Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12042
Subject:
XM_011539871.3
Aligned Length:
2273
Identities:
1580
Gaps:
679

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAAGAAAAAACACAAATCAAGACATTTTTGGGTTCCAAGTTGCCAAAGTATGGAACAAAATCTGTAAGAAG  74

Query    1  -------------ATGCCAAATGGGACACCTGTTAATTTATTAGGAACTTCCAAGAATAGTAATGTCAAAAGTT  61
                         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TACATTGCAGCCAATGCCAAATGGGACACCTGTTAATTTATTAGGAACTTCCAAGAATAGTAATGTCAAAAGTT  148

Query   62  ACATCAAAAATAATGGCTCTGATTGTCCATCATCTCATTCATTTAATTGGAGGAAAGCAAATAAATATCAGCTT  135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACATCAAAAATAATGGCTCTGATTGTCCATCATCTCATTCATTTAATTGGAGGAAAGCAAATAAATATCAGCTT  222

Query  136  TGTGCACAAGGTGTCGAAGAGCCTAACAATACTCAAAATTCACATGATAAAATAATTGATCCTGAAAAACGTGT  209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGTGCACAAGGTGTCGAAGAGCCTAACAATACTCAAAATTCACATGATAAAATAATTGATCCTGAAAAACGTGT  296

Query  210  TCCTACTCAAGGAATGTTTGATAAAAATGGGATAAAGGGAGGTTTGAAAAGTGTTTCTTTATTCACATCAAAGT  283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCCTACTCAAGGAATGTTTGATAAAAATGGGATAAAGGGAGGTTTGAAAAGTGTTTCTTTATTCACATCAAAGT  370

Query  284  TAGCAAAGCCATCCACTATGTTTGTGTCATCTACAGAGGAGTTAAACCAAAAGTCTTTTTCTGGACCATCTAAT  357
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TAGCAAAGCCATCCACTATGTTTGTGTCATCTACAGAGGAGTTAAACCAAAAGTCTTTTTCTGGACCATCTAAT  444

Query  358  TTGGGTAAATTCACCAAAGGCACATTATTAGGAAGGACTTCATATTCTTCGATCAATACTCCAAAATCACAGTT  431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTGGGTAAATTCACCAAAGGCACATTATTAGGAAGGACTTCATATTCTTCGATCAATACTCCAAAATCACAGTT  518

Query  432  GAATGGATTTTATGGAAACCGATCAGCTGGTAGCATGCAAAGGCCTAGAGCGAACTCCTGTGCCACCAGAAGCA  505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAATGGATTTTATGGAAACCGATCAGCTGGTAGCATGCAAAGGCCTAGAGCGAACTCCTGTGCCACCAGAAGCA  592

Query  506  GTTCTGGAGAAAGCTTAGCTCAATCCCCAGACAGTAGTAAATCTATTAATTGTGAAAAAATGGTAAGGTCACAA  579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTTCTGGAGAAAGCTTAGCTCAATCCCCAGACAGTAGTAAATCTATTAATTGTGAAAAAATGGTAAGGTCACAA  666

Query  580  AGTTTTTCACATTCCATTCAGAATTCATTCCTTCCACCTTCATCTATAACCAGATCACATTCCTTTAATAGAGC  653
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGTTTTTCACATTCCATTCAGAATTCATTCCTTCCACCTTCATCTATAACCAGATCACATTCCTTTAATAGAGC  740

Query  654  TGTGGATCTTACAAAGCCTTATCAGAACCAACAGCTATCCATTAGAGTGCCTCTACGGTCAAGTATGCTAACAA  727
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGTGGATCTTACAAAGCCTTATCAGAACCAACAGCTATCCATTAGAGTGCCTCTACGGTCAAGTATGCTAACAA  814

Query  728  GAAATTCCCGGCAGCCAGAAGTACTCAATGGGAATGAACATTTGGGGTATGGATTTAATAGGCCTTATGCTGCT  801
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAAATTCCCGGCAGCCAGAAGTACTCAATGGGAATGAACATTTGGGGTATGGATTTAATAGGCCTTATGCTGCT  888

Query  802  GGTGGAAAGAAGTTGGCTTTACCAAATGGCCCAGGTGTAACTTCTACTTTAGGTTATAGAATGGTTCATCCCTC  875
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGTGGAAAGAAGTTGGCTTTACCAAATGGCCCAGGTGTAACTTCTACTTTAGGTTATAGAATGGTTCATCCCTC  962

Query  876  TCTACTGAAATCTAGCCGATCTCCATTTTCTGGGACTATGACAGTTGATGGAAATAAAAATTCACCTGCTGACA  949
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCTACTGAAATCTAGCCGATCTCCATTTTCTGGGACTATGACAGTTGATGGAAATAAAAATTCACCTGCTGACA  1036

