Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11149
Subject:
XM_017321476.1
Aligned Length:
2110
Identities:
1617
Gaps:
296

Alignment

Query    1  ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAA  74
            |||||||||||||||||||||||||||||||||||..|||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAGACAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAA  74

Query   75  AGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTC  148
            |||||||||.|||||||||||..|||||||||||||||||||||||||.|||                      
Sbjct   75  AGTGGAAGAGGAGGAGAGTGAGAGGCTCCCAGCCTTTCACCTTCCCTTACAT----------------------  126

Query  149  ACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCAC  222
                                                                                      
Sbjct  127  --------------------------------------------------------------------------  126

Query  223  AATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAA  296
                     |||||.||||||||||||||||||||||||||.||.|||.|||||||||||||||||||||||||
Sbjct  127  ---------GAAGTCGATGGCAATAAAGTTATGTCTTCATTAGCTCCATACAACTCATCTACCTCACCTCAGAA  191

Query  297  GGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGG  370
            |||.||||||||||||||||||||||||||||||.||||.||..||||||||||.|||||.||.||||||||||
Sbjct  192  GGCGGAAGAAGGTGGGCGACAGAGTGGCGAGTCCGTGTCGAGCGCAGCCCTGGGGACTCCCGAGCGGCGCAAGG  265

Query  371  GCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAA  444
            ||||.|||||.|||||.||.||||||.|||||||||||||.|||||||||||.|||||.||.|||||.|||||.
Sbjct  266  GCAGCTTAGCGGATGTGGTGGACACCCTGAAGCAGAGGAAGATGGAAGAGCTGATCAAGAATGAGCCAGAAGAC  339

Query  445  ACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGG  518
            ||.||||||||||||||.||||||||.||||||||||||||||||||.||.|||||||||||.|||||||||||
Sbjct  340  ACTCCCAGTATTGAAAAGCTACTCTCCAAGGACTGGAAAGACAAGCTCCTGGCAATGGGATCAGGGAACTTTGG  413

Query  519  CGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCA  592
            .|||||||||||||||||.||||||.|.||||||||.||..||||.|||||||||||||||||.||||||||||
Sbjct  414  AGAAATAAAAGGGACTCCTGAGAGCCTCGCTGAGAAGGAGCGGCAGCTCATGGGTATGATCAATCAGCTGACCA  487

Query  593  GCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGT  666
            |.||.||.|||||.||..|||||||||||||||||||||||||..|.|||||.||||||||.||||||||||||
Sbjct  488  GTCTACGGGAGCAACTCCTGGCTGCCCACGATGAGCAGAAGAAGTTGGCTGCATCTCAGATAGAGAAACAGCGT  561

Query  667  CAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACA  740
            |||||.|||||||||||||||||||||||.||.||.||.||.||.||.||||||||||||||.|||||||||||
Sbjct  562  CAGCAGATGGAGCTGGCCAAGCAGCAACAGGAGCAGATCGCGAGGCAACAGCAGCAGCTTCTGCAGCAACAACA  635

Query  741  CAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTC  814
            |||||||||.|||||.||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct  636  CAAAATCAACTTGCTTCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTGATGATTCCCGTGTTCCCTC  709

Query  815  CTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGA  888
            ||||.||.|||||.||.||.||||||||||||||||||||||||||.|||||.||.||||||||.||||||||.
Sbjct  710  CTGACCAGCGGACCCTCGCAGCAGCTGCCCAGCAAGGATTCCTCCTTCCTCCTGGTTTCAGCTACAAGGCTGGG  783

Query  889  TGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGG  962
            ||.||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||||||||
Sbjct  784  TGCAGTGACCCTTACCCTGTTCAGCTGATCCCAACCACTATGGCAGCTGCTGCTGCAGCAACACCAGGCTTAGG  857

Query  963  CCCACTCCAACTGCAGCAGTTATATGCTGCCCAGCTAGCTG---CAATGCAGGTATCTCCAGGA--------GG  1025
            |||||||||.||||||.| |.|..||  |||||||.| |||   |.|| |||.||...|||.||        ||
Sbjct  858  CCCACTCCAGCTGCAGGA-TGAAGTG--GCCCAGCCA-CTGAACCTAT-CAGCTAAGCCCAAGACCTCTGATGG  926

Query 1026  GAA-------GC--------------------TGCCAG------GCATA-----------------CCCCAA--  1047
            .||       ||                    ||||||      |.|||                 ||.|||  
Sbjct  927  CAAATCACCTGCATCACCCACCTCTCCTCACATGCCAGCTCTGAGAATAAACAGTGGGGCTGGCCCCCTCAAAG  1000

Query 1048  ----------GGCAACCT----TGGTGCTGCTG--------------------TAT----------------CT  1071
                      ||||.|.|    |.||.||.|||                    |||                ||
Sbjct 1001  CCTCTGTCCCGGCAGCATTAGCTAGTCCTTCTGCAAGAGTTAGCACAATAGGCTATTTAAATGACCACGATGCT  1074

Query 1072  CCTACCA--GCATTC--------------------------ACACAGACAAGAGCA-CA---------------  1101
            ...||||  |||.||                          ||.|||.|.|||||| ||               
Sbjct 1075  GTCACCAAGGCAATCCAAGAAGCTCGCCAGATGAAAGAGCAACTCAGGCGAGAGCAGCAAGCGTTGGACGGGAA  1148

