Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11431
Subject:
XM_006496877.2
Aligned Length:
3069
Identities:
1578
Gaps:
1281

Alignment

Query    1  ATGGAGGTCAGAGCTTCATTACAGAAGATAGTTTCTAATGGTGATGAACAATTGGAAAAAGCCATGGAAGAGAT  74
            |||||||||||||||||.||.||||||||||.|||.|||||||||||.||.|||||||||||||||||||||||
Sbjct    1  ATGGAGGTCAGAGCTTCGTTCCAGAAGATAGCTTCCAATGGTGATGAGCAGTTGGAAAAAGCCATGGAAGAGAT  74

Query   75  TTTGAGAGATTCCGAGAAAAGGCCAAGCAGTCTTCTTGTTGATTGTCAGAGTTCCAGTGAGATTTCAGACCATT  148
            |||||||||||||||||||.|.|.||||.||||.|.|||||||||.||..|.||||||||||||||||||..|.
Sbjct   75  TTTGAGAGATTCCGAGAAAGGACAAAGCGGTCTACCTGTTGATTGCCAAGGATCCAGTGAGATTTCAGACTGTC  148

Query  149  CGTTTGGAGATATTCCAGCCAGCCAAACAAATAAGCCATCTCTTCAGTTAATTTTGGATCCGTCTAACACAGAA  222
            |.|||||||||.|.||.|||||||||||||.||||||..||||.|||||||||||||||||.|||||.||||||
Sbjct  149  CCTTTGGAGATGTGCCGGCCAGCCAAACAACTAAGCCGCCTCTCCAGTTAATTTTGGATCCATCTAATACAGAA  222

Query  223  ATTTCTACACCCAGACCATCTTCTCCAGGTGGACTACCTGAAGAAGATAGTGTTTTATTTAATAAACTGACCTA  296
            |||||.|||||||||||||||||||||.|..||.|.|||||||||||.||||||.|.|||||.||.|||||.||
Sbjct  223  ATTTCCACACCCAGACCATCTTCTCCAAGCAGATTTCCTGAAGAAGACAGTGTTCTCTTTAACAAGCTGACATA  296

Query  297  CTTAGGATGTATGAAGGTTTCTTCCCCACGTAATGAAGTAGAGGCTTTACGGGCAATGGCAACCATGAAATCTT  370
            ||||||||||||||||||||||||||||||.|.||||||.||||||||||||||.|||||.|||||||.|.|||
Sbjct  297  CTTAGGATGTATGAAGGTTTCTTCCCCACGCAGTGAAGTGGAGGCTTTACGGGCCATGGCCACCATGAGAGCTT  370

Query  371  CCAGTCAATACCCCTTTCCTGTTACCCTGTATGTACCAAATGTTCCAGAAGGTTCTGTGAGAATTATAGACCAA  444
            |||||||.|||||||||.|||||||.||||||||.||.||||||||||||||.|||||||||||.||||||||.
Sbjct  371  CCAGTCAGTACCCCTTTGCTGTTACTCTGTATGTGCCCAATGTTCCAGAAGGATCTGTGAGAATCATAGACCAG  444

Query  445  TCCAGCAATGTGGAGATAGCATCTTTTCCAATCTATAAGGTGTTATTCTGTGCACGTGGACATGACGGAACAAC  518
            ||.|||||||||||||||||||||||||||||.|||||.|||.|.||||||||||||||.|||||.||.|||.|
Sbjct  445  TCAAGCAATGTGGAGATAGCATCTTTTCCAATTTATAAAGTGCTTTTCTGTGCACGTGGGCATGATGGGACAGC  518

Query  519  AGAGAGCAATTGCTTTGCATTTACAGAGAGTTCCCATGGTTCGGAAGAATTTCAGATACATGTTTTCTCCTGTG  592
            .||||||||||||||||||||||||||||||||.|||||.||.|||||||||||||||||||||||||||||||
Sbjct  519  CGAGAGCAATTGCTTTGCATTTACAGAGAGTTCTCATGGCTCAGAAGAATTTCAGATACATGTTTTCTCCTGTG  592

Query  593  AAATTAAAGAGGCAGTAAGCAGAATTTTGTACAGTTTCTGTACAGCATTCAAACGTTCTTCCAGACAAGTGTCT  666
            ||||||||||||||||||||||||||||.||.||||||||.||.||||||||||||||||||||||||||||||
Sbjct  593  AAATTAAAGAGGCAGTAAGCAGAATTTTATATAGTTTCTGCACTGCATTCAAACGTTCTTCCAGACAAGTGTCT  666

Query  667  GATGTTAAAGACTCAGTTATTCCTACCCCCGACAGTGATGTGTTTACCTTCAGTGTCTCCTTGGAGGTAAAAGA  740
            |||||||||||||||||.||.||.||.|||||||||||||||||||||||||||||.|||||||||||.|||||
Sbjct  667  GATGTTAAAGACTCAGTCATCCCGACTCCCGACAGTGATGTGTTTACCTTCAGTGTTTCCTTGGAGGTCAAAGA  740

