------ACACAGACAAGAGCA-CA---------------  1101
            ...||||  |||.||                          ||.|||.|.|||||| ||               
Sbjct 1180  GTCACCAAGGCAATCCAAGAAGCTCGCCAGATGAAAGAGCAACTCAGGCGAGAGCAGCAAGCGTTGGACGGGAA  1253

Query 1102  -------------AACAG-------CCCACCACC-------CAAAAGCAAGGAAAAAACAACACTGGAGAGTCT  1148
                         |||||       |.||.||.|       ||.||  |||||||||||||||||||||||.||
Sbjct 1254  GGTGGCCGTGGTGAACAGCATAGGTCTCAGCAACTGCCGGACAGAA--AAGGAAAAAACAACACTGGAGAGCCT  1325

Query 1149  GACTCAGCAACTGGCAGTTAAACAGAATGAAGAAGGAAAATTTAGCCATGCAATGATGGATTTCAATCTGAGTG  1222
            |||||||||..|||||||||||||||||||||||||.|||||||||||||.||||||||||||||||.||||||
Sbjct 1326  GACTCAGCAGTTGGCAGTTAAACAGAATGAAGAAGGGAAATTTAGCCATGGAATGATGGATTTCAATATGAGTG  1399

Query 1223  GAGATTCTGATGGAAGTGCTGGAGTCTCAGAGTCAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATGAA  1296
            ||||||||||.|||||.||||||||||||||||||||||||||.|||||||||.|.||.|||||||||||.||.
Sbjct 1400  GAGATTCTGACGGAAGCGCTGGAGTCTCAGAGTCAAGAATTTACAGGGAATCCAGGGGACGTGGTAGCAACGAG  1473

Query 1297  CCCCACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTT  1370
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||||||||.|||||
Sbjct 1474  CCCCACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCGAAAGATGAACGGAGGAAAATCCTTCAGGCCTT  1547

Query 1371  TCCTGACATGCACAACTCCAACATCAGCAAGATATTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAAC  1444
            |||.|||||||||||.||||||||||||||||||.|||||||||||||||||||||||||.|||||||||||||
Sbjct 1548  TCCCGACATGCACAATTCCAACATCAGCAAGATACTGGGATCTCGCTGGAAAGCTATGACCAACCTAGAGAAAC  1621

Query 1445  AGCCATATTATGAGGAGCAAGCCCGTCTCAGCAAGCAGCACCTGGAGAAGTACCCTGACTATAAGTACAAGCCC  1518
            |||||||.|||||||||||.|||||.||||||||.||||||||||||||||||||.|||||.|||||||||||.
Sbjct 1622  AGCCATACTATGAGGAGCAGGCCCGCCTCAGCAAACAGCACCTGGAGAAGTACCCGGACTACAAGTACAAGCCT  1695

Query 1519  AGGCCAAAGCGCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTGGTGAATACAAGGCAATCATGCGCAACAG  1592
            |||||||||||||||||.||||||||.|||||.||.|||||.||.||.||.||||||||.||||||||.|||.|
Sbjct 1696  AGGCCAAAGCGCACCTGTCTGGTGGACGGCAAGAAACTGCGTATCGGGGAGTACAAGGCCATCATGCGGAACCG  1769

Query 1593  GCGGCAGGAAATGCGGCAGTACTTCAATGTTGGGCAACAAGCACAGATCCCCATTGCCACTGCTGGTGTTGTGT  1666
            |.|||||||||||||.|||||||||||.||||||||||||||||||||||||||.||.||.||.||.|||||.|
Sbjct 1770  GAGGCAGGAAATGCGACAGTACTTCAACGTTGGGCAACAAGCACAGATCCCCATCGCGACGGCCGGAGTTGTAT  1843

Query 1667  ACCCTGGAGCCATCGCCATGGCTGGGATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGC  1740
            ||||..|.||||||||||||||.||.|||||.|||||||||||||||||.||||||||.||||||||.||||||
Sbjct 1844  ACCCCAGCGCCATCGCCATGGCAGGAATGCCGTCCCCTCACCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGC  1917

Query 1741  CCAGAGCCTGGGATGCCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGAT  1814
            ||.|||||.||||||||.||.|||||||||||||||||.|..||.|||||||||||.||.|||||.||||||||
Sbjct 1918  CCGGAGCCCGGGATGCCCGTGATCCAGAGCACTTACGGCGCCAAGGGAGAGGAGCCCCACATCAAGGAAGAGAT  1991

Query 1815  ACAGGCCGAGGACATCAATGGAGAAATTTATGATGAGTACGACGAGGAAGAGGATGATCCAGATGTAGATTATG  1888
            .|||||.|||||||||||.|||||.|||||.||.||||||||.|||||.|||||.||.||.|||||.|||||||
Sbjct 1992  CCAGGCTGAGGACATCAACGGAGAGATTTACGAGGAGTACGATGAGGAGGAGGAGGACCCGGATGTGGATTATG  2065

Query 1889  GGAGTGACAGTGAAAACCATATTGCAGGACAAGCCAAC  1926
            ||||||||||.||||||||.|||||.||||||||||||
Sbjct 2066  GGAGTGACAGCGAAAACCACATTGCGGGACAAGCCAAC  2103

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