Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12746
Subject:
NR_104286.2
Aligned Length:
3201
Identities:
246
Gaps:
2955

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCACTCCGCCTGCCGGCTGGGAAACTAGGGCACCAGTACGATAGTTCCGGCACCGGAAAAGAGGGCTGATGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGGCCCGGGGGCCGCCGCAACGACCCTTGGGGCCGGCAAAGAGCCAGAGAGGGTGCTCACACTTCCAAGCACC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCACACCAAGGACAGGCTGGACGGCAAGGCGGAGACGCGGGGCTTGGGCCCTCAGACCGGGGACAGCAGGAGGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGGCCAAGGGCCAGGACTTCCCGTCACAATTTCATTTGTTGATCCCGGCACCGCCAGGTACCTGGGCCAGCTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GACGACAGTGAGTTTGAGAGAGCCCTGCAGAAGCTGCAGCTGACCAGGAGCATCTGGACCATCGACCTGGCCTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCTGATGCACCACTTTGGCGTGAGGCACCGCTTCTGTACCCAGACCCTGGGTGTCGACAAGGGCTACAAGAACC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGTCCTTCTACAGGAAGCACTTTGACACAGAAGAGACCCGGGTGAATCAGCTGTTTGCACAAGCAAAGGCCTGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AAGGTGCTGGTGGAGAAATGCAGGAATGTGCAGCACCAGCATCAGTAACTTTGAGGAGGCCAGAACCAGCTATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCACAGATGAGGACATCCTCTTTGTCTACTTGGACAGCTGACAGCAGGAGCCTGGTGCGCCTAGGCCCTCGGAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCCATCCCCACCCCAGCCGGGCCCGCTCAGGATGCCCTGGCCCAGGCTTGGGGCTGCTGGGGTTGGAATGTGGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACTGCAGCCTCAGCCCATCTGGCAGAGTCCCAGGAACTCGGAGACTGGCACAGCTGCTTTGTCTGCCAGTGCCG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGTGTTGTCATGTCACTCACCCCAAGCACCTGCTGGCTGCTGGAAGCATACCCCAAGACCCCAAGCCTTGACTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CAGCTGCGCCCACAGGAAGTCCAGTCCCGACAGTGCCCTTGTTGCCTTTGAGCCAGATCCATGGCAATGGTCTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCCACAGACCGCAGGACTGAGCCTGGAGAGAGAAGTTGCTTGACGGATGCCACTTGTCAGGACAGTATGTGAGT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTCTGGAGACAGCATAGCTGACCCCAATCCCCCAGGGCTGAGGACCCCTCCAGGCCCCTCTCTCCTGGAAGTGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGCATATGCCCCTGTGCCCAGTGGTTGATGATACCACCACCACCTGCCTACCCATGGGCCCAAGTTTCTGTGGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCATTACAGGGCATCTGACCCCTGCCACCCAGCATAGACACACCTCACAGCTGCCCTGCCATGCAGAGCCCTGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCGCTGGAGACTCTTAAAGCCCCCACAGCCCTCCAGGTCCTCCAGCTCTGTCAGATGGAGGGCTCTCGGGCCTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GATCCCACTGGTAGGCCTCGTGGCTGGCAGCAGTGCTCTGGGAATAAACAGCTGCCCTAGCCCCAGAGGGATCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTGCACCCAGGAGGCCTCCTGACACCAGCCAAAATCCTGACAGCAGGGTCTGCCCTCTTGAGTGTGGGGAGCCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTAGTCCTTTAAGGTTGGCTGCTAAGGCCTGTGCTCCAAAGCAACGGGCTGGGGCAGCCTGCAGCTGCCCACCC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AACCTGGTCTTCACACCAGATTGCACAGGATACTGGGTCTTGTCTATCTTGATGGAGAAGAGGGGTTCCTGCCC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGGATCTTACAACACAGCAAGTAGCATAGAGCTCTTTCCTTCCTCTTTTTTGGGGAGGTTGGGGTCAGGGGTTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTTCTTTGAGATTTAAGTTTTCATTTTTGAGGGGTAATCACCTTCAAGTAAAACAGTAATAGCAAGAGTGAAGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TACTTTGGAACCACTAACACCTCTGCACAGGGCAGTTAGCCAGCTCAAGTTCTTTTTCAGAGAAAGGGACTTGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCAGTGGTTTAAGTACCTGCCCCTTCACCTCTCAGACGAGGCAGCTGACGAGGCAGCTGGCCCAGTCTTGGGAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TCTGCTCAGGACAGTGGTGGAGCTGGGTCTTGAACCCCAGTCTGCACCTAAAAAACTAAAGGAAATGGATTTTT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TTTTTTTTTTTTGAGACGGAGACTCACTCTGTTGCCCAGACTGGAGTGCAGTGGCACGATCTTGGCTTACTACA  2072

Query    1  ------------------------------------------------------------------ATGCCACC  8
                                                                              ||||||||
Sbjct 2073  ACCTCCGCCTCCTGGGTTCAAGCGATCCTCCTGCCTCAGCCCCCCACTAGCTGGGACTACