Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- XR_001755092.1
- Aligned Length:
- 3487
- Identities:
- 172
- Gaps:
- 3290
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGGCGTGAGCCACCGCGGCCGGCCTGTCTGCACTCTTTATTCTTTAACTTTCGTTACAGTGTTACATACAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAGTGCACAGAGCAGAAGGGGATGGCTAGCAAGTTACCACAACGCCTGGCAGAGAAGCAGAACTCTGGACATCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGAGCCCTCCTGGCGCCCCGCCCTGCCCCCCCGGGGCTGCTCTGTTTTTCATCTGGCTTTCCTACCAGTGCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAACGGAAGGAGGACTTTTTCTGGAAAATCAGTGTCTGCGCTTCCCACCGGGCGGGTTGGACCTGAAGACACG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCGTCCCGCGGAGAATACGCGACACCGTGACCGACACGCGGCAGTCCTGCCTTAGAAGCGCGGCCGGGCCGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCGGGACCCGCAGCCTGGGGACCTTCCTCGCGCCCCAGAGGGGTCTGGGTGGAACGGGAAAATTAAAAATTAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAAAAAAAAAAAACGGAAAGGCAAGAAAGGAAGAAGTCCGCTGGAGAACTCCGTGCGAAGGCCCCACTCCTAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACGTCCCCGGCCTCAAGGGGAGACGAGGAAGAGAGCGGCCCAACCTGGGCCTGGGAGTATCGTGACCCATGTGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAAAGAACTAAAACGTGGCGTTAAAAATAAGTGGACGGGACACCATCAGAACTGTTTTTTTTGTTTGTTTTGT 666
Query 1 ------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCC 68
|||||||||||||||||| .|||||||||||||||.|||||.|||||.||||||||||||||||..||
Sbjct 667 TTTTAGATGGAGTCTCACTCTGTC-GCCAGGCTGGAGTGCAATGGCGCGATCTGGGCTCACTGCAACCTCCACC 739
Query 69 TCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCC--CA--------AGTAGCTGGGATTACAGACGTGTGCCA 132
|||||||||||||..|||||||..||||||||||| || .||||||||||||||||.|..||||||
Sbjct 740 TCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGCACCCTCCTGTGTAGCTGGGATTACAGGCACGTGCCA 813
Query 133 CCATACCTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGTTGGTCT-------- 198
|||...|||..|||||||||.||||||||..||||.||.||||||||||||||||||||.||||||
Sbjct 814 CCACGGCTGCCTAATTTTTGTATTTTTAGCAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTGC 887
Query 199 -------------------------------------------------------------------------- 198
Sbjct 888 TGACCTCAGTTGATCCACCCGCCACAGCCTCCCAAAGTTGGAATTAAAGGTGTGAGCCACCGCACCCTGCCACA 961
Query 199 -------------------------------------------------------------------------- 198
Sbjct 962 CTGTCAGAATTGAGGAGGCAGATATGAGAAACATCTTAGGAATAAAAAAGAATAAATGAATTTGAAAACAATGA 1035
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1036 ATAGGCTAAGCAGCAAATTAGATGCAAATACATATAAAATTAGCGAACTGGAAGATATATTTGAAGAAGTCACC 1109
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1110 CAGAGTGCAACACAGACAAAGGGTGAAAAATAAGTTCTCTTTAGTGGTTAGCATTGTGATGGAGTAAAAAGGCC 1183
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1184 CCACGTGGCCTAACTGGGGCTCTAGGAGGAAAAAAAGTGGATTAAATGGGCCAAGGTAATAGGGAAGAGATGTG 1257
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1258 AATGGAAAGGCACCATTTCTCAGACTCTGAAGCTTCAGAGAATCTAAGCAGAGTGTGTTTGAAGAAAACCACAT 1331
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1332 CTGGACACACCTGTTGTAACTGGAGATTCTCAAAGACAAAGATTATAAAAGCAACTGGAGAGAAGAATGAGTAA 1405
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1406 CTGTTGAACGGCACTGAAACCAACACCTAAACAGCAATAGGGGAAGCCGTGAGAAGCAGAGGTCTCAAATACCT 1479
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1480 GGGAGGAAACAGCTTTCAACAAGAACTGTTCATCCCATGATATACCTTTCAAGAATGAGAGTAAAACAAAAGCA 1553
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1554 TTTGTAGTTAAACAAAAACTAAGACTTCCACTTTGAGCCACGACAGAATAACTGGTCCAGATTTACTCTCTCAC 1627
