Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11497
Subject:
XM_011242063.1
Aligned Length:
2472
Identities:
1568
Gaps:
645

Alignment

Query    1  ATGGCGACCCCGGACCAGAAGTCGCCGAACGTTCTGCTGCAGAACCTGTGCTGCAGGATCCTGGGCAGGAGCGA  74
            ||||||||.|||||.|||||||||||.|||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct    1  ATGGCGACTCCGGATCAGAAGTCGCCCAACGTTCTGCTGCAGAACCTGTGCTGCCGGATCCTGGGCCGGAGCGA  74

Query   75  AGCTGATGTAGCCCAGCAGTTCCAGTATGCTGTGCGGGTGATTGGCAGCAACTTCGCCCCAACTGTTGAAAGAG  148
            |||||||||.||||||||||||||||.|||||||.|.||.||.||||||||||||||.||||||||||||.|||
Sbjct   75  AGCTGATGTGGCCCAGCAGTTCCAGTTTGCTGTGAGAGTTATCGGCAGCAACTTCGCTCCAACTGTTGAACGAG  148

Query  149  ATGAATTTTTAGTAGCTGAAAAAATCAAGAAAGAGCTTATTCGACAACGAAGAGAAGCAGATGCTGCATTATTT  222
            ||||||||.|||||||||||||||||||||||||.||||||||||||.|.||||||||.||.||.|||.|.|||
Sbjct  149  ATGAATTTCTAGTAGCTGAAAAAATCAAGAAAGAACTTATTCGACAAAGGAGAGAAGCGGACGCCGCACTGTTT  222

Query  223  TCAGAACTCCACAGAAAACTTCATTCACAGGGAGTTTTGAAAAATAAATGGTCAATACTCTACCTCTTGCTGAG  296
            |||||.||||||||.||.||||||||.||||||||||||||.||||||||||||||.|||||||||.||||||.
Sbjct  223  TCAGAGCTCCACAGGAAGCTTCATTCGCAGGGAGTTTTGAAGAATAAATGGTCAATCCTCTACCTCCTGCTGAA  296

Query  297  CCTCAGTGAGGACCCACGCAGGCAGCCAAGCAAGGTTTCTAGCTATGCTACGTTATTTGCTCAGGCCTTACCAA  370
            |||.|||||||||||.||||.||||.|.||||||||..|.|||||.|||.|.||||||||.||.||.|||||||
Sbjct  297  CCTTAGTGAGGACCCTCGCAAGCAGGCCAGCAAGGTGACCAGCTACGCTTCCTTATTTGCACAAGCGTTACCAA  370

Query  371  GAGATGCCCACTCAACCCCTTACTACTATGCCAGGCCTCAGACCCTTCCCCTGAGCTACCAAGATCGGAGTGCC  444
            ||||.||.|||||.||.|||||||||||||||||||||||||||||.||.||.|.||||||.||.||.||..|.
Sbjct  371  GAGACGCTCACTCGACGCCTTACTACTATGCCAGGCCTCAGACCCTCCCGCTCAACTACCAGGACCGCAGCACA  444

Query  445  CAGTCAGCCCAGAGCTCCGGCAGCGTGGGCAGCAGTGGCATCAGCAGCATTGGCCTGTGTGCCCTCAGTGGCCC  518
            |||   ||.||||||||.||||||.||||||||||.||||||||||||||.|||.||||||.|||.||||||||
Sbjct  445  CAG---GCACAGAGCTCTGGCAGCCTGGGCAGCAGCGGCATCAGCAGCATCGGCATGTGTGGCCTTAGTGGCCC  515

Query  519  CGCGCCTGCGCCACAATCTCTCCTCCCAGGACAGTCTAATCAAGCTCCAGGAGTAGGAGATTGCCTTCGACAGC  592
            |.|.||||.|   ||..||.||||.||.|||||||||.||||||||||||||||.||.||..||||.|||||||
Sbjct  516  CACACCTGTG---CAGCCTTTCCTTCCCGGACAGTCTCATCAAGCTCCAGGAGTGGGTGACGGCCTGCGACAGC  586

Query  593  AGTTGGGGTCACGACTCGCATGGACTTTAACTGCAAATCAGCCTTCTTCACAAGCCACTACCTCAAAAGGTGTC  666
            ||||||||.|.||.||.||.||||||.|.||||.|||||||||||||||||||.||.|||||||.||.|||.||
Sbjct  587  AGTTGGGGCCTCGTCTGGCGTGGACTCTGACTGGAAATCAGCCTTCTTCACAAACCCCTACCTCCAAGGGTTTC  660

Query  667  CCCAGTGCTGTGTCTCGCAACATGACAAGGTCCAGGAGAGAAGGGGATACGGGTGGTACTATGGAAATTACAGA  740
            ||.|.||||.|.|||||.|||.||||||||||.|||||||||||||||.|.|||||.||..|||||.||||.||
Sbjct  661  CCAAATGCTCTTTCTCGAAACCTGACAAGGTCAAGGAGAGAAGGGGATCCAGGTGGCACATTGGAAGTTACTGA  734

