Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11660
Subject:
NM_001346738.2
Aligned Length:
1290
Identities:
1272
Gaps:
18

Alignment

Query    1  ---------------ATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCGT  59
                           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCCTTGGAAGGGATGAGCAAACGGAAGAGAAAGAGAAGTGTCCAGGAGGGAGAGAATCCTGACGACGGCGT  74

Query   60  TCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCTTATTTCGCGGCGAACACCATTCCA  133
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCGCGGGAGTCCGCCGGAAGACTACAGGCTTGGACAGGTCGCCAGTAGCTTATTTCGCGGCGAACACCATTCCA  148

Query  134  GAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAGATTCAACCCGTGTACGTGCCTGTG  207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GAGGTGGCACCGGTCGGCTGGCGTCCCTCTTCAGTTCTCTGGAGCCCCAGATTCAACCCGTGTACGTGCCTGTG  222

Query  208  CCTAAACAAACCATCAAAAAAACGAAACGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTC  281
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTAAACAAACCATCAAAAAAACGAAACGGAATGAGGAGGAAGAAAGTACATCCCAGATTGAAAGACCACTTTC  296

Query  282  GCAAGAACCTGCCAAAAAAGTGAAAGCGAAGAAGAAACACACTAACGCAGAAAAAAAGTTGGCAGACAGGGAAA  355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCAAGAACCTGCCAAAAAAGTGAAAGCGAAGAAGAAACACACTAACGCAGAAAAAAAGTTGGCAGACAGGGAAA  370

Query  356  GCGCTCTAGCGAGTGCTGATTTAGAAGAAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCT  429
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCGCTCTAGCGAGTGCTGATTTAGAAGAAGAAATTCACCAGAAACAAGGGCAGAAAAGGAAAAATTCTCAACCT  444

Query  430  GGTGTTAAAGTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCA  503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGTGTTAAAGTAGCAGATAGAAAAATACTTGATGACACAGAAGACACAGTTGTCAGTCAAAGAAAGAAAATTCA  518

Query  504  AATCAACCAAGAAGAAGAGAGATTAAAGAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTACATGTAATA  577
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AATCAACCAAGAAGAAGAGAGATTAAAGAATGAGAGAACTGTGTTTGTTGGGAATTTGCCTGTTACATGTAATA  592

Query  578  AGAAGAAGCTGAAGTCGTTTTTTAAAGAGTATGGACAAATAGAATCTGTACGATTTCGTTCTCTGATTCCAGCA  651
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGAAGAAGCTGAAGTCGTTTTTTAAAGAGTATGGACAAATAGAATCTGTACGATTTCGTTCTCTGATTCCAGCA  666

Query  652  GAGGGAACGCTATCCAAAAAGTTGGCAGCAATAAAACGTAAAATTCATCCTGATCAGAAAAATATTAATGCCTA  725
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGGGAACGCTATCCAAAAAGTTGGCAGCAATAAAACGTAAAATTCATCCTGATCAGAAAAATATTAATGCCTA  740

Query  726  TGTTGTGTTTAAGGAGGAGAGTGCTGCCACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTC  799
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGTTGTGTTTAAGGAGGAGAGTGCTGCCACGCAAGCATTGAAAAGAAATGGGGCCCAGATTGCAGATGGATTTC  814

Query  800  GTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTAT  873
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GTATTAGAGTTGATCTCGCATCTGAGACCTCATCTAGAGACAAGAGATCGGTTTTTGTGGGGAATCTCCCTTAT  888

Query  874  AAAGTTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGA  947
            |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  A---TTGAAGAATCTGCCATTGAGAAGCACTTTCTGGACTGTGGAAGTATCATGGCCGTGAGGATTGTGAGAGA  959

Query  948  CAAAATGACAGGCATCGGCAAAGGGTTTGGCTATGTGCTCTTTGAGAATACAGATTCTGTTCATCTTGCTCTGA  1021
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  960  CAAAATGACAGGCATCGGCAAAGGGTTTGGCTATGTGCTCTTTGAGAATACAGATTCTGTTCATCTTGCTCTGA  1033

Query 1022  AATTAAATAATTCTGAACTCATGGGGAGAAAACTCAGAGTCATGCGTTCTGTTAATAAAGAAAAATTTAAACAA  1095
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034  AATTAAATAATTCTGAACTCATGGGGAGAAAACTCAGAGTCATGCGTTCTGTTAATAAAGAAAAATTTAAACAA  1107

Query 1096  CAAAATTCAAATCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCAGA  1169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108  CAAAATTCAAATCCACGATTGAAGAATGTCAGTAAACCTAAGCAGGGACTTAATTTTACTTCCAAAACTGCAGA  1181

Query 1170  AGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAA  1243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182  AGGACATCCTAAAAGCTTATTTATTGGAGAAAAAGCTGTTCTCCTTAAAACGAAGAAGAAAGGACAGAAGAAAA  1255

Query 1244  GTGGACGCCCTAAGAAACAGAGAAAACAGAAA  1275
            ||||||||||||||||||||||||||||||||
Sbjct 1256  GTGGACGCCCTAAGAAACAGAGAAAACAGAAA  1287

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