Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12622
Subject:
NM_026231.2
Aligned Length:
1919
Identities:
1612
Gaps:
40

Alignment

Query    1  ATGAAAGCCATAAAGAAAAGTCTTACAGAAGAAGAATACCTGTACCTGGACTTTTCTCACCAAACAGAAGGATG  74
            |||||||.|||.||||||||||.|||   .||.||||..|||||||||||.|..|||||||||||||||||.||
Sbjct    1  ATGAAAGGCATTAAGAAAAGTCCTAC---GGAGGAATCTCTGTACCTGGAGTACTCTCACCAAACAGAAGGCTG  71

Query   75  CATCTTTCCTCTTCATACATCTGTAACTTTATTTCTGTTATCTTACTGTGACTGTAAAATCTTTAAAATTTGCT  148
            ||||||||||||.||.||.|||||||||||.|||.|..||||.||||||||.||.||..|||||||..||||||
Sbjct   72  CATCTTTCCTCTCCACACGTCTGTAACTTTGTTTTTACTATCATACTGTGAATGCAAGGTCTTTAACGTTTGCT  145

Query  149  TAGTTGTCACCAAAGAGGTGAGTAGAGATAGTTCA---------CTACTAAGAGATGACCTGATCCAGGATGTT  213
            ||||..||||..||||   .||||.|||||.||||         .|.||||.|||.|..|||..||||||..|.
Sbjct  146  TAGTCCTCACTGAAGA---AAGTACAGATACTTCAGACACTTCGTTCCTAAAAGAGGCACTGCCCCAGGACCTG  216

Query  214  GAAATACAGATTATTTCAAGGCAGGAGCTCCCACCAATAGTCCAAAATTGCTGTTTGCCTGCAGTAGTAGAACG  287
            |||||||||.|||||||||.|||||.||||||.||.||.|||||.||||||||||||||||||||.|||||.|.
Sbjct  217  GAAATACAGGTTATTTCAAAGCAGGCGCTCCCTCCGATTGTCCAGAATTGCTGTTTGCCTGCAGTGGTAGATCA  290

Query  288  ATCAGACAATTTTTGTAGAGCAGGACTTGCTGTTGTATTGAGACACATAATCCAGAAATCCTATGAAGCAGACC  361
            |.|.|||..|||.|||||.|||||.|||||||||||..||||||||||||||||.||||||||||||||.||.|
Sbjct  291  ACCTGACGTTTTCTGTAGGGCAGGCCTTGCTGTTGTCCTGAGACACATAATCCAAAAATCCTATGAAGCTGAGC  364

Query  362  CCTTAAAGAAGGAACTTTTGGAACTTCTGGGCTTTAAAAAGACTTGCTTGAAAGCCTGTGCTGAAGTTAGTCAG  435
            |||.||..||||||.||||||||||||||||.||||||||||||||.||||||||.||||||||||||||||||
Sbjct  365  CCTCAAGAAAGGAAATTTTGGAACTTCTGGGTTTTAAAAAGACTTGTTTGAAAGCTTGTGCTGAAGTTAGTCAG  438

Query  436  TGGACCAGGCTATGTGAACTCACCATCCCTTTGGCTATTGAGAATTTTCTCAGAGAATCTTCTGACCAGCCCCC  509
            ||||||||||||||||||||||||||||||||||||.||||||||||||||..|||.||.|||||.||.|||||
Sbjct  439  TGGACCAGGCTATGTGAACTCACCATCCCTTTGGCTGTTGAGAATTTTCTCCAAGAGTCCTCTGAGCATCCCCC  512

Query  510  AACTATACCTGTAGAAATACTACAGCTAGAGAAAAAGCTTAGTGAGCCTGTTAGAGTGCATAATGATGATAAAC  583
            ||||||.||||.||||||.|||.||||.||||..|||||.|||||||||||.|||||.||.||||||||.||||
Sbjct  513  AACTATCCCTGAAGAAATCCTAGAGCTCGAGAGGAAGCTCAGTGAGCCTGTCAGAGTACACAATGATGACAAAC  586

Query  584  TCCGCAGGCAGAAGCTCAAGCAACAGAAGGCTGATGG-AGTTGGGCCTCCCCTTAC--TAAGGGAAAGGCAAAG  654
            ||||.||.||||||||.||||||||||||||||.||| || ||.|||||||  |.|  .|||||.||.||||||
Sbjct  587  TCCGAAGACAGAAGCTGAAGCAACAGAAGGCTGCTGGCAG-TGAGCCTCCC--TCCGGGAAGGGGAAAGCAAAG  657

