Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12101
Subject:
XM_011513494.3
Aligned Length:
2950
Identities:
501
Gaps:
2447

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCGGCTGGGCTCCGGGACTTTCGCTACCTGTTGCGTAGCGATCGAGGTGCTAGGGATCGCGGTCTTCCTTCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGATTCTTCCCGGCTCCCGTTCGTTCCTCTGCCAGAGCGGAACACGGAGCGGAGCCCCCAGCGCCCGAACCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGGCTGGAGCCAGTTCTAACTGGACCACGCTGCCACCACCTCTCTTCAGTAAAGTTGTTATTGTTCTGATAGAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCTTGAGAGATGATTTTGTGTTTGGGTCAAAGGGTGTGAAATTTATGCCCTACACAACTTACCTTGTGGAAAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGGAGCATCTCACAGTTTTGTGGCTGAAGCAAAGCCACCTACAGTTACTATGCCTCGAATCAAGGCATTGATGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGGGGAGCCTTCCTGGCTTTGTCGACGTCATCAGGAACCTCAATTCTCCTGCACTGCTGGAAGACAGTGTGATA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGACAAGCAAAAGCAGCTGGAAAAAGAATAGTCTTTTATGGAGATGAAACCTGGGTTAAATTATTCCCAAAGCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTTTGTGGAATATGATGGAACAACCTCATTTTTCGTGTCAGATTACACAGAGGTGGATAATAATGTCACGAGGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATTTGGATAAAGTATTAAAAAGAGGAGATTGGGACATATTAATCCTCCACTACCTGGGGCTGGACCACATTGGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CACATTTCAGGGCCCAACAGCCCCCTGATTGGGCAGAAGCTGAGCGAGATGGACAGCGTGCTGATGAAGATCCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CACCTCACTGCAGTCGAAGGAGAGAGAGACGCCTTTACCCAATTTGCTGGTTCTTTGTGGTGACCATGGCATGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTGAAACAGGAAGTCACGGGGCCTCCTCCACCGAGGAGGTGAATACACCTCTGATTTTAATCAGTTCTGCGTTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAAAGGAAACCCGGTGATATCCGACATCCAAAGCACGTCCAACAGACGGATGTGGCTGCGACACTGGCGATAGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACTTGGCTTACCGATTCCAAAAGACAGTGTAGGGAGCCTCCTATTCCCAGTTGTGGAAGGAAGACCAATGAGAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGCAGTTGAGATTTTTACATTTGAATACAGTGCAGCTTAGTAAACTGTTGCAAGAGAATGTGCCGTCATATGAA  1110

Query    1  ---------------------------ATGTCAGAAAGATTGCATGGGAACTGGATCAGACTGTACTTGGAGGA  47
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AAAGATCCTGGGTTTGAGCAGTTTAAAATGTCAGAAAGATTGCATGGGAACTGGATCAGACTGTACTTGGAGGA  1184

Query   48  AAAGCATTCAGAAGTCCTATTCAACCTGGGCTCCAAGGTTCTCAGGCAGTACCTGGATGCTCTGAAGACGCTGA  121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AAAGCATTCAGAAGTCCTATTCAACCTGGGCTCCAAGGTTCTCAGGCAGTACCTGGATGCTCTGAAGACGCTGA  1258

Query  122  GCTTGTCCCTGAGTGCACAAGTGGCCCAGTACGACATCTATTCGATGATGGTGGGGACTGTCGTGGTTTTGGAG  195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GCTTGTCCCTGAGTGCACAAGTGGCCCAGTACGACATCTATTCGATGATGGTGGGGACTGTCGTGGTTTTGGAG  1332

Query  196  GTTCTCACCCTGCTCCTGCTCAGCGTCCCACAGGCACTGCGCAGAAAGGCTGAGCTGGAAGTCCCACTGTCATC  269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GTTCTCACCCTGCTCCTGCTCAGCGTCCCACAGGCACTGCGCAGAAAGGCTGAGCTGGAAGTCCCACTGTCATC  1406

Query  270  TCCTGGGTTTTCTCTGCTCTTTTATTTGGTGATCCTGGTTCTTTCGGCCGTTCACGTCATTGTGTGCACCTCAG  343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCCTGGGTTTTCTCTGCTCTTTTATTTGGTGATCCTGGTTCTTTCGGCCGTTCACGTCATTGTGTGCACCTCAG  1480

