Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12273
Subject:
NM_018351.4
Aligned Length:
4290
Identities:
1123
Gaps:
3162

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACTTCTGCAGCCGAGATAAAGAAGCCACCAGTGGCCCCCAAGCCCAAGTTTGTTGTGGCAAATAATAAGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCCCACCTCCTATTGCACCTAAACCCGACATTGTGATTTCTAGTGTTCCACAGTCGACAAAGAAAATGAAAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGCAATAGCCCCAAAACCAAAAGTCCTGAAGACCTCACCTGTTCGAGAGATTGGGCAGTCGCCATCAAGGAAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATCATGTTGAACCTGGAAGGGCATAAACAGGAATTAGCTGAAAGCACTGACAACTTTAATTGTAAATATGAAGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAATCAGAGCAATGATTATATTTCACCAATGTGTTCCTGCAGTTCTGAGTGTATCCATAAGCTGGGCCATAGAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AGAATTTGTGTGTAAAGCAGCTTGTTTTAGAGCCCCTGGAAATGAATGAAAATTTAGAAAACAGTAAAATTGAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAGACTTTGACTATAAAAACTAGGAGTAAATGTGATTTGTATGGTGAAAAAGCCAAGAACCAGGGTGGGGTTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTTAAAGGCAAGCGTTTTAGAAGAGGAGCTCAAAGATGCCTTAATACACCAAATGCCACCTTTTATTTCTGCAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGAAGCACAGGCCCACAGACAGCCCAGAAATGAATGGTGGCTGTAATTCAAATGGACAATTCAGAATTGAATTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCGGATTTGTCACCTTCCCCATCCAGCTTTGAAAAAGTTCCTGATCATCACAGTTGCCACTTACAGCTTCCTAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGATGAATGTGAACATTTTGAAACTTGCCAGGATGACAGTGAAAAAAGCAATAATTGCTTTCAGTCATCTGAAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TAGAGGCTCTGGAAAATGGGAAAAGGAGTACTTTAATATCTTCAGATGGAGTTAGTAAGAAATCAGAAGTCAAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GACCTTGGTCCCTTAGAAATTCATTTAGTACCATATACCCCAAAATTTCCAACTCCCAAGCCCAGAAAGACACG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AACTGCTCGTCTGTTACGCCAAAAGTGTGTAGATACTCCTAGTGAAAGCACTGAAGAACCGGGGAATTCAGACA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTAGCTCTTCCTGTCTTACTGAAAATAGTTTGAAAATCAATAAAATCAGTGTTCTGCATCAGAATGTTTTGTGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AAGCAGGAACAGGTGGATAAAATGAAGCTAGGAAATAAAAGTGAATTGAATATGGAATCCAACAGTGATGCACA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGACTTAGTCAATTCACAGAAAGCCATGTGTAATGAAACAACTTCCTTTGAAAAAATGGCACCTTCTTTTGATA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAGACTCTAATTTGAGTTCTGACAGCACAACTGTAGATGGTTCTAGTATGTCGCTTGCTGTGGACGAAGGGACC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGTTTTATAAGATGTACTGTATCTATGAGCCTGCCTAAGCAGCTCAAATTAACTTGCAATGAACATTTGCAATC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGGAGAAACCTGGGAGTTTCTGCCCCTCAAATGCAAAAGGAATCTGTTATAAAAGAGGAAAATTCTCTACGAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTGTCCCCAAAAAACCTCAAAGACATAGCTTGCCTGCTACAGGAGTGCTTAAAAAGGCTGCCTCCGAGGAGCTT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTGGAAAAAAGTTCTTATCCTTCAAGTGAAGAAAAAAGTTCAGAGAAGAGTCTAGAAAGAAATCACCTTCAGCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTTGTGTGCCCAAAACCGTGGTGTGTCATCCTCCTTTGATATGCCTAAACGGGCTTCAGAAAAGCCAGTGTGGA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGTTACCTCATCCTATTTTACCCTTTTCAGGGAACCCAGAATTCTTAAAGTCTGTCACCGTATCGTCAAACAGT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GAGCCTTCAACAGCCCTAACCAAGCCCAGAGCAAAATCGTTATCTGCTATGGATGTGGAAAAGTGCACTAAGCC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTGCAAAGACTCTACAAAGAAAAACTCTTTTAAAAAGTTGCTCAGCATGAAACTGTCCATCTGTTTCATGAAGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GTGACTTTCAAAAATTTTGGTCCAAGAGTAGCCAACTCGGAGACACCACCACAGGCCACCTCTCCAGTGGGGAG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CAGAAGGGGATTGAAAGTGATTGGCAAGGCTTGTTGGTAGGAGAGGAGAAGAGAAGTAAACCCATCAAGGCATA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTCCACAGAAAACTATAGCCTGGAATCTCAAAAGAAGAGGAAGAAGTCTCGGGGCCAGACCAGTGCAGCTAATG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GTCTGAGAGCTGAGTCTTTGGATGACCAAATGCTCTCCCGGGAGTCATCATCTCAGGCACCTTACAAGTCTGTT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  ACAAGCCTCTGTGCACCGGAGTATGAAAATATACGCCATTATGAGGAAATACCAGAGTACGAGAACTTGCCATT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TATTATGGCTATACGGAAAACTCAAGAGTTGGAATGGCAGAATTCCAGCAGCATGGAGGACGCTGATGCAAATG  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGTATGAGGTAGAAGAGCCGTATGAAGCTCCAGATGGCCAGCTGCAGCTTGGACCCAGACATCAGCATTCCAGT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TCAGGAGCATCCCAGGAGGAACAGAATGATCTTGGTCTTGGTGACCTTCCCTCTGATGAGGAGGAAATCATCAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CAGTTCTGATGAAGATGATGTCAGCTCTGAGTCAAGTAAAGGAGAGCCTGACCCACTGGAAGATAAACAGGATG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AAGATAATGGAATGAAAAGTAAAGTTCATCATATTGCCAAGGAGATCATGAGCTCAGAGAAAGTGTTTGTGGAT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GTGTTAAAACTTTTGCATATTGATTTCCGGGATGCAGTAGCTCATGCTTCCAGGCAACTTGGGAAACCAGTGAT  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TGAGGACCGGATTCTAAATCAGATCCTATACTACTTGCCTCAGCTGTATGAGCTCAACCGGGATCTCTTGAAGG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AACTGGAGGAAAGAATGTTGCACTGGACTGAACAACAAAGAATTGCTGATATCTTTGTAAAGAAGGGACCATAT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  CTAAAAATGTATTCCACATACATCAAAGAATTTGATAAGAATATAGCCTTGCTGGATGAACAGTGCAAGAAAAA  2960