Query  741  AGCAGCTCTGGTAAGGGACATTTTGTACGTCTTTCAGGGCATAGATGGCAAAAACATCAAAATGAACAACACTG  814
            |||.|||||.||.||.||.|||.|.|||||.||.||||||||.||||||||||||||||||||||.||.|||||
Sbjct  735  AGCTGCTCTTGTGAGAGATATTCTCTACGTATTCCAGGGCATTGATGGCAAAAACATCAAAATGAGCAGCACTG  808

Query  815  AAAATTGTTACAAAGTAGAAGGAAAGGCAAATCTAAGTAGGTCTTTGAGAGACACAGCAGTCAGGCTTTCTGAG  888
            ||||.|||||||||||.||||..||||||||..|||..|..||||||||.||||||||||||.|||||.|||||
Sbjct  809  AAAACTGTTACAAAGTGGAAGCGAAGGCAAACTTAAACAAATCTTTGAGGGACACAGCAGTCCGGCTTGCTGAG  882

Query  889  TTGGGATGGTTGCATAATAAAATCAGAAGATACACGGACCAGAGGAGCCTGGACCGCTCATTCGGACTCGTCGG  962
            ||||||||||||||||||||||||||||..||..|.|||||||||||.||||||||||||||.|||||.||.||
Sbjct  883  TTGGGATGGTTGCATAATAAAATCAGAAAGTATGCTGACCAGAGGAGTCTGGACCGCTCATTTGGACTTGTAGG  956

Query  963  GCAGAGCTTTTGTGCTGCCTTGCACCAGGAACTCAGAGAATACTATCGATTGCTCTCTGTTTTACATTCTCAGC  1036
            .|||||.||||||||.||.||||||||.||.||||.|||||||||..|..|.|||||||||.|.||.|||||||
Sbjct  957  TCAGAGTTTTTGTGCCGCATTGCACCAAGAGCTCAAAGAATACTACAGGCTCCTCTCTGTTCTGCACTCTCAGC  1030

Query 1037  TACAACTAGAGGATGACCAGGGTGTGAATTTGGGACTTGAGAGTAGTTTAACACTTCGGCGCCTCCTGGTTTGG  1110
            |.||.|||||.|||||.||||||||||||||||||||.||||||||..|.|||||.||||||||||||||||||
Sbjct 1031  TCCAGCTAGAAGATGATCAGGGTGTGAATTTGGGACTAGAGAGTAGCCTCACACTGCGGCGCCTCCTGGTTTGG  1104

Query 1111  ACCTATGATCCCAAAATACGACTGAAGACCCTTGCGGCCCTAGTGGACCACTGCCAAGGAAGGAAAGGAGGTGA  1184
            ||.|||||.|||||||||.||.|.|||||||||||.||.||.||.||.||||||||||||.|.|||||.|||||
Sbjct 1105  ACATATGACCCCAAAATAAGATTAAAGACCCTTGCTGCGCTGGTAGATCACTGCCAAGGACGAAAAGGGGGTGA  1178

Query 1185  GCTGGCCTCAGCTGTCCACGCCTACACAAAAACAGGAGACCCGTACATGCGGTCTCTGGTGCAGCACATCCTCA  1258
            |||||||||.|||||.||.|||||.|||||.|||||.|||||.||||||..|||.||||||||||||||.||.|
Sbjct 1179  GCTGGCCTCTGCTGTTCATGCCTATACAAAGACAGGGGACCCCTACATGAAGTCCCTGGTGCAGCACATTCTGA  1252

Query 1259  GCCTCGTGTCTCATCCTGTTTTGAGCTTCCTGTACCGCTGGATATATGATGGGGAGCTTGAGGACACTTACCAC  1332
            ||.|.||||||||.|||||..||||||||||.|||||.||||||||||||||||||.|.|||||||||||||||
Sbjct 1253  GCTTGGTGTCTCACCCTGTCCTGAGCTTCCTCTACCGGTGGATATATGATGGGGAGTTGGAGGACACTTACCAC  1326

Query 1333  GAATTTTTTGTAGCATCAGATCCAACAGTTAAAACAGATCGACTGTGGCACGACAAGTATACTTTGAGGAAATC  1406
            |||||||||||.||.||.|||||||||||||||||.||.||.||.|||||||||||||||||..|||||||.||
Sbjct 1327  GAATTTTTTGTGGCGTCTGATCCAACAGTTAAAACTGACCGTCTATGGCACGACAAGTATACCCTGAGGAAGTC  1400

Query 1407  GATGATTCCTTCGTTTATGACGATGGATCAGTCTAGGAAGGTCCTTTTGATAGGAAAATCAATAAATTTCTTGC  1480
            .|||||.||.||.||.||.||||||||.|||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 1401  AATGATCCCCTCCTTCATTACGATGGACCAGTCTAGGAAGGTCCTTTTGATAGGAAAGTCAATAAATTTCTTGC  1474

Query 1481  ACCAAGTTTGTCATGATCAGACTCCCACTACAAAGATGATAGCTGTGACCAAGTCTGCAGAGTCACCCCAGGAC  1554
            ||||||||||||||||||||||.||.||||||||.||||||||.|||||.|||||.|||||||||||||..|||
Sbjct 1475  ACCAAGTTTGTCATGATCAGACACCTACTACAAAAATGATAGCAGTGACGAAGTCGGCAGAGTCACCCCGTGAC  1548

Query 1555  GCTGCAGACCTATTCACAGACTTGGAAAATGCATTTCAGGGGAAGATTGATGCTGCTTATTTTGAGACCAGCAA  1628
            |||||.||..|||||||||||||.|||||.||||||||.|||||.|||||||||||||||||||||||||||||
Sbjct 1549  GCTGCGGATTTATTCACAGACTTAGAAAACGCATTTCAAGGGAAAATTGATGCTGCTTATTTTGAGACCAGCAA  1622

Query 1629  ATACCTGTTGGATGTTCTCAATAAAAAGTACAGCTTGCTGGACCACATGCAGGCAATGAGGCGGTACCTGCTTC  1702
            |||.|||||||||||.|||||||||||||||||..|||||||.|||||||||||.|||.|.|||||||||||.|
Sbjct 1623  ATATCTGTTGGATGTCCTCAATAAAAAGTACAGTCTGCTGGAACACATGCAGGCCATGCGACGGTACCTGCTGC  1696

Query 1703  TTGGTCAAGGAGACTTTATAAGGCACTTAATGGACTTGCTAAAACCAGAACTTGTCCGTCCAGCTACGACTTTG  1776
            ||||.|||||||||||.|||.|||||||||||||.|||||.||                               
Sbjct 1697  TTGGCCAAGGAGACTTCATACGGCACTTAATGGATTTGCTCAA-------------------------------  1739

Query 1777  TATCAGCATAACTTGACTGGAATTCTAGAAACCGCTGTCAGAGCCACCAACGCACAGTTTGACAGTCCTGAGAT  1850
                                                                                      
Sbjct 1740  --------------------------------------------------------------------------  1739

Query 1851  CCTGCGAAGGCTGGACGTGCGGCTGCTGGAGGTCTCTCCAGGTGACACTGGATGGGATGTCTTCAGCCTCGATT  1924
                                           ||||||||.|||||||||||.|||||||||||||||||.||||
Sbjct 1740  -------------------------------GTCTCTCCTGGTGACACTGGGTGGGATGTCTTCAGCCTGGATT  1782

Query 1925  ATCATGTTGACGGACCAATTGCAACTGTGTTTACTCGAGAATGTATGAGCCACTACCTAAGAGTATTTAACTTC  1998
            |.||.||.||.||||||||.||.||||||||.||.|||||.||.|                             
Sbjct 1783  ACCACGTCGATGGACCAATCGCCACTGTGTTCACACGAGAGTGCA-----------------------------  1827

Query 1999  CTCTGGAGGGCGAAGCGGATGGAATACATCCTCACTGACATACGGAAGGGACACATGTGCAATGCAAAGCTCCT  2072
                                                                                      
Sbjct 1828  --------------------------------------------------------------------------  1827

Query 2073  GAGAAACATGCCAGAGTTCTCCGGGGTGCTGCACCAGTGTCACATTTTGGCCTCTGAGATGGTCCATTTCATTC  2146
                                                                                      
Sbjct 1828  --------------------------------------------------------------------------  1827

Query 2147  ATCAGATGCAGTATTACATCACATTTGAGGTGCTTGAATGTTCTTGGGATGAGCTTTGGAACAAAGTCCAGCAG  2220
                                                                                      
Sbjct 1828  --------------------------------------------------------------------------  1827

Query 2221  GCCCAGGATTTGGATCACATCATTGCTGCACACGAGGTGTTCTTAGACACCATCATCTCCCGCTGCCTGCTGGA  2294
                                                                                      
Sbjct 1828  --------------------------------------------------------------------------  1827

Query 2295  CAGTGACTCCAGGGCACTTTTAAATCAACTTAGAGCTGTGTTTGATCAAATTATTGAACTTCAGAATGCTCAAG  2368
                                                                                      
Sbjct 1828  --------------------------------------------------------------------------  1827

Query 2369  ATGCAATATACAGAGCTGCTCTGGAAGAATTGCAGAGACGATTACAGTTTGAAGAGAAAAAGAAACAGCGTGAA  2442
                                                                                      
Sbjct 1828  --------------------------------------------------------------------------  1827

Query 2443  ATTGAGGTTGAGATGTGCCTATACTGCGTT  2472
                                          
Sbjct 1828  ------------------------------  1827

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