Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11391
• Subject: XM_024452178.1
• Aligned Length: 1342
• Identities: 654
• Gaps: 605

Alignment

Query    1  ATGAATCCACAGATCAGAAATCCGATGGAGCGGATGTATCGAGACACATTCTACGACAACTTTGAAAACGAACC  74
            |||||.||.||..|||||||..|..|||||||.|||||||||||||||||||.|.||||||||.|.||...|||
Sbjct    1  ATGAAGCCTCACTTCAGAAACACAGTGGAGCGAATGTATCGAGACACATTCTCCTACAACTTTTATAATAGACC  74

Query   75  CATCCTCTATGGTCGGAGCTACACT-TGGCTGTGCTATGAAGTGAAAATAAAGAGGGGCCGCTCAAATCTCCTT  147
            ||||||.|.|.|||||| .|||..| |||||||||||.||||||||||.|||   |||.|.|||||..|.||.|
Sbjct   75  CATCCTTTCTCGTCGGA-ATACCGTCTGGCTGTGCTACGAAGTGAAAACAAA---GGGTCCCTCAAGGCCCCGT  144

Query  148  TGGGACACAGGGGTCTTTCGAGGCCAGGTGTATTTCGAGCCTCAGTACCACGCAGAAATGTGCTTCCTCTCTTG  221
            |.||||.||..|.|||||||||||||||||||||.|.|||||.||.||||||||||||||||||||||||||||
Sbjct  145  TTGGACGCAAAGATCTTTCGAGGCCAGGTGTATTCCCAGCCTGAGCACCACGCAGAAATGTGCTTCCTCTCTTG  218

Query  222  GTTCTGTGGCAACCAGCTGCCTGCTTACAAGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGG  295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  219  GTTCTGTGGCAACCAGCTGCCTGCTTACAAGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGG  292

Query  296  ACTGTGTGGCGAAGCTGGCCGAATTCCTGTCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTC  369
            |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  293  ACTGTGTGGCGAAGCTGGCCGAATTCCTGGCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTC  366

Query  370  TACTACTACTGGGAAAGAGATTACCGAAGGGCGCTCTGCAGGCTGAGTCAGGCAGGAGCCCGCGTGAAGATCAT  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||
Sbjct  367  TACTACTACTGGGAAAGAGATTACCGAAGGGCGCTCTGCAGGCTGAGTCAGGCAGGGGCCCGCGTGAAGATTAT  440

Query  444  GGACTATGA-----------------------------------------------------------------  452
            ||||.||||                                                                 
Sbjct  441  GGACGATGAAGGTGAGAGGTGGAGGGGTCAGGGGAGCGTGAGCGGGAGGAACAGCATGAAAGATGGATGGATCT  514

Query  453  --------------------------------------------------------------------------  452
                                                                                      
Sbjct  515  GCAATGCCATGGCTGGGGGTGTCCCAGGGCAGCCTGCAGGGGCGGGGCCAGCACTGACAGCAACTGACAGCCAG  588

Query  453  --------------------------------------------------------------------AGAATT  458
                                                                                ||||||
Sbjct  589  GAGACCAGGCCTGGGAGCGCGGGCCCAGGGTCAGGGCAGAGCCTGACTGCTTCCTGCCTCTTCGTCTCAGAATT  662

Query  459  TGCATACTGCTGGGAAAACTTTGTGTACAATGAAGGTCAGCAATTCATGCCTTGGTACAAATTCGATGAAAATT  532
            |||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||.||||
Sbjct  663  TGCATACTGCTGGGAAAACTTTGTGTACAGTGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATT  736

Query  533  ATGCATTCCTGCACCGCACGCTAAAGGAGATTCTC-------------AGGCTAAGAATC--------TTCT-C  584
            |||||||||||||||||||||||||||||||||||             ||||.|.|.|||        |||| |
Sbjct  737  ATGCATTCCTGCACCGCACGCTAAAGGAGATTCTCAGAAACCCGATGGAGGCAATGTATCCACACATATTCTAC  810

Query  585  TGTGGCTTT-------TACG----GCCGCCATG--CGGA----------GCTGCGCTTC----------TTG--  623
            |....||||       ||||    ||  |.|||  ||||          ||||.|||||          |||  
Sbjct  811  TTCCACTTTAAAAACCTACGCAAAGC--CTATGGTCGGAACGAAAGCTGGCTGTGCTTCACCATGGAAGTTGTA  882

Query  624  ----------GACCTGGTTCCT------------TCTT-----TGCAGTTGGACCC---GGCCCA---------  658
                      .|||||..||||            ||||     ..|||.||||.||   |.||||         
Sbjct  883  AAGCACCACTCACCTGTCTCCTGGAAGAGGGGCGTCTTCCGAAACCAGGTGGATCCTGAGACCCATTGTCATGC  956

Query  659  ---------------------------------------------------GATCTACAGGGTCACTTGGTTCA  681
                                                               .|.||||..||||||.||||.||
Sbjct  957  AGAAAGGTGCTTCCTCTCTTGGTTCTGTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACA  1030

Query  682  TCTCCTGGAGCCCCTGCTTCTCCTGGGGCTGTGCCGGGGAAGTGCGTGCGTTCCT--TCAGGAGAACACA--CA  751
            ..||.||||||||.|||    ||.|.|  |||||.|||||.|||...|.||||||  .||||    ||||  .|
Sbjct 1031  CATCTTGGAGCCCTTGC----CCAGAG--TGTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGG----CACAGCAA  1094

Query  752  CG------------------------------------------------------------------------  753
            ||                                                                        
Sbjct 1095  CGTGAATCTCACCATCTTCACCGCCCGCCTCTACTACTTCTGGGATACAGATTACCAGGAGGGGCTCCGCAGCC  1168

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1169  TGAGTCAGGAAGGGGCCTCCGTGGAGATCATGGGCTACAAAGATTTTAAATATTGTTGGGAAAACTTTGTGTAC  1242

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 1243  AATGATGATGAGCCATTCAAGCCTTGGAAAGGACTAAAATACAACTTTCTATTCCTGGACAGCAAGCTGCAGGA  1316

Query  754  ----------  753
                      
Sbjct 1317  GATTCTCGAG  1326