Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11606
Subject:
NR_148880.2
Aligned Length:
1953
Identities:
489
Gaps:
1462

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGAAGTGGAGTGCGCTGCGGTGCGAGCTGGGCCGGCGGGGTGGTTCGAGAGCGCGCAGAGTCCAGACTGGCGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGGCCCGAGGGGCCGACCCGCAGCGTCCCTGGTCTCTCCAGCCCTCACTCGGAACCGCACACAGTGACAATAC  148

Query    1  --------------------------------------------ATGGCAGAAGACAAAACCAAACCGAGTGAG  30
                                                        ||||||||||||||||||||||||||||||
Sbjct  149  CCTCCCCTCCCTTGGGCTGGACCCCTCTCTACAGCTAGGAGCCAATGGCAGAAGACAAAACCAAACCGAGTGAG  222

Query   31  TTGGACCAAGGGAAGTATGATGCTGATGACAACGTGAAGATCATCTGCCCGGGAGACAGCGCAGTGGGCAAATC  104
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  223  TTGGACCAAGGGAAGTATGATGCTGATGACAACGTGAAGATCATCTGCCTGGGAGACAGCGCAGTGGGCAAATC  296

Query  105  CAAACTCATGGAGAGATTTCTCATGGATGGCTTTCAGCCACAGCAGCTGTCCACGTACGCCCTGACCCTGTACA  178
            |||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||
Sbjct  297  CAAACTCATGGAGAGATTTCTCATGGATGGCTT----CCACAGCAGCTGTCCACGTACGCCCTGACCCTGTACA  366

Query  179  AGCACACAGCCACGGTAGATGGCAAGACCATCCTTGTGGCAGACATAAACGTGACCCAAAAAAGCTTCAATTTT  252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  367  AGCACACAGCCACGGTAGATGGCAAGACCATCCTTGTGGCAGACATAAACGTGACCCAAAAAAGCTTCAATTTT  440

Query  253  GCCAAGAAGTTCTCCCTGCCCCTGTATTTCGTCTCGGCTGCTGATGGTACCAGTGTTGTGAAGCTCTTCAATGA  326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  441  GCCAAGAAGTTCTCCCTGCCCCTGTATTTCGTCTCGGCTGCTGATGGTACCAATGTTGTGAAGCTCTTCAATGA  514

Query  327  TGCAATTCGATTAGCTGTGTCTTACAAACAGAACTCCCAGGACTTCATGGATGAGATTTTTCAGGAGCTCGAGA  400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  515  TGCAATTCGATTAGCTGTGTCTTACAAACAGAACTCCCAGGACTTCATGGATGAGATTTTTCAGGAGCTCGAGA  588

Query  401  ACTTCAGCTTGGAGCAGGAAGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGAG  474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  589  ACTTCAGCTTGGAGCAGGAAGAGGAGGACGTGCCAGACCAGGAACAGAGCAGCAGCATCGAGACCCCATCAGAG  662

Query  475  GAGGTGGCCTCTCCCCACAGC-----------------------------------------------------  495
            |||||||||||||||||||||                                                     
Sbjct  663  GAGGTGGCCTCTCCCCACAGCTGAGGGGCTGGGGCTAGGGGTGGGTGGAGCCCTTTTAAAATACCCTTCCCTTC  736

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct  737  AACAACTCTCCAGCTCTGAATGGAGAAACTCTCTAGGCCATCCCCTCTTCTACCTCCTGCAACCCACCCATCCT  810

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct  811  ATTAGCCTCCCACATTCAAGGCCCGTGATACAGGGATGAGGTCAGCACCAGCAAACTCTGGACTGGTGGAAGAA  884

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct  885  TTCCCCACCAGATCTCCTTGAAGCAGAATTAGGGATCAGCATCATTAACACCTTCCCCACCCCCTCCCCCCAGG  958

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct  959  CAGACAGTGAAGAGAATCAGAAAACATGATTATGTGTCACTTTAATACAGGAAATTTAGGTGTTTTTTGGTGTT  1032

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1033  TTTGTTTTTGTTTTCTTTCCAAAGCTCACCTCGGGGACAATTCCTTGGGCTTCTCCTGAGGTAATGATTACCCC  1106

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1107  CCCACCCACAGCTGAGTCTGTGAGGCCCCATCCTTTCCCTACGTTTTCTCCCATCTTTTTTCCTCTTCAATCTC  1180

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1181  CCAGTCATCTGGTTTGTTTGTTTCTTTGTTCGTCCTGAGACGGAGTCTCGCTCTGTCGCCAGGCTGGAGTGCAG  1254

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1255  TGGCGCAGTCTCGGCTCGCTGCAACCTCTGACTCCCTGGTTCAAACGATTCTCCTGCCTCAGCCTCCCGAGTGG  1328

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1329  CTGGCATCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGCCCAGGATGGTC  1402

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1403  TCGATCTCCTCACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGC  1476

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1477  CCGGCCCCAATCATCTGTTTTTAAACAATCGTTTTTGAGCAGATAGCTATTCATTCCAGATTTCCGTGTACCCA  1550

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1551  CTCTGTTTCAGGAGCTCTTCTAGGTAAAGCTGAGATCACAGGAACAGCAGGTGACAGGCCTAGCTATAGTTAGG  1624

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1625  AATACACAAGCGGTAAAATCGAGTCCTTACAGCCATACCACAAGGTACGTCCATTTGGACTACAAGAAGAGCTT  1698

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1699  CCTTTAAAGTTCCTATTTCAGCATAAAGAGGCTGTCCTTTTTTTTTAGGAATAGTTTGGACCTTGTGCCTCCTG  1772

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1773  TGGGAGGCTGAGGACTGCAAGAGGAGAGCTAGCAGATATGCCTGTTCACCCCTCTCTGGTACTTGTGGCTTGCT  1846

Query  496  --------------------------------------------------------------------------  495
                                                                                      
Sbjct 1847  AGTATGTTTTTATGATAATCTCGGGCATTGTTTGCATTGTGTTTATTAATAGGGTTTTGTTTTTATTGTTTCCT  1920

Query  496  -----------------------------  495
                                         
Sbjct 1921  TTTTTACAGTAAAGGCTGAATGACATAAA  1949

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