Query    1  ----------------------------------ATGAGCCCTCGCTGTGCTAATCTGGCCCTCAAGCACTACC  40
                                              ||||||||||||||||||||||||||||||||||||||||
Sbjct 2961  TCCAGGTTTTGCTGCTGTTGTTAGAGAATTTGAGATGAGCCCTCGCTGTGCTAATCTGGCCCTCAAGCACTACC  3034

Query   41  TGCTCAAGCCGGTTCAGAGGATCCCCCAGTACAGGCTGTTGCTGACAGATTATTTGAAGAATCTCATAGAAGAT  114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035  TGCTCAAGCCGGTTCAGAGGATCCCCCAGTACAGGCTGTTGCTGACAGATTATTTGAAGAATCTCATAGAAGAT  3108

Query  115  GCTGGAGATTACAGAGACACTCAAGATGCCCTTGCTGTTGTTGTAGAGGTAGCCAACCACGCCAATGACACCAT  188
            ||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 3109  GCTGGAGATTACAGAGACACTCAAGATGCCCTTGCTGTTGTTATAGAGGTAGCCAACCACGCCAATGACACCAT  3182

Query  189  GAAGCAAGGAGACAACTTTCAGAAACTTATGCAAATTCAGTACAGCTTAAATGGACACCATGAAATTGTGCAGC  262
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183  GAAGCAAGGAGACAACTTTCAGAAACTTATGCAAATTCAGTACAGCTTAAATGGACACCATGAAATTGTGCAGC  3256

Query  263  CTGGTCGGGTTTTTCTCAAAGAAGGAATTCTGATGAAGCTGTCTCGGAAAGTGATGCAACCTCGAATGTTTTTC  336
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257  CTGGTCGGGTTTTTCTCAAAGAAGGAATTCTGATGAAGCTGTCTCGGAAAGTGATGCAACCTCGAATGTTTTTC  3330

Query  337  CTGTTTAATGATGCCCTGCTGTATACAACACCAGTGCAGTCTGGGATGTATAAACTGAACAACATGCTCTCACT  410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331  CTGTTTAATGATGCCCTGCTGTATACAACACCAGTGCAGTCTGGGATGTATAAACTGAACAACATGCTCTCACT  3404