Query  655  AGCAAGGTCCACA----CACAGGAAACATCTGAAGGGTTGGATTCTTCATCCAAGAGTCTGGAACTGAAAGTGG  724
            |||||||    ||    |||||.|.|||.|..|||..||||.|.||.|.||||||||||||||||||||.||||
Sbjct  658  AGCAAGG----CAAGTGCACAGAAGACACCCAAAGACTTGGCTGCTCCCTCCAAGAGTCTGGAACTGAAGGTGG  727

Query  725  CATTCTCAAAGCTCACAGTACAGGAAGAACCAGCTACTACCAACAGAGAGCCTTCTCACATCAGAAAAGCAAAA  798
            |.|||||||||||||||||.||.|||||..|||||.|||.||||||.|||||||||||||||||.|||||||||
Sbjct  728  CGTTCTCAAAGCTCACAGTGCAAGAAGATGCAGCTGCTAGCAACAGGGAGCCTTCTCACATCAGGAAAGCAAAA  801

Query  799  GCCTCCGACCTTCCACCTCTGGAGCATGTGTTTGCAGAAGGGCTTTACTTCACTCTGGCAGATATTGTGCTCTT  872
            |||.|||||||.||.|||||||||||.||||||||||||||.||.|||||||||.|||||||.||.|||||.||
Sbjct  802  GCCGCCGACCTCCCGCCTCTGGAGCACGTGTTTGCAGAAGGACTGTACTTCACTTTGGCAGACATCGTGCTTTT  875

Query  873  GCCCTGTATCCATCATTTCTTGGTAATTATCAGCAGGAAATTTTCTGAGAAGCTGGTAGAATTTCCATTGCTAG  946
            |||||||||.||.||.||.||||||||||||.|||.|||||||||.||||||||||.|.|.||||||.|.|||.
Sbjct  876  GCCCTGTATTCACCACTTTTTGGTAATTATCTGCAAGAAATTTTCAGAGAAGCTGGAACAGTTTCCACTACTAA  949

Query  947  CCTCTTGGTACCAGAGGATTCAGGAAGTGCCAGGAGTAAAAA---CAGCTTCTAAGTGTGGGATCCAATTTCTC  1017
            ||||||||||.|||||||||||||||||||||..|||.||||   |||||||.||||||||||||.|.|||||.
Sbjct  950  CCTCTTGGTATCAGAGGATTCAGGAAGTGCCAAAAGTCAAAACAGCAGCTTCCAAGTGTGGGATCTACTTTCTG  1023

Query 1018  CATTTACCAAAGTTGTTGACAAC-CT-CAACTGAACAGCATCCAAACTTATG-TGAAGTCCCAGGTGTAGAAGA  1088
            .||||||||.|.|||.||  ||| || |||...||||||.|...|| ||.|| ||||||..|||.||||||.||
Sbjct 1024  TATTTACCAGAATTGCTG--AACTCTGCAAGGAAACAGCCTGTGAA-TTCTGATGAAGTAGCAGCTGTAGATGA  1094

Query 1089  GCAAAGCGATCCTTTATTTATAGGAGGACCAAGACCAACCATGGCCAAGTTAATGGAAAAGGGCATTGAAGTGA  1162
            ||||||.||.||||||||||||||||||||||||||.||.|||.|||||||.||||||||.||||||||||..|
Sbjct 1095  GCAAAGTGACCCTTTATTTATAGGAGGACCAAGACCGACTATGACCAAGTTGATGGAAAAAGGCATTGAAGCCA  1168

Query 1163  TGTTTTCTCCCCACCCTTGCCCTACTTGGACTCTTGATTGGAATGTTCTCCCTGCAGCAGTCAGCCCAAAGGAA  1236
            ||||||||||.||||||||.|||.|||||||.|||||.||||....|||.|||||.||.||||||||.||||||
Sbjct 1169  TGTTTTCTCCGCACCCTTGTCCTGCTTGGACCCTTGACTGGAGCAGTCTTCCTGCTGCCGTCAGCCCGAAGGAA  1242

