Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12708
Subject:
XM_011248527.2
Aligned Length:
2142
Identities:
1679
Gaps:
285

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAATCCATCCTTGGCTCTAAGCGCAGAGTCTGCATGGAGTCAGAAGCCGCCACCTATTGGTACATCTATGAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGACCTTCTTGTGGACAAATACCTGATCAGAAGCAACTTACAGAGGCCGTCTGGGTACATGGAAAACTCGGTCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCTACAGCGCCATTGAAGACGTTCAGCCGCTGTCCTGGGAGAACGCCCCGAAGTACTGTTTACAGCTCACGATC  222

Query    1  ----------------------------------------------ATGGCAAGTGTTGCC-------------  15
                                                          ||   .||||.|.||             
Sbjct  223  CCCGGAGGGACCGTCCTGCTGCAGGCTGCCAACAGCTACCTGCGAGAT---CAGTGGTTCCATTCTCTGCAGTG  293

Query   16  -CAGAAAAAGATTTACAAATATAAGAAAGTGCTGAGTAACCCAAGCCGCTGGGAAGTTGTCTTGAAAGAGATCC  88
             .|||||||||||||||||||.||||||||.|||||||||||||||||||||||.|||||||||||.|||||.|
Sbjct  294  GAAGAAAAAGATTTACAAATACAAGAAAGTCCTGAGTAACCCAAGCCGCTGGGAGGTTGTCTTGAAGGAGATAC  367

Query   89  GGACCCTGGTGGACATGGCCCTGACATCCCCCCTGCAGGATGACTCCATCAACCAGGCCCCACTGGAAATCGTC  162
            ||||.|||||||||||||||||.||.||.||.|||||||||||.||.|||||||||||.||.||||||||||||
Sbjct  368  GGACGCTGGTGGACATGGCCCTCACGTCGCCTCTGCAGGATGATTCTATCAACCAGGCTCCGCTGGAAATCGTC  441

Query  163  TCGAAACTGCTCTCAGAGAACACAAACTTGACCACCCAGGAGCATGAAAACATCATTGTGGCAATCGCTCCTTT  236
            ||.||||||||||||||||||||||||.|||||||.||||||||.||.|||||||||||||||||.||.|||.|
Sbjct  442  TCAAAACTGCTCTCAGAGAACACAAACCTGACCACTCAGGAGCACGAGAACATCATTGTGGCAATTGCGCCTCT  515

Query  237  GCTGGAAAACAACCACCCACCACCAGATCTCTGTGAATTCTTTTGCAAGCACTGCAGAGAGCGGCCCCGGTCCA  310
            |||.|||||||||||||||||.|||||.|||||.||||||||.|||||||||||||||||||||||||||||.|
Sbjct  516  GCTAGAAAACAACCACCCACCCCCAGACCTCTGCGAATTCTTCTGCAAGCACTGCAGAGAGCGGCCCCGGTCTA  589

Query  311  TGGTGGTCATCGAGGTGTTCACCCCCGTGGTGCAGCGAATCCTCAAGCATAACATGGACTTTGGGAAGTGCCCG  384
            ||||||||||||||||||||||.||.|||||.|||.|.|||||.||.|||||.||||||||||||||||||||.
Sbjct  590  TGGTGGTCATCGAGGTGTTCACACCAGTGGTTCAGAGGATCCTTAAACATAATATGGACTTTGGGAAGTGCCCA  663

Query  385  CGACTGAGGCTGTTTACTCAGGAGTACATCCTTGCCTTGAACGAGCTCAACGCGGGGATGGAAGTGGTGAAGAA  458
            .|.||||||||.||.||.||||||||.||.||||||.||||||||||||||||.||.|||||.|||||.|||||
Sbjct  664  AGGCTGAGGCTCTTCACCCAGGAGTATATTCTTGCCCTGAACGAGCTCAACGCAGGCATGGAGGTGGTAAAGAA  737

Query  459  GTTCATTCAGAGCATGCACGGCCCCACAGGGCACTGCCCCCACCCCCGGGTCCTGCCCAACCTGGTGGCCGTGT  532
            ||||||.||.||||||||.||||||||||||||||||||.||.|||||||||||||||||.||.|||||.||||
Sbjct  738  GTTCATACAAAGCATGCATGGCCCCACAGGGCACTGCCCACATCCCCGGGTCCTGCCCAATCTCGTGGCTGTGT  811

Query  533  GCCTGGCTGCCATCTACTCCTGCTATGAAGAGTTCATCAACAGCCGCGACAATTCCCCAAGCCTGAAGGAAATC  606
            |||||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||.||||||||.||.|||
Sbjct  812  GCCTGGCTGCCATATACTCCTGCTATGAAGAGTTCATCAACAGTCGCGACAACTCCCCCAGCCTGAAAGAGATC  885

Query  607  CGGAACGGCTGCCAGCAGCCGTGCGACCGGAAGCCCACTTTACCTCTGCGCCTTCTGCACCCCAGCCCGGACCT  680
            ||.|||||||||||||||||.||||||||.||||||||.|||||||||||.||.||||||||||||||||||||
Sbjct  886  CGAAACGGCTGCCAGCAGCCATGCGACCGAAAGCCCACCTTACCTCTGCGTCTGCTGCACCCCAGCCCGGACCT  959

Query  681  GGTGTCTCAGGAAGCCACGCTGTCTGAGGCCCGGCTCAAGTCGGTGGTCGTGGCCTCCAGTGAGATCCACGTGG  754
            ||||||||||||||||||..||||||||.|.|||||.|||||||||||.|||||||||||.|||.|||||||||
Sbjct  960  GGTGTCTCAGGAAGCCACATTGTCTGAGCCACGGCTGAAGTCGGTGGTTGTGGCCTCCAGCGAGGTCCACGTGG  1033

Query  755  AGGTGGAACGCACCAGCACTGCCAAGCCGGCGCTGACGGCCAGCGCAGGCAACGACAGCGAGCCCAACCTCATC  828
            |||||||.|||||||||||||||||||||||||||||.||||||.|.|||||||||||||||||||||||.||.
Sbjct 1034  AGGTGGAGCGCACCAGCACTGCCAAGCCGGCGCTGACCGCCAGCACGGGCAACGACAGCGAGCCCAACCTTATT  1107

Query  829  GACTGCCTCATGGTCAGCCCCGCCTGCAGCACCATGAGCATCGAGCTGGGCCCCCAGGCCGACCGCACGCTCGG  902
            |||||.||.|||||||||||.|||||..|.|||||||||||||||||||||||||||||||.||||||||||||
Sbjct 1108  GACTGTCTGATGGTCAGCCCAGCCTGTGGGACCATGAGCATCGAGCTGGGCCCCCAGGCCGGCCGCACGCTCGG  1181

Query  903  CTGCTACGTGGAAATCCTCAAGCTGCTGTCAGACTATGATGACTGGAGACCGTCTCTGGCCAGTTTGCTTCAAC  976
            .|||.|||||||.|||||||||||||||||.|||||.||||||||||||||||||||||||||.||||||||||
Sbjct 1182  TTGCCACGTGGAGATCCTCAAGCTGCTGTCCGACTACGATGACTGGAGACCGTCTCTGGCCAGCTTGCTTCAAC  1255

Query  977  CCATTCCATTCCCCAAAGAAGCTCTCGCACATGAGAAGTTCACCAAGGAACTGAAGTACGTGATTCAGAGGTTC  1050
            ||||||||||||||||||||||||||||.||.|||||||||||.|||||||||||||||||||||||||||||.
Sbjct 1256  CCATTCCATTCCCCAAAGAAGCTCTCGCCCACGAGAAGTTCACAAAGGAACTGAAGTACGTGATTCAGAGGTTT  1329

Query 1051  GCCGAAGACCCCAGGCAAGAGGTCCACTCATGCCTGCTGAGCGTGCGGGCCGGCAAAGATGGCTGGTTCCAGCT  1124
            ||.|||||.||.||.||.||.||||||||.||.|||||||||||||||||.|||||.|||||||||||||||||
Sbjct 1330  GCAGAAGATCCAAGACAGGAAGTCCACTCCTGTCTGCTGAGCGTGCGGGCAGGCAAGGATGGCTGGTTCCAGCT  1403

Query 1125  CTACAGCCCCGGAGGGGTGGCCTGCGACGATGACGGGGAGCTGTTCGCCAGCATGGTGCACATCCTCATGGGCT  1198
            |||||||||.||||||||||||||.||.|||||||||||||||||.|||||||||||||||||.||||||||||
Sbjct 1404  CTACAGCCCTGGAGGGGTGGCCTGTGATGATGACGGGGAGCTGTTTGCCAGCATGGTGCACATTCTCATGGGCT  1477

Query 1199  CCTGTTACAAGACCAAAAAATTCCTGCTCTCCCTGGCAGAAAACAAGCTGGGTCCCTGCATGCTCCTGGCACTG  1272
            |||||||||||||||||||.||.||||||||.||||||||||||||||||||.|||||.|||||||||||.|||
Sbjct 1478  CCTGTTACAAGACCAAAAAGTTTCTGCTCTCACTGGCAGAAAACAAGCTGGGCCCCTGTATGCTCCTGGCCCTG  1551

Query 1273  AGGGGGAACCAGACCATGGTGGAGATCCTGTGCTTGATGCTGGAATACAACATCATCGACAACAACGACACCCA  1346
            ||.||||||||||||||||..|||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1552  AGAGGGAACCAGACCATGGCAGAGATCCTGTGTTTGATGCTGGAATACAACATCATCGACAACAACGACACCCA  1625

Query 1347  ACTGCAGATCATCTCAACCCTGGAGAGCACAGACGTGGGGAAGCGCATGTACGAGCAGCTGTGTGACCGGCAGC  1420
            |||||||||||||||.||.|||||||||||.||||||||.|||||||||||.||.||||||||.||||||||||
Sbjct 1626  ACTGCAGATCATCTCCACGCTGGAGAGCACGGACGTGGGCAAGCGCATGTATGAACAGCTGTGCGACCGGCAGC  1699

Query 1421  GGGAGCTGAAGGAGCTGCAAAGGAAAGGCGGGCCCACCAGGCTAACACTGCCCTCCAAGTCCACAGACGCTGAC  1494
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||.||.|||
Sbjct 1700  GGGAGCTGAAGGAGCTGCAAAGGAAAGGCGGACCCACCAGGCTAACACTGCCCTCCAAGTCCACGGATGCGGAC  1773

Query 1495  TTGGCTCGTTTGCTGAGCTCCGGCTCCTTCGGAAACCTGGAGAACCTCAGTTTGGCCTTCACCAATGTAACCAG  1568
            .||||.||..||||||||||.||||||||.||||||||||||||||||||.||||||||||||||.||.|||||
Sbjct 1774  CTGGCCCGCCTGCTGAGCTCTGGCTCCTTTGGAAACCTGGAGAACCTCAGCTTGGCCTTCACCAACGTCACCAG  1847

Query 1569  TGCCTGCGCCGAGCACCTCATCAAACTGCCTTCGCTCAAGCAGCTGAACCTGTGGTCCACTCAGTTTGGAGACG  1642
            |||||||||||||||||||||||||||||||||.|||||||||||.||.|||||||||||.|||||||||||||
Sbjct 1848  TGCCTGCGCCGAGCACCTCATCAAACTGCCTTCCCTCAAGCAGCTCAATCTGTGGTCCACGCAGTTTGGAGACG  1921

Query 1643  CTGGCCTTCGGCTCCTGTCGGAACACCTCACCATGCTCCAGGTGCTGAACCTGTGCGAGACCCCGGTCACAGAC  1716
            |.|||||.||||||||.|||||.||||||||.||||||||.||||||||||||||.||||||||.|||||.|||
Sbjct 1922  CCGGCCTGCGGCTCCTTTCGGAGCACCTCACTATGCTCCAAGTGCTGAACCTGTGTGAGACCCCAGTCACCGAC  1995

Query 1717  GCTGGCCTGCTGGCCCTGAGCTCCATGAAGAGTCTCTGCAGTTTAAACATGAACAGCACCAAGCTCTCAGCTGA  1790
            ||.|||.||||||||||.|||||||||||||||||.|||||||||||.||||||||||||||||||||.|||||
Sbjct 1996  GCGGGCTTGCTGGCCCTCAGCTCCATGAAGAGTCTTTGCAGTTTAAATATGAACAGCACCAAGCTCTCGGCTGA  2069

Query 1791  CACCTACGAAGATCTGAAGGCCAAGCTTCCCAATTTGAAGGAAGTGGACGTCCGCTACACCGAAGCCTGG  1860
            |||||||||.||||||||||||||||||||.||..|.|||||.||.||.||.||||||||.|||||||||
Sbjct 2070  CACCTACGAGGATCTGAAGGCCAAGCTTCCTAACCTAAAGGAGGTTGATGTTCGCTACACGGAAGCCTGG  2139

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