Query  344  CTGAAAGTTCGTGCTACTTCTGTGGCCTCTCGTGGCTGGCGGCAGGTGGGGTGATGGTGCTGGCCTCGGCGCTG  417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CTGAAAGTTCGTGCTACTTCTGTGGCCTCTCGTGGCTGGCGGCAGGTGGGGTGATGGTGCTGGCCTCGGCGCTG  1554

Query  418  CTGTGTGTGATTGTGTCTGTTCTGACCAACGTGCTCGTGGGTGGAAACACCCCAAGGAAGAACCCCATGCATCC  491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct 1555  CTGTGTGTGATTGTGTCTGTTCTGACCAACGTGCTCGTGGGTGGAAACACCCCAAGGAAG--------------  1614

Query  492  CAGCTCAAGGTGGTCAGAGCTAGACCTTCTTATTCTGTTGGGGACGGCGGGCCACGTCTTGAGCCTGGGCGCCA  565
              |||                                                         ||||        
Sbjct 1615  --GCT---------------------------------------------------------GCCT--------  1621

Query  566  GCAGCTTCGTGGAGGAGGAGCACCAGAC-CTGGTACTTCCTTGTGAACACCCTGTGTCTAGCTCTGAGCCAAGA  638
                 |||||         ..||||||| |||||                                        
Sbjct 1622  -----TTCGT---------TTACCAGACTCTGGT----------------------------------------  1641

Query  639  AACCTACAGAAACTACTTTCTGGGAGATGACGGTGAGCCTCCGTGTGGCCTCTGTGTGGAACAAGGGCATGACG  712
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query  713  GGGCCACAGCAGCGTGGCAGGACGGGCCTGGCTGTGATGTCCTGGAGCGAGACAAAGGCCACGGAAGCCCCTCT  786
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query  787  ACCTCCGAAGTGCTCAGAGGCCGCGAGAAGTGGATGGTGCTGGCCAGTCCGTGGCTAATACTGGCCTGCTGCCG  860
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query  861  GCTGCTGCGCTCCCTAAACCAGACAGGTGTGCAGTGGGCTCACCGGCCTGACCTCGGCCACTGGCTCACCAGCT  934
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query  935  CTGACCACAAAGCCGAGCTCTCTGTCCTGGCTGCCCTCTCCCTCCTCGTAGTTTTTGTGCTGGTGCAGAGGGGG  1008
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1009  TGCTCCCCTGTGTCCAAGGCTGCCCTGGCGCTGGGGCTGCTGGGCGTCTACTGCTACCGGGCGGCCATCGGGAG  1082
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1083  TGTCCGGTTCCCGTGGCGGCCGGACAGCAAGGACATTTCCAAGGGTATTATTGAAGCTCGTTTTGTTTATGTCT  1156
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1157  TTGTCCTTGGCATTCTGTTCACGGGCACCAAAGACTTACTTAAATCTCAAGTCATTGCTGCAGACTTCAAACTC  1230
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1231  AAGACTGTAGGTTTATGGGAGATATATAGTGGATTAGTTCTTCTGGCAGCCTTGCTCTTTAGACCACATAATCT  1304
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1305  TCCGGTCTTAGCATTTAGCCTCTTGATTCAGACTCTAATGACTAAATTCATCTGGAAGCCCCTGAGACACGATG  1378
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1379  CAGCTGAGATTACTGTGATGCATTATTGGTTTGGTCAAGCATTCTTCTATTTTCAGGGCAACTCCAACAACATT  1452
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1453  GCCACCGTGGACATCTCCGCAGGCTTCGTGGGCTTAGACACCTACGTGGAAATCCCAGCCGTGCTCCTGACAGC  1526
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1527  GTTTGGGACGTACGCAGGGCCTGTGCTGTGGGCCAGCCACTTAGTGCACTTCCTGAGCTCAGAAACACGCAGTG  1600
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1601  GTTCAGCACTGAGTCATGCTTGCTTCTGCTACGCACTGATTTGTTCTATTCCAGTTTTCACGTACATCGTTTTG  1674
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1675  GTGACATCTCTGCGTTATCATTTATTTATATGGAGTGTATTTTCTCCAAAACTTCTCTACGAGGGAATGCACCT  1748
                                                                                      
Sbjct 1642  --------------------------------------------------------------------------  1641

Query 1749  GCTCATTACAGCTGCTGTCTGTGTATTCTTCACGGCAATGGATCAAACCAGACTCACACAGTCT  1812
                                                                            
Sbjct 1642  ----------------------------------------------------------------  1641

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