Query  741  AGACGATGGAAAAGGAAACTTTAGCCCTGTGCCTAAGGATAGAGATAAATTTTATTTCAAATTAAAGCAAGGAA  814
            |||.||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  741  AGATGATGGAAAAGGAAACTTTAGTCCCGTGCCTAAGGATAGAGATAAATTTTATTTCAAAATAAAGCAAGGAA  814

Query  815  TAGAGAAGAAGGTTGTGATTACAGTGCAGCAACTTTCTAACAAAGAATTAGCTATTGAAAGATGTTTTGGAATG  888
            |||||||||||||||||||||||||.||||||||.|||||||||||||||||||||||.|||||||||||||||
Sbjct  815  TAGAGAAGAAGGTTGTGATTACAGTTCAGCAACTGTCTAACAAAGAATTAGCTATTGAGAGATGTTTTGGAATG  888

Query  889  TTATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACATGCATTTACTGGATATGGAATCCATGGGAAAGAGCTA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct  889  TTATTAAGCCCAGGTCGAAACGTGAAGAACAGTGACATGCATTTACTGGATATGGAGTCCATGGGAAAGAGCTA  962

Query  963  TGATGGGAGAGCTTATGTCATCACTGGCATGTGGAACCCCAATGCACCAGTATTTCTGGCACTTAACGAGGAAA  1036
            |||||||||||||||.||||||||.|||||||||||||||||.||||||.||||||||||.|||||.||.||||
Sbjct  963  TGATGGGAGAGCTTACGTCATCACGGGCATGTGGAACCCCAACGCACCAATATTTCTGGCTCTTAATGAAGAAA  1036

Query 1037  CCCCAAAAGATAAGCAAGTATACATGACTGTGGCAGTGGATATGGTAGTCACAGAGGTGGTGGAGCCTGTTCGC  1110
            |.||.||||||||.|..||.||||||||.||.||||||||.|||||.||||||||||||||||||||.||.||.
Sbjct 1037  CGCCCAAAGATAAACGGGTGTACATGACCGTTGCAGTGGACATGGTGGTCACAGAGGTGGTGGAGCCAGTCCGT  1110

Query 1111  TTTCTCCTGGAGACAGTAGTCCGTGTGTACCCTGCAAATGAGCGATTTTGGTATTTCAGCAGAAAGACTTTCAC  1184
            ||||||||||||||||||||.|||||.|||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 1111  TTTCTCCTGGAGACAGTAGTTCGTGTATACCCTGCAAATGAGAGATTTTGGTATTTCAGCAGAAAGACTTTCAC  1184

Query 1185  AGAGACCTTCTTCATGAGATTGAAACAGTCTGAGGGAAAAGGCCATACCAATGCTGGAGATGCAATATATGAGG  1258
            ||||||.|||||||||||.||||||||||||||||||||||||||.|.||.|||||||||||||||||||||.|
Sbjct 1185  AGAGACTTTCTTCATGAGGTTGAAACAGTCTGAGGGAAAAGGCCACAGCAGTGCTGGAGATGCAATATATGAAG  1258

Query 1259  TGGTGAGTCTACAGCGAGAGTCTGACAAGGAGGAACCAGTCACTCCTACTAGTGGAGGGGGTCCAATGTCACCC  1332
            ||||||||||.|||.||||.||||||||||||||.||..||||.||||||||||..|||||.|||||||||||.
Sbjct 1259  TGGTGAGTCTGCAGAGAGAATCTGACAAGGAGGAGCCCATCACCCCTACTAGTGCTGGGGGCCCAATGTCACCA  1332

Query 1333  CAGGATGATGAAGCAGAAGAGGAGAGTGATAATGAACTCTCAAGTGGAACAGGTGATGTGTCTAAGGATTGTCC  1406
            |||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.||.|||||
Sbjct 1333  CAGGAGGATGAAGCAGAAGAGGAGAGTGATAATGAACTCTCGAGTGGAACAGGTGATGTGTCAAAAGACTGTCC  1406

Query 1407  TGAGAAGATCCTGTATTCTTGGGGAGAGTTGCTAGGAAAATGGCACAGTAACCTTGGTGCACGACCGAAAGGGC  1480
            |||||||||.||.||||||||||||||.|||.||||||.||||||||.|||||||||||..|||||.|||||.|
Sbjct 1407  TGAGAAGATTCTCTATTCTTGGGGAGAATTGTTAGGAAGATGGCACAATAACCTTGGTGGCCGACCAAAAGGAC  1480

Query 1481  TGTCTACTCTGGTGAAGAGTGGTGTCCCTGAAGCATTGAGGGCAGAGGTATGGCAGTTATTGGCAGGCTGCCAT  1554
            |.|..||..||||.|||||||||||.|||||.|||.|.||||||||.||||||||..||||.|||||.||||||
Sbjct 1481  TATTCACCTTGGTAAAGAGTGGTGTTCCTGAGGCACTAAGGGCAGAAGTATGGCAACTATTAGCAGGATGCCAT  1554

Query 1555  GACAACCAGGCAATGCTGGATAGATACCGAATTCTTATCACAAAGCA------ACAGATGAAATTTAGTCTTAC  1622
            |||||.||||.|||||||||||.|||||||||.||||||||||||.|      ||||..||...|||   ||||
Sbjct 1555  GACAATCAGGAAATGCTGGATAAATACCGAATCCTTATCACAAAGGACTCTGCACAGGAGAGTGTTA---TTAC  1625

Query 1623  ACCGAGACAGACTATTCACC--------------------TAGTT-AAATA---TGAAGGGTCTATGAAGGTCT  1672
             .|||||     ||||||.|                    ||.|| |||.|   ||.|||     .||.|||  
Sbjct 1626  -TCGAGA-----TATTCATCGTACATTTCCTGCACACGATTACTTCAAAGACACTGGAGG-----CGATGGT--  1686

Query 1673  CCATGACACCCTGTA-ACCAGCTGCAATTTGACATTAGACTTGATGTTC--TGATTACTT---ATACT------  1734
             ||.||..||||.|| |..|.||||||   |.|.|   |||.|.|||||  |||..||.|   .||||      
Sbjct 1687  -CAAGAATCCCTTTACAAAATCTGCAA---GGCCT---ACTCGGTGTTCGATGAAGACATTGGGTACTGTCAAG  1753

Query 1735  -------TTTTGTTTTAGTTCCTTTCCT-------------------GAGCCTGAATTGT-----------ACA  1771
                   ||||.||   |.|.||.|.||                   ||||..|.|||.|           ||.
Sbjct 1754  GACAGTCTTTTCTT---GCTGCTGTACTACTGTTGCATATGCCAGAGGAGCAAGCATTCTGTGTTTTGGTGACT  1824

Query 1772  AATATGT------------------CCTAAAACACCAAC--TTATTAAGAGGCTT-AATGC-----CTGT----  1815
            |.|||||                  .||.|.|||..|||  ||.|.|||| .||| |.|||     ||.|    
Sbjct 1825  ATTATGTATGGTTATAAATTGAGAGACTTATACAGAAACAATTTTGAAGA-TCTTCATTGCAAATTCTATCAAC  1897

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 1898  TTGAGAAACTAATGCAGGAACAGCTGCCAGACCTGTACAGCCACTTCTGTGATCTGAACCTGGAAGCTCATATG  1971

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 1972  TATGCATCCCAGTGGTTCCTCACTCTCTTTACTGCCAAGTTTCCACTCTGCATGGTGTTCCACATCATTGACCT  2045

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2046  TCTGCTGTGTGAGGGTTTGAATATAATCTTTCATGTAGCTTTGGCTCTTCTAAAGACCTCAAAGGAAGACCTCC  2119

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2120  TTCAGGCTGATTTTGAAGGTGCTTTGAAGTTTTTCAGAGTTCAGCTTCCAAAGAGATACCGGGCAGAGGAGAAT  2193

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2194  GCAAGAAGATTGATGGAACAGGCTTGCAATATTAAAGTACCAACCAAAAAGCTGAAGAAATATGAAAAAGAATA  2267

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2268  TCAGGCGATGCGGGAGAATCAGCTGCAGCAGGAGGACCCAATGGATAGATACAAGAGGGAGAACCGAAGATTAC  2341

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2342  AGGAGGCCAGCATGAGGTTGGAACAAGAAAATGATGACCTTGCCCATGAACTAGTGACAAGCAAAATTGCTCTG  2415

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2416  CGGAATGACTTGGATCAGGCAGAAGACAAGGCTGATGTGCTGAATAAGGAGCTCCTCTTTACCAAGCAGAGGTT  2489

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2490  GGTGGAGACTGAGGAAGAGAAGAGGAAGCAAGAGGAGGAGACCGCCCAGCTAAAAGAAGTCTTCAGGAAACAGT  2563

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2564  TAGAAAAGGCAGAATATGAGATAAAGAAGACAACAGCTATCATTGCTGAGTATAAACAGATATGTTCTCAATTA  2637

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2638  AGTACCAGGCTGGAGAAACAGCAAGCAGCCAGCAAGGAGGAGCTAGAAGCAGTAAAGGGTAAGATGATGGCATG  2711

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2712  CAAACACTGCAGTGATATCTTCAGCAAGGAAGGAGCTTTAAAGCCAGTGGCCGTAAATAGAGAGGACCAGGGAC  2785

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2786  TTGAAGCAGATGATGAAAAGGACTCACTTAAGAAGCAGCTGAGGGAGATGGAACTGGAACTGGCACAGACCAAA  2859

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2860  CTGCAGCTGGTGGAAGCCAAGTGCAAAATCCAGGAACTTGAGCATCAGAGAGGAGCGCTTATGAATGAAATACA  2933

Query 1816  --------------------------------------------------------------------------  1815
                                                                                      
Sbjct 2934  AGCTGCAAAAAACTCTTGGTTTAGTAAAACCCTGAACTCTATCAAAACAGCCACAGGCACTCAGCCACTACAGC  3007

Query 1816  -----------------------------------  1815
                                               
Sbjct 3008  CGCCACAGGCTCCCCAGCCACCCAAGGAGAGCACA  3042

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