Query  950  CATGTGTAGAGGAAGATGCTACAGTTTTGGCTAAGGACAGAGCTGCTAATAAGGACCAAGAACTGATTGAAAAT  1023
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CATGTGTAGAGGAAGATGCTACAGTTTTGGCTAAGGACAGAGCTGCTAATAAGGACCAAGAACTGATTGAAAAT  1110

Query 1024  GAAAGTTATAGAACAAAAAACAACCAGACCATGAAACATGATGCTAAAATGAGATACCTGAGTGATGATGTGGA  1097
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GAAAGTTATAGAACAAAAAACAACCAGACCATGAAACATGATGCTAAAATGAGATACCTGAGTGATGATGTGGA  1184

Query 1098  TGACATTTCCTTGTCGTCTTTGTCATCTTCTGATAAGAATGATTTAAGTGAAGACTTTAGTGATGATTTTATAG  1171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGACATTTCCTTGTCGTCTTTGTCATCTTCTGATAAGAATGATTTAAGTGAAGACTTTAGTGATGATTTTATAG  1258

Query 1172  ATATAGAAGACTCCAACAGAACTAGAATAACTCCAGAGGAAATGTCTCTCAAAGAAGAGAAACATGAAAATGGG  1245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ATATAGAAGACTCCAACAGAACTAGAATAACTCCAGAGGAAATGTCTCTCAAAGAAGAGAAACATGAAAATGGG  1332

Query 1246  CCACCACAGGATATGTTTGATTCCCCCAAGGAAAATGAAAAAGCCTTCAGTAAAACTGATGAATGGATAGATAT  1319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CCACCACAGGATATGTTTGATTCCCCCAAGGAAAATGAAAAAGCCTTCAGTAAAACTGATGAATGGATAGATAT  1406

Query 1320  AAGTGTCTCTGACAGGAGTGAATGTACAAAACATACTTCTGGGAATAATTTGGTTTCACCAGATACAGACTACA  1393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  AAGTGTCTCTGACAGGAGTGAATGTACAAAACATACTTCTGGGAATAATTTGGTTTCACCAGATACAGACTACA  1480

Query 1394  GAGCTGGTTCTTCGTTTGAACTCTCTCCATCTGATAGCTCTGATGGAACATACATGTGGGATGAAGAAGGCTTG  1467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GAGCTGGTTCTTCGTTTGAACTCTCTCCATCTGATAGCTCTGATGGAACATACATGTGGGATGAAGAAGGCTTG  1554

Query 1468  GAACCCATTGGAAATGTCCATCCAGTTGGGAGCTATGAGTCCTCTGAAATGAACAGCATAG-TATGTATGGATT  1540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||
Sbjct 1555  GAACCCATTGGAAATGTCCATCCAGTTGGGAGCTATGAGTCCTCTGAAATGAACAGCATAGATAT-------TT  1621

Query 1541  TATATACTCTTGGAATATTTTGTTTACCCTACTATAGAGAGACTTG-TGA---TATGATTGATTT---------  1601
            |..|||.|||| ||||..|.||   |||      |.||| ||  || |||   ||||.|||||.|         
Sbjct 1622  TGAATAATCTT-GAATCATGTG---ACC------TTGAG-GA--TGATGATCTTATGCTTGATGTGGATCTGCC  1682

Query 1602  ------------TGTAAAAAATTTA-------------------------------------------------  1614
                        |.|..|||||.|.                                                 
Sbjct 1683  TGAGGATGCACCTCTTGAAAATGTGGAGTGTGACAATATGAACCGCTTTGACCGACCAGACAGAAATGTTCGGC  1756

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 1757  AGCCTCAGGAAGGTTTTTGGAAAAGGCCACCCCAGAGGTGGAGTGGACAGGAGCATTACCACCTCAGCCACCCT  1830

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 1831  GACCACTATCATCACCATGGAAAAAGTGACTTGAGCAGAGGCTCTCCCTATAGAGAATCTCCTTTGGGTCATTT  1904

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 1905  TGAAAGCTATGGAGGGATGCCCTTTTTCCAGGCTCAGAAGATGTTTGTTGATGTACCAGAAAATACAGTGATAC  1978

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 1979  TGGATGAGATGACCCTTCGGCACATGGTTCAGGATTGCACTGCTGTAAAAACTCAGTTACTCAAACTGAAACGT  2052

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 2053  CTCCTGCATCAGCATGATGGAAGTGGTTCATTGCATGATATTCAACTGTCATTGCCATCCAGTCCAGAACCAGA  2126

Query 1615  --------------------------------------------------------------------------  1614
                                                                                      
Sbjct 2127  AGATGGTGATAAAGTATATAAGAATGAAGATTTATTAAATGAAATAAAACAACTTAAAGACGAAATAAAGAAAA  2200

Query 1615  -----------------------------------------------------  1614
                                                                 
Sbjct 2201  AAGATGAAAAGATCCAACTATTAGAACTTCAGCTTAGACTGCACCAGTTGTCC  2253

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