Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_033849.1
- Aligned Length:
- 2743
- Identities:
- 171
- Gaps:
- 2545
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCGCTAGGAAACGAGCGAGCCCGACGCCAGGGGCGGAGCTCTGGCCTCCTCGCCGAGTTGGGGGAGGCAGGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGACAGGAGAATGGACAGTAAGAAGGGGAGACCCAAAGCTGCAGCTGGGAAGTGGCAGACGCTCCACCCTGGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAAGACAAGAGCTGCTGCTGGGAAGCCCGGGGAGAACCGCCCGCCGCAGAGGAAAGCGGGCTGGCAGGCGAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCCCGCGTCGGCTGAGAGCCCACAGGCCCCCACAGATGGAGTTTCGCTCTGTTGCCAGGCTGGAGTGCACTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGCTTGGCTCACTGCTACCTCCGCCTCCCAGGTTCAGGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTACAGGCACCCACCACCACACCCAGCTAGTTTTTGTGTTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATGGTCTCGATCTCTTGACCTTGTGATCCGCCCGTCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCAGGCCTGGCTCCTTTTCCACTTTCATGGACCCTCGTGATTGCATTGGATCTCCCCGGGTAATCTGGGATGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTTCCTGGCCTAAGGTCAGCTGATTAGCAACCTTAGTTCATCTGCAGTCTCCATTCTCTTTTTGCTGAATCAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCAAGTATTCACAAGTTCCAGGGGGCAGGAGGTGGACATCTTTGGGGGACATTATTCCGCCCACCAGAAAACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAGGAGCAGCCACAGCCCCAAGACGAGGCAGGGAAGGAGTGCTGCTGTCTGCCGGTGAAGATGAACTGCTTCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACCCTCCCGAGCGAGGATATTGAGAAGAAAGAATTTGCCAAGATGCTAGTCACACACCAAGTACAGAGGCTATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGGTCGGCTGCAGCAAAAAGACCACTCGCGGCGTGGCAGCTCTCACTGGCCCTGCTGCCTCTTCAAGTTGACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCAGTCCATCACCCACGGTCATTATTAATTTGTTTTTGCAAAGGCCAGGCAGGTGAATCTAATGGAGATGGAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCACCACACCTGCTTCCCTGGTCTCTGATGTTGGTGTTAACCTCTGCAATTCCTCAAGCAAAGCACTCCTTCTA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCAGGCTCACTGTCTTGCTGGAGGGAGGAAGTTCCACAGGCTCTCACTTGGTTCTTTCTGCCGTAACAACCCTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACTCCTCCGGCCAAGGAGCCAATGTGAGCATTCAGCTGGCAGCTAAGAATGTGTATCCCAATAAACAGGGCAGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTACAGACCCACTGGACCCACTAGAGATGGACTTGGGCCACAGTGCCTTCCATGACTTCAGTAAACAGAGGGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGTGGTGATCTTGTCAAAGTCCTGGCGTCAATGTCAGTGTCCGGCTACACACCATGTTCCCGTCCTCGAAAAGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCTCTGTACCCCTCTATGTTGGTGACACAACCCTGGCAAATGGCCACAGACTCCTTTGGGGACAGAGTAGGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGTAACTGGTGGGAGTGGTTGGCATGCTTTGTATTGGGAGAGCCGCACGCCCTAGGGCTTCCAGCCTCCTCTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTTTGGCAGCTGTGAGTCTGAATTTCACTCAAATCTGGAAACTGGGTGAGAGACTGTGGCAGCTGCTGTCCGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGGCAGAGCCTGACGTGTCTCTGATCATACTCACTGGGTCAGCAACACCCTACTGACCTTGTCCAGAATCCCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CATCCCAGTTGATATCAGGGCAATCAGTTTCCTGGCTGTTTTCCCCAATATCAACCCGGGCTTACAGAAGACAG 1776
Query 1 -------------------------------------------------------------------ATGGAGT 7
|||||||
Sbjct 1777 TCACCACAGAGCTCCTGCCAGGAGTTCACTCATTCGTGCATTTCTTCCTTTTTTTTTTCTTTTTGAGATGGAGT 1850
Query 8 CTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAG 81
|||.|||||||.||||||||||||||||||||.|.|||||.||||||.|||||||||.||||||||||||||||
Sbjct 1851 CTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGAGCGATCTCGGCTCATTGCAACCTCCGCCTCCTGGGTTCAAG 1924
Query 82 CAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGGGTAATTTTTGCAT 155
|.||||||...|||||||||||||.|||||||||||..|||..||||||||||||.||..|.|||||||||.||
Sbjct 1925 CGATTCTCTTGCCTCAGCCTCCCAGGTAGCTGGGATAGCAGGTGTGTGCCACCATGCCCAGCTAATTTTTGTAT 1998
Query 156 TTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT------------------------------- 198
|||||||.||||.||.||||||.|||||||.|||||.||||||
Sbjct 1999 TTTTAGTAGAGATGGGGTTTCATCATGTTGCCCAGGCTGGTCTCAAATTCCTGACCTCAGGTGATCTGCCCTCA 2072
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2073 GCCTCCCAAAGTGCTGGGATTACAGGCTTCAGCCACCACACCCAGCCTCATTCATACATTTCTTATTGTTGTTG 2146
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2147 TTTGAGACAGGGTCTTTCTCTGTCACCCAGGATGGAGTGCAGTGTTGTGATCATGCCTCAGTGCAGCGATCATG 2220
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2221 GCTCAGTGCAGCCTCAAACTCTTGGGCTCAAGCAGTGCTCCAACCTCAGCCTCCTGAGTAGCTAGGACTATAGG 2294
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2295 CACACAGCACCATGCCCCGGCTATTTTTTTATTTTGTAGAGATGGGGTCTCACTATGTTGCCCAGGCTAGTATT 2368
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2369 GAACTCCTGGCCTCAAGCAATCCTCCCACCTCGGCCTCCCAAAGTGCTGGGATTAAAGGCGTGAGCCACCGTAC 2442
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2443 CTTGCCCTTGGTGGAATCTTTAGGGTTTTCTATTCATACATATAAAATCATATCATTGGCAAACAGAGATAATT 2516
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2517 TTACTTCCTCCTTTCCAATTTGGATGCCTTAGATTTCTTTTCCTTGCCTAACTGCTCTGTCTAGAACTCCCAGC 2590
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2591 ACTATGCTGAATAGAGTGGCAAGAGCAGGCATTTGCCTTGTTCCTAACCTTAGAGAAAAATCCTTCAGCCTTTT 2664
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2665 ACCATTGAGGATGATGTTTGCTGTTAGTTTTTCATAAATGATCTATATCAGGCTGAATAAATTTCTATTTCTAA 2738
Query 199 ----- 198
Sbjct 2739 AAAAA 2743