Query 1102  -------------AACAG-------CCCACCACC-------CAAAAGCAAGGAAAAAACAACACTGGAGAGTCT  1148
                         |||||       |.||.||.|       ||.||  |||||||||||||||||||||||.||
Sbjct 1149  GGTGGCCGTGGTGAACAGCATAGGTCTCAGCAACTGCCGGACAGAA--AAGGAAAAAACAACACTGGAGAGCCT  1220

Query 1149  GACTCAGCAACTGGCAGTTAAACAGAATGAAGAAGGAAAATTTAGCCATGCAATGATGGATTTCAATCTGAGTG  1222
            |||||||||..|||||||||||||||||||||||||.|||||||||||||.||||||||||||||||.||||||
Sbjct 1221  GACTCAGCAGTTGGCAGTTAAACAGAATGAAGAAGGGAAATTTAGCCATGGAATGATGGATTTCAATATGAGTG  1294

Query 1223  GAGATTCTGATGGAAGTGCTGGAGTCTCAGAGTCAAGAATTTATAGGGAATCCCGAGGGCGTGGTAGCAATGAA  1296
            ||||||||||.|||||.||||||||||||||||||||||||||.|||||||||.|.||.|||||||||||.||.
Sbjct 1295  GAGATTCTGACGGAAGCGCTGGAGTCTCAGAGTCAAGAATTTACAGGGAATCCAGGGGACGTGGTAGCAACGAG  1368

Query 1297  CCCCACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCTAAAGATGAACGGAGAAAGATCCTTCAAGCCTT  1370
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||||||||.|||||
Sbjct 1369  CCCCACATAAAGCGTCCAATGAATGCCTTCATGGTGTGGGCGAAAGATGAACGGAGGAAAATCCTTCAGGCCTT  1442

Query 1371  TCCTGACATGCACAACTCCAACATCAGCAAGATATTGGGATCTCGCTGGAAAGCTATGACAAACCTAGAGAAAC  1444
            |||.|||||||||||.||||||||||||||||||.|||||||||||||||||||||||||.|||||||||||||
Sbjct 1443  TCCCGACATGCACAATTCCAACATCAGCAAGATACTGGGATCTCGCTGGAAAGCTATGACCAACCTAGAGAAAC  1516

Query 1445  AGCCATATTATGAGGAGCAAGCCCGTCTCAGCAAGCAGCACCTGGAGAAGTACCCTGACTATAAGTACAAGCCC  1518
            |||||||.|||||||||||.|||||.||||||||.||||||||||||||||||||.|||||.|||||||||||.
Sbjct 1517  AGCCATACTATGAGGAGCAGGCCCGCCTCAGCAAACAGCACCTGGAGAAGTACCCGGACTACAAGTACAAGCCT  1590

Query 1519  AGGCCAAAGCGCACCTGCCTGGTGGATGGCAAAAAGCTGCGCATTGGTGAATACAAGGCAATCATGCGCAACAG  1592
            |||||||||||||||||.||||||||.|||||.||.|||||.||.||.||.||||||||.||||||||.|||.|
Sbjct 1591  AGGCCAAAGCGCACCTGTCTGGTGGACGGCAAGAAACTGCGTATCGGGGAGTACAAGGCCATCATGCGGAACCG  1664

Query 1593  GCGGCAGGAAATGCGGCAGTACTTCAATGTTGGGCAACAAGCACAGATCCCCATTGCCACTGCTGGTGTTGTGT  1666
            |.|||||||||||||.|||||||||||.||||||||||||||||||||||||||.||.||.||.||.|||||.|
Sbjct 1665  GAGGCAGGAAATGCGACAGTACTTCAACGTTGGGCAACAAGCACAGATCCCCATCGCGACGGCCGGAGTTGTAT  1738

Query 1667  ACCCTGGAGCCATCGCCATGGCTGGGATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCTAGCAGC  1740
            ||||..|.||||||||||||||.||.|||||.|||||||||||||||||.||||||||.||||||||.||||||
Sbjct 1739  ACCCCAGCGCCATCGCCATGGCAGGAATGCCGTCCCCTCACCTGCCCTCCGAGCACTCGAGCGTGTCCAGCAGC  1812

Query 1741  CCAGAGCCTGGGATGCCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCCACATATCAAAGAAGAGAT  1814
            ||.|||||.||||||||.||.|||||||||||||||||.|..||.|||||||||||.||.|||||.||||||||
Sbjct 1813  CCGGAGCCCGGGATGCCCGTGATCCAGAGCACTTACGGCGCCAAGGGAGAGGAGCCCCACATCAAGGAAGAGAT  1886

Query 1815  ACAGGCCGAGGACATCAATGGAGAAATTTATGATGAGTACGACGAGGAAGAGGATGATCCAGATGTAGATTATG  1888
            .|||||.|||||||||||.|||||.|||||.||.||||||||.|||||.|||||.||.||.|||||.|||||||
Sbjct 1887  CCAGGCTGAGGACATCAACGGAGAGATTTACGAGGAGTACGATGAGGAGGAGGAGGACCCGGATGTGGATTATG  1960

Query 1889  GGAGTGACAGTGAAAACCATATTGCAGGACAAGCCAAC  1926
            ||||||||||.||||||||.|||||.||||||||||||
Sbjct 1961  GGAGTGACAGCGAAAACCACATTGCGGGACAAGCCAAC  1998

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