Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11249
Subject:
XM_011241076.2
Aligned Length:
1710
Identities:
1076
Gaps:
540

Alignment

Query    1  ATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CGTGTGGTTCTTCATCGTGCTATTCCTGGTCTACATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CAGTGAGCATGTTTTTGAACACATTAACACCGAAGTTCTACGTGGCCCTAACAGGCACTTCCTCACTAATATCA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GGGCTTATTTTGATATTTGAATGGTGGTATTTTCGCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCACTTGCGCCCCCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAACTCAGATTCCAATAGGCAAAGTGTCT  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CAGAATGCAAAGTATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTATACTTGGGTGACA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GGACGAGAGCCTCTTACTTACTATGACATGAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTC  518
                                       |||||.|||||||||||.||||||||||||||||||||||||||.||
Sbjct    1  ---------------------------ATGAACCTCTCTGCCCAGGACCACCAGACATTCTTTACTTGTGATTC  47

Query  519  GGACCATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTG  592
            .||.|||||.||.||.|||||||||||||||||.|||||.||||||||.||.|||||.|||||.||||||||||
Sbjct   48  AGATCATCTTCGCCCTGCAGATGCAATAATGCAAAAAGCTTGGAGAGAAAGGAACCCTCAAGCCAGGATTTCTG  121

Query  593  CAGCTCATGAAGCCTTGGAGATAAATG-----------------------------------------------  619
            |||||||||||||||||||||||||.|                                               
Sbjct  122  CAGCTCATGAAGCCTTGGAGATAAACGAAATTAGGTCCAGAGTTGAAGTTCCCCTAATTGCTTCCTCTACCATC  195

Query  620  ----------------------AGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAACCATTGC  671
                                  |||||||||||||.||.|||||||||||.|||||.|||||.|||||.|||||
Sbjct  196  TGGGAGATAAAATTGTTACCAAAGTGTGCAACTGCGTACATTCTCTTGGCGGAAGAAGAAGCGACAACTATTGC  269

Query  672  TGAAGCAGAAAAATTATTTAAGCAGGCCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAAC  745
            |||||||||||||.|.|||||||||||||||||||||||||||||.||||||||.|||||||||||||||||||
Sbjct  270  TGAAGCAGAAAAACTCTTTAAGCAGGCCCTGAAGGCTGGAGATGGTTGTTACCGGCGCTCTCAGCAGCTACAAC  343

Query  746  ATCATGGATCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCA  819
            |||||||.||||||||||||||.|||||.||||||||||||||||||||.||.||.||||||||||||||.||.
Sbjct  344  ATCATGGGTCCCAGTATGAAGCTCAACACAGACGAGACACCAATGTCTTAGTCTATATCAAAAGAAGGCTGGCG  417

Query  820  ATGTGTGCCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGAGATTTAATGAAGGAGTTCCCCCT  893
            |||||||||.|.|||||.||.||||||||.|||||||||||.||||||||||||||||||||||||||.|||||
Sbjct  418  ATGTGTGCCCGGAGACTTGGAAGGACCAGAGAAGCAGTGAAGATGATGAGAGATTTAATGAAGGAGTTTCCCCT  491

Query  894  TCTGAGTATGTTCAATATCCATGAAAACCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGG  967
            .||.||.|||||||||||||||||.||||||.|||||||.|||||||||||.|||||.||||||||||||||||
Sbjct  492  CCTAAGCATGTTCAATATCCATGAGAACCTTCTAGAAGCTCTTCTGGAACTCCAAGCTTATGCTGATGTTCAGG  565

Query  968  CAGTCTTAGCAAAGTATGATGATATAAGCTTACCAAAGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAA  1041
            ||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||.||..||||||||
Sbjct  566  CAGTCTTAGCAAAGTATGATGATATAAGCTTACCAAAGTCGGCGACAATATGCTACACAGCCGCCCTGCTCAAA  639

Query 1042  GCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGC  1115
            |||||||||||||||||||||||||||||.||||||||.||||||.||||||||||||||||||||||||||||
Sbjct  640  GCAAGAGCTGTCTCTGACAAATTCTCTCCAGAGGCTGCGTCTCGGAGGGGGCTGAGCACAGCAGAGATGAATGC  713

Query 1116  AGTAGAGGCCATTCATAGAGCTGTGGAATTCAATCCTCATGTGCCAAAATACCTACTAGAAATGAAAAGCTTAA  1189
            ||||||.|||||.||.||||||||||||||.|||||.||.|||||||||||.||||||||||||||||||||||
Sbjct  714  AGTAGAAGCCATCCACAGAGCTGTGGAATTTAATCCACACGTGCCAAAATATCTACTAGAAATGAAAAGCTTAA  787

Query 1190  TCCTACCCCCAGAACATATCCTGAAGAGAGGAGACAGTGAAGCAATAGCATATGCATTCTTTCATCTTGCACAC  1263
            ||||.||.||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct  788  TCCTCCCACCAGAACACATCCTGAAGAGAGGAGACAGTGAAGCGATAGCATATGCATTCTTTCATCTTGCACAC  861

Query 1264  TGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTTCGGATGATCCCTTATCC  1337
            ||||||||.||||||||||||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||
Sbjct  862  TGGAAGAGGGTGGAAGGGGCTTTGAATCTCTTGCATTGTACGTGGGAAGGCACTTTCCGGATGATCCCGTATCC  935

Query 1338  CTTGGAAAAGGGGCACCTATTTTATCCTTACCCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTTCCATCTT  1411
            |.||||.|||||.||||||||||||||.|||||||||||||||||||||||.|||||.|||||||||||.||||
Sbjct  936  CCTGGAGAAGGGACACCTATTTTATCCATACCCAATCTGTACAGAAACAGCTGACCGGGAGCTGCTTCCCTCTT  1009

Query 1412  TCCATGAAGTCTCAGTTTACCCAAAGAAGGAGCTTCCCTTCTTTATTCTCTTTACTGCTGGATTATGTTCCTTC  1485
            |||||||||||||||||||||||||||||||.|||||||||||.||.|||||.|||||||||.|.||.||||||
Sbjct 1010  TCCATGAAGTCTCAGTTTACCCAAAGAAGGAACTTCCCTTCTTCATCCTCTTCACTGCTGGACTGTGCTCCTTC  1083

Query 1486  ACAGCCATGCTGGCCCTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGCAC  1559
            ||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||
Sbjct 1084  ACAGCCATGCTGGCCCTCCTGACACATCAGTTTCCGGAACTTATGGGAGTCTTCGCAAAAGCTTTCCTCAGCAC  1157

Query 1560  TTTGTTTGCCCCCTTAAACTTTGTCATGGAGAAAGTGGAGAGCATCCTCCCATCCAGTCTGTGGCACCAGCTAA  1633
            |||||||||||||||.||||||||.||||||||||||||.|||||||||||.||||||.|||||||.|||||.|
Sbjct 1158  TTTGTTTGCCCCCTTGAACTTTGTTATGGAGAAAGTGGAAAGCATCCTCCCCTCCAGTTTGTGGCATCAGCTGA  1231

Query 1634  CACGGATC  1641
            ||||||||
Sbjct 1232  CACGGATC  1239

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