Query 1237  GGTAAAATGTCCAGTGATCGAGCTTTGAGGAAGCAGCAACAGTTGAACAACCTTGTCTATGTGGTAACAAATCA  1310
            |||||||||||||.|||.||||||.|||||||.|||||.|||||.||||||||||||||..||||....|||||
Sbjct 1243  GGTAAAATGTCCACTGACCGAGCTCTGAGGAAACAGCAGCAGTTAAACAACCTTGTCTACCTGGTGCTGAATCA  1316

Query 1311  GGCCAAACCTGGTGACAGAATTGTGGATTTCTGCAGCGGTGGGGGCCATGTTGGAATTGTCCTTGCTCACATGC  1384
            .|||||||||||.|||||||||||||||||||||||.||.||||||||||||||||||||||||||.|||||||
Sbjct 1317  AGCCAAACCTGGGGACAGAATTGTGGATTTCTGCAGTGGCGGGGGCCATGTTGGAATTGTCCTTGCCCACATGC  1390

Query 1385  TGCCATCATGTCAGGTTACATTAATAGAAAACAAGGAATTATCATTAATTCGTGCTAAGAAGAGAAGTGATGAA  1458
            ||||.||.||.||||||||.||||||||.||||||||||||||||||||.||||||||||||||||||||.|||
Sbjct 1391  TGCCCTCGTGCCAGGTTACGTTAATAGAGAACAAGGAATTATCATTAATCCGTGCTAAGAAGAGAAGTGACGAA  1464

Query 1459  CTGGGTTTAAGCAACATTTGGTTCATTCAAGCAAATATGGAATATTTTACTGGGATGTTTAATATTGGAGTAGC  1532
            ||.|||||||||||.||||||||||||||||||||||||||.|||||.||.||.||||||||.|||||.||.||
Sbjct 1465  CTTGGTTTAAGCAATATTTGGTTCATTCAAGCAAATATGGAGTATTTCACAGGAATGTTTAACATTGGGGTGGC  1538

Query 1533  ATTGCATGCTTGTGGAGTGGCAACAGACATGGTGATTGAGCACTGTATCAAAACACGGGCTTCCTTCGTCACAT  1606
            .|||||.|||||||||||||||||||||||||||||.||||||||.|||.|||||||||||||||||.||||||
Sbjct 1539  CTTGCACGCTTGTGGAGTGGCAACAGACATGGTGATCGAGCACTGCATCCAAACACGGGCTTCCTTCATCACAT  1612

Query 1607  GCCCTTGCTGTTATGGTTTCATTCAGAACACCTCAAAGTTCAATTTTCCAAAAAGTGAACAATTCAAGAAAACT  1680
            ||||.||||||||.||.||||||||||||||.||.|||||.||.||.||||||||||||.||||||||||||||
Sbjct 1613  GCCCCTGCTGTTACGGGTTCATTCAGAACACATCCAAGTTTAACTTCCCAAAAAGTGAAAAATTCAAGAAAACT  1686

Query 1681  TTATCATACAAGGAACACATGATTCTGTGCAGATTTGCAGACCAGACAGCTGTCCAGCTCCCACCCCAACGAAG  1754
            |||||||||||||||||||||.|.||.|||||||||||.||.||||||||||||||||||||||||.|..|.||
Sbjct 1687  TTATCATACAAGGAACACATGCTCCTCTGCAGATTTGCCGATCAGACAGCTGTCCAGCTCCCACCCGAGAGGAG  1760

Query 1755  GCTCATAGGAAAACAGTGCATGTGCTTGGTGGATCTGGATCGAGCAAGAGCTGCAGAAGAATGTGGATACTCCG  1828
            .||||||||.||.|||||||||.||.|||||||||||||.||||||..|||.||||.||||...||.|||||.|
Sbjct 1761  ACTCATAGGGAAGCAGTGCATGGGCCTGGTGGATCTGGACCGAGCAGCAGCAGCAGGAGAACACGGCTACTCTG  1834

Query 1829  TTCAAGTGATATCCATGGAGCCAGAGAGCTGCTCTCCCAAAAATAACATGATTGTGGGAGTCCCCATT-  1896
            ||||||||||.||.||||||||||||||||||||||||||.||.||||||||||||||.|||||| || 
Sbjct 1835  TTCAAGTGATCTCTATGGAGCCAGAGAGCTGCTCTCCCAAGAACAACATGATTGTGGGTGTCCCC-TTG  1902

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