Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_003572.2
- Aligned Length:
- 5815
- Identities:
- 171
- Gaps:
- 5621
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAGGCGGGGCCGGGCCGGGGCGGGGTCTCGGGCAGGGGCGGGGAGCTTACCGACCTCCCGCCCCCGCTGCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTTTCTGGCCCTGCCAGTGTCTCCGCCGGTTGAAAGCGCGTGTCTGCGTCGGGTTCTGTTGGAGTGCGTTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGCCGTGGGTCCGCGCTGCTTCCACCCAACTTCCTGTTAGAGTTTCTCTCCTGTCACAATGGCATGGTCTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCACTGCGACCTCTGCTTCCTGGGTTCAAGGATTCTCCTGCCTCAGTCTCCCAAGTAGCTGGGATTACAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCACCCGAGGACGGGTCACCATGGCTTTGGAGCACCTGGTAGTGTGGCATGTCCACAGTGAAGACCAGAGTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTTGTCCTTAAGACTGACCTGGGGAGACGTGGCTGCAGGCCATTGAGGAAGACGGCACCGAAAGCGAAGGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCCTGCTCCTCCTAAAGCCGAAGCCAAAGTGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTCCGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCCACACGCAAAAAAGAAGATCCGCATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTTCGGAGGCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCAGATATCCTCGGAAGAGCACCCCCAGGAGAAACAAGCTTGGCCACTATGCTATCAAGTTTCCGCTGACCAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAGTGGGCCGGAAGAAGATAGAAGAAAGCAACATGCTTGTGTTCTTCGTGGATGTTAAAGCCAACAAGCACCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATCAGACAGGCTGTGAAGAAGGTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTTTCCTGATAAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAACAAGGCATATATGTTCGACTGGCTCCTGATTATGAAGCTTTGGATGTTGCAACAAAATTGGGATCATCTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AACTGAGTCCAGCTGGCTAACTCTAAATACATGTGTATCTTTTCACCATAAAAGAATAATGTTTTTCATAAGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGACAACTTAATTAGAATCAAATCTATAAGCTTTAAGATTTTACATTTCTGTAAGTATAATATTAGCTTATTTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTAGAACTCAAGCAGAATAGGAATTTATGTTTGTTTTATATTCAAGTGATAACTTTGAAGACATAGTTTTATT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACACCAAAAATTTTATATTAATCTCATTTAAGTAAGTTTTATCCAAATCATGTTAACTTAAAAAACATTTGATC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGTTCCTATATTTCTAGGAGTTTGGTGAATATTTATTTATAAATGGTTATTTTTTTCCAAGCCAAGTTAGAATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGCACTTTTATAGGATTTTATAAATGAATTTTGCAGTGCTATCCGGAGTTAAGAAAATATCACATATACATTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATACAGTAATAGATATACAAACACAAATAGAGATTTCATAGCTTTCATCCTGAAATTTCAGCCATGAATCAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CATAAATATTCTGATGGTTAATTTTAGACATCTACTTGATTGGATTAAGAAACATACATAGCTGGTCAAACAAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCAGCCATGAAACAGGCATAAATATTCTGATGGTTAATTTTAGACATCTACTTGACTGGATTGAGAGACACAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTAGCTGGTGAAACACAATTTCTGGGCATATCTGTGAAGGTGTTTCTGGAAGACACTGAGATAACCCTGACCCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTGTGGATGGGCACTGATATGGTTTGCCTGTGTCCCCACCCAGATCTCATCTTGAATTGTAGTTCCTATAATCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTACATGTCGTGGGAGGGACCCAGTGGGAGGTGATTGAATCATGGTGGTTGTTACTGCCATTCTGTTTTCATGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAGTGAGTGAGTTCTCATGATCCAATGGTTTCATAAGGGGCTGTTCCCCTTTGGCTCAGCACTTCTTCTTGTTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGCCATGTGAAGAAGGACGTCTTTGTTTCCCCTTCTGCCATGATTGTGAGGCCTCTGCAGCCACGTGGAACTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCAGCCCATTTAACCTCTTTGTTCTTTATAAATTGCTCAGACTCAGGTATTTCTTCACAGCTGTATAAAAATGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATGAATACAGGCACCATCCAATTGGTTGAGAGCCCAGATAGAATAACAAGGAAGAGGAAAGGTGAATTATCTCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGAAATTGAAACATCCTTCTTCTCCTGCCCTTGACATCAGAATCAGTGTCTCAGAGCTTTGGCCTCAGAATCAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGTTACACCATTGGCTTCCCTGATTCTGAGTCCTTTATATCTGGAGTGAGTCATGCTGCCAGCTTTCCTGGTTC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCCAACTTGGAGACAGGCTATTGTGTAACTTCTCAGCCTCCATAATTATGTGAACCAATTCCCCTAATGAGTCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCTCTCATCTATCTACATATATCCTATTGATTCTGCCTTTCTGGAGAACCCTGACTAATGTTATTACAATAATA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CAAAATTCACTAGTTTATATAGAAGACTTGGTTTTTGTCTTTGCCCCATTTTGTATTTGTATTATAACTGTGTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCTGGAAAATGGAACAAGTTTTTATCTTCTTCATATGAGGGCCAAAGCTTTTTTCTCACCAATATTTTTGGAGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTTTAAGATTTTCTTTTGTTTGGACATACAATCTTATGGAGGCTGAGAAATAAAATTTTTTCTATTTTATTTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCAGCCCCAGATGTTTGCTTTTGCAGATTCTTGAGCACATTGAGAGCATGGAGAGCACTCCAAGGCATGGAGTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGGTGCCTAAAGTTTCAGTGATTACAGGGAGTTGAGAGACTCAACTGGGAAAGGAAAAGTCTAAAAGGAGGCAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTGGAAGATAAAAATTTTCTCAAAGGAGCGATTAAATTTCTAAATAATTCTTAGTAAAATCATGTAAACAGGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAGGAAATAGAATTAGTTCCATATTGGTGGAACACATAGCAGAGGTTTGAGAAGGGAGAATTTAGTCAACTGAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAGTTCTCATGAAAGGAGCAAGTTCAAGATCACAGAGACACCTTGAAACAAAAAGCCAGGAATAACTTCCAACC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAAGAGGAGAACAGAGAGGCCTCAAAACCAAAGCTAGGATAAGAAACTTGTAGCCCAAGAGTTATCTTCCAGAC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAAGAAGCCTGAGATTCCAACGCAGCTTCAGAGAGTGCTCACTCAAAATGTTACTGAAACTGAAGGCTTTTTAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TGACTTAGCCATGCCTGCAAAAGGCATTCCCTAAGGTGGCACAGAAGACGGAGCCCCCATATCCAAAGATAGCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AAGGAGAAAGAAAGACCCCTGTTGCCAGAGCCAGTGGGCAAAGGCAACAGAAAAGGAGACAAGGGTCCTAATGG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GATGAGATCCTTTCGGATTTAGGCTTTTATACAAACTCCTGAGAACTGGCGGGTTGACAGCCATAAATGGGGTA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CCAAACTTTCTACTCATTGGATTACAAGTTCTCAGGCATCCAGAATGATGAACAAAATGACAATTTCTAGGGCT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TCTGTGGGAGAGTATGGAAAGGTCTTTTTGAACCTTTTAATGCTGTCAACGGAAGAATGATGAGGTTCATAAAT 3478
Query 1 ---------------------------------------------------ATGGAGTCTCACTC-TGTCACCC 22
|..||||.|||||| |||..|||
Sbjct 3479 TTGGAAAGGAGACATTTCTTCATTTTTATGTTTATTTTTATTTTTTTTGAGACAGAGTTTCACTCTTGTTGCCC 3552
Query 23 AGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTC 96
|||||||||||||.||||||||||||||||||||||||||||..||||||||||||||||.|||||||..||||
Sbjct 3553 AGGCTGGAGTGCAATGGCGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTC 3626
Query 97 AGCCTCCCAAGTAGCTGGGATTACAGACGTGTG----CCACCATACCTGGGTAA-TTTTTGCATTTTTAGTGGA 165
|||||||..|.|||||||||||||||| || ||||||.||||||.||| ||||||||.|||||||.||
Sbjct 3627 AGCCTCCTGATTAGCTGGGATTACAGA----TGCCCACCACCACACCTGGCTAATTTTTTGCAGTTTTAGTAGA 3696
Query 166 GAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT----------------------------------------- 198
||..|.||||||.|||||||||||||.||||||
Sbjct 3697 GACAGGGTTTCATCATGTTGGCCAGGCTGGTCTGAAACTCATGAGCTCAGGTGATCCACTTGCCTTAGCCTCCC 3770
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3771 AAAGTGCTGGGATTGCAGGCATGAGCCACCCAACCAGTGAGAGATTTATTTCCTATAAAGGGTTGTAGCCTGCA 3844
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3845 GGGTTGTCCTTCTGACAGGCTGGGAAGCATAGCCTCCAGCCAGAAGCCAGAAACAGACTCTTCAAGGAGGAGGT 3918
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3919 AAAGGAAATAGCAATTTATGCTGACTGGAATGGCCAAATACATTTATTTAATAAGCTCCAGGAGGAGTCATGAA 3992
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3993 TATTTATGGAAGGAGAAATGCATGCATGCACAATTGAGTTTCTGGCTTCTTCATGGGTCCCATGTACAAAAAAT 4066
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4067 GGCAGTGTTAGCATGATCCCAGGGTGGAGTTTTCAGCCCTCTGACATTAAAAGGTGAAGCAGAGGACATGAAAA 4140
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4141 CTCGCTCTGTGCATCCTCTGTACGCTGGCCAGAACCTCTCTGTTGTGGGTGGTCTCTTATCAGGCAAGAAAGGA 4214
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4215 GAGGTTGATATCGGTAGTGGAGGCTTTGAAAGGGCTGGTTTCTGTTAAATCCTTAGGGAAGAAAGCCTCATCAT 4288
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4289 GGTTAGCAAAGGAGTGGGTTTAACGATGTGTATGTTAACCCCATCATCCCATCCTAGCAAAGCTGAGAACTCAG 4362
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4363 TTTTGAAAGTTACTCTGTGGTCCCCTCAGCCAAGAGTGGTTCTGTTCAGTCAGTTGGGAGCTTATAATTTAATT 4436
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4437 TTTGTTTATCAATGCTAATGCGAAAGAGTACGCTGTCTTCATGGCAGCTGAATTTGCAAGAAACTCCTTGGATG 4510
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4511 GGGTTAATGGCAGCTGTATTTTTCTGGGAGCTCTGCTTTAATTGGACAAAGTAAGTTGTGGTAAGATTTCTTCT 4584
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4585 TTTATCTTCAGTATCTCAAATGTTTTCATTTAAATAATCTTTATAACAACTTTTGATGTCTGAGTGGATTCCCA 4658
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4659 TACAGTCATCTATTGTAAGACTTTCTGATTCCGTTTTTTTCCTTTGGTCATTATGAATAGGGCTTATGTAAATA 4732
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4733 ATTGCATGGTAGCTTTTGATTGGAAATAACATCAAAGTAGTTGTCAAAATACTTAGGAATGTTATTTTTGGATT 4806
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4807 GTAAGGTGAGACTTGTTTAGCTTTGGAAAAAAATGCCCAACTTGTAATAGGGGAGGAAAAATAATTTTCTGTTT 4880
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4881 TCGGAATTCTTAGATGGGATGCTCTGTAAAAACTGACAGATTAAAATGAGAAAAACAGAAAAGTTGAAAAACAC 4954
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4955 GTATACCTTATGGTTACATGGGAGATATTCAGGGAAAAATGAGTAAATCTCCAACAGGTGGCTTTCAATTCAAG 5028
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5029 CATAAATACTGTCTTCAACTTAAAGAAAGAAGATTTGAGGTGCAGTATTGGGGAGTTAACCAGCAAAAGCACAT 5102
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5103 TAGACAAGGGTAAGGTTCATTATACAGACTTAAGTCCATGCATTCTCCATTGATAAGACTCTTTAGTGATTTAG 5176
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5177 TTATCCTTCTCTTCTTGGTGTCGAGAGAGGTAGCTTTTAAATGGTGATTTCCTTTATAGATGTAAATTTTCCTT 5250
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5251 ACACAAGTGTAACTTCTCTGTTTTCACAACTTCCTTTGTTAGCATTTTTTTTTTTCAAAATAATTAGCTTGGAA 5324
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5325 TAATTCTTAAGCCAAAGGGACATATTTTGGGGTTGCATATTCTGGTTTCCTACCATTATATTTTGGGGTGGCAT 5398
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5399 ATTTTGGTCTTATACACTGTGTTCCACCGGCAATGAAAAGAGTTCTTGTTTTTCCTCCAGCAATTTGTCATTTG 5472
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5473 TTAAAGAGTTTAGCAGTTCTAAGAGATATAGACCAGCTGTGCTATCTTTTTGTGGTTTTCAGTTCTCTAGTATG 5546
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5547 TTGAGCATCTTTTTGTAAGTGTACTTGCCATCTGTAGATCTTCTTTGGTGAGGCGTCTGTTCAGATCTGTGTGC 5620
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5621 ATTTTTAATTGGGCTGTTTAACTTATTGTTTAGTTTTAACAATTTTTTATGTATTTTGAATACAAATTCTCAGA 5694
Query 199 -------------------------------------------------------------------------- 198
Sbjct 5695 TCTGTATTTTGCAAATATTTTCTTCAATATGTGGCTTGTCTTTTGGTTCTCTTAACAAGGTCTCTTCCAGAGTA 5768
Query 199 ------------------------------------------- 198
Sbjct 5769 TAAACTGTAAATATTAAGAAAAAAAAAAAAAAAAAAAAAAAAA 5811