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1628 CTTAAACAACTAGAAAGAAGGACAAAATATATGCAAAAATGTCTTTTGAGACATGGGACAGCGGTCAGAATTGG 1701
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1702 GCAGCAGTTACTGAGAGAGGAGAAACTAATGAGGAGAGACCTTCCAGCCCCTGGCTACTGTCTGGAGAGGAGCT 1775
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1776 CCAGGCCAGAGCCTGAGAGGGGGTACCCAGATAAGGCGGGGTCTTGCTGCGGCAGAGACTGAGTTATAAGTTGG 1849
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1850 GGGAAGCCAAGGCAACCAGAATTTTCAGGGCTGAGTACAAGAGAAGAGGGAGCTACAGAGAGAGAAAGAGATGG 1923
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1924 GGAAGGAGAGAAAGAGATGGGGGAGGAGAGAAAGAGATGGGGTGAGAGAAGGCGAGAGGGAGACCCACCCAGAG 1997
Query 199 -------------------------------------------------------------------------- 198
Sbjct 1998 AACTGTGGCTGAGCACTGATCTACGCATGCCTATGAAGAAATTACCTGAGGGGAAAAGAACCACTAGAAAGGAG 2071
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2072 GAGGCAGAACATCCGGAGGAGCTCGAACAGGGCTGGGATTGTTCGTGTTCCCACAAGCCAGAGTGGAAAGACCT 2145
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2146 CCTAATTCAAAGGGCATCGTGGAGGCTGCAGCAGGGTAGTGTGTCAGCAATGGGGCCAGATTAGCCCCAGGCTG 2219
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2220 AAGGACCCACACTAACGAGGCTTCTAAGCAATCCTCAAAAGGATTCCAACACAACCCAAGAATATTCAAAGTAA 2293
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2294 TACCAAAAATTCAGCACCCACCCATGTACCTTTCACAATGTCTATACCATTCAATCAAAAACTATCACACATAG 2367
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2368 AAGCAGGAAAATATGATTCATACCCAGGGTCAAAATCCATCAATAGAAACAGACCCAGAGAAGACAGATACAAT 2441
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2442 GGGATTTGTATACAAGAACAGTGAGGCAGTGCTAACTAGATTTCATATGCTCAAAAAGGTAGAAGAAGGCATGG 2515
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2516 GCGTGATGAAGAGGTTCTTTTTCAATGAACATAAAACAATTGCCAACATTCCTTAACAGCATATAAAATAGTGG 2589
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2590 TACATCTTAAAAGTGGTGCTACCTTAAATTTTTGGTGAAATGTGGTAACAGCATCTATTACAACCTGCCTGGTG 2663
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2664 TTTATCCCCCTTGGAATGTAACCATTACTTTAATTTATTTATCATTTTAGAATGAAGTTGGGAGCAAGAGGGAG 2737
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2738 TGGACTCTCATTCACTGACTTACTCATTCTGTTATCACATGCGTACTGAAAATTCAGAGTAAAACCTCGTACTG 2811
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2812 TGCAACCCAGAATTTACCAAGATGAGAATAATGAGATATATAAACCAATAACTCTACACAAAGTGCTGCAAGAG 2885
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2886 AAGATTAACATGAGACAGAAGGAGTTCAGAGGCGAGGAGAAGTCAAGGCTGGCCACACAGCAGAAGAGGAACTT 2959
Query 199 -------------------------------------------------------------------------- 198
Sbjct 2960 TGGCTGGGCTTGGATGATGGGGCATTTGGACAAGTGAAGCAGTGGAGAATTTCTTTGAGGGACCTGGGCCTCCA 3033
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3034 CCAGCCCTTTGTATGAATTAGAAAGGGACTTTTTCTCTGTTGCCCAACACTGCAGGTGCACTACTTGGGAAGTG 3107
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3108 AACGGCACCTTTGAAATGAGGTGCTACTGAAACAAAAGCCTAAAACTGGGGAAATCATCTTAGGGATGGAAGTG 3181
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3182 TGGGCTAAGAGACCTCAATGAGACTGATAGTAAAGTCTCAAAGTTCAGTGAGGGAACACCTGGAAAGATGGAAA 3255
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3256 AGAGTGACTGCTGTCATGTAGCAGCAGAAACGTTAGTTAAAATATCCTTTGGGGAAACCAGGACACCAAAAAAT 3329
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3330 ATACCACATGAGCTTGTGGGTTTGACTGAAGAGACTTTGAGGCAGACTGTCATAATTGGCAACTGCTTTCTTTT 3403
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3404 AGCTGTGTGTAATATAGATAAAATAATGAAGGAATGTCCCATTTTTGAGCAAAATTTAAAGAAAATATAAAGGT 3477
Query 199 --------- 198
Sbjct 3478 GTCAGGACT 3486