Query  411  GGCTGGAATGAAGGTCAGAAAACCTACCCAAGAAGCCTATCAGAATGAATTAAAGATTGAAAGTGTAGAACGTT  484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405  GGCTGGAATGAAGGTCAGAAAACCTACCCAAGAAGCCTATCAGAATGAATTAAAGATTGAAAGTGTAGAACGTT  3478

Query  485  CCTTCATTCTCTCAGCCAGTTCTGCCACAGAAAGGGATGAATGGCTAGAAGCGATTTCCAGGGCAATAGAAGAG  558
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479  CCTTCATTCTCTCAGCCAGTTCTGCCACAGAAAGGGATGAATGGCTAGAAGCGATTTCCAGGGCAATAGAAGAG  3552

Query  559  TATGCCAAGAAAAGAATCACCTTCTGTCCTAGTAGGAGTCTTGATGAGGCAGACTCAGAAAATAAAGAAGAAGT  632
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553  TATGCCAAGAAAAGAATCACCTTCTGTCCTAGTAGGAGTCTTGATGAGGCAGACTCAGAAAATAAAGAAGAAGT  3626

Query  633  TAGTCCTCTTGGATCGAAGGCTCCCATCTGGATTCCTGATACCAGAGCCACAATGTGTATGATCTGCACAAGCG  706
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627  TAGTCCTCTTGGATCGAAGGCTCCCATCTGGATTCCTGATACCAGAGCCACAATGTGTATGATCTGCACAAGCG  3700

Query  707  AATTCACTCTCACCTGGAGACGACACCACTGCCGGGCCTGTGGAAAGATTGTATGCCAAGCTTGTTCGTCTAAT  780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701  AATTCACTCTCACCTGGAGACGACACCACTGCCGGGCCTGTGGAAAGATTGTATGCCAAGCTTGTTCGTCTAAT  3774

Query  781  AAGTATGGCTTAGATTACCTGAAAAATCAACCAGCAAGAGTATGTGAACATTGTTTCCAAGAACTGCAGAAATT  854
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775  AAGTATGGCTTAGATTACCTGAAAAATCAACCAGCAAGAGTATGTGAACATTGTTTCCAAGAACTGCAGAAATT  3848

Query  855  AGATCACCAGCACTCCCCTAGGATTGGATCTCCTGGAAATCACAAATCTCCTTCAAGTGCCTTATCATCAGTCT  928
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849  AGATCACCAGCACTCCCCTAGGATTGGATCTCCTGGAAATCACAAATCTCCTTCAAGTGCCTTATCATCAGTCT  3922

Query  929  TACATAGCATTCCATCAGGGAGGAAACAGAAAAAAATCCCAGCTGCTCTCAAAGAAGTATCAGCAAACACAGAG  1002
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923  TACATAGCATTCCATCAGGGAGGAAACAGAAAAAAATCCCAGCTGCTCTCAAAGAAGTATCAGCAAACACAGAG  3996

Query 1003  GATTCTTCTATGAGTGGCTACTTGTACAGATCAAAGGGCAATAAAAAACCCTGGAAACACTTTTGGTTTGTCAT  1076
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997  GATTCTTCTATGAGTGGCTACTTGTACAGATCAAAGGGCAATAAAAAACCCTGGAAACACTTTTGGTTTGTCAT  4070

Query 1077  AAAAAATAAAGTACTATATACATATGCTGCAAGTGAGG------------------------------TAAGAT  1120
            ||||||||||||||||||||||||||||||||||||||                              ||.|||
Sbjct 4071  AAAAAATAAAGTACTATATACATATGCTGCAAGTGAGGACGTGGCCGCTTTGGAGAGTCAGCCTTTATTAGGAT  4144

Query 1121  ---CTGAAATC---------------------------------------------------------------  1128
               |||..||.                                                               
Sbjct 4145  TCACTGTTATTCAAGTTAAAGATGAGAATTCCGAGTCTAAAGTATTTCAGTTACTGCACAAAAACATGTTATTT  4218

Query 1129  ------------------------------------------------------------------------  1128
                                                                                    
Sbjct 4219  TATGTATTCAAAGCAGAGGATGCTCATTCGGCTCAGAAGTGGATAGAAGCATTTCAGGAAGGCACAATATTG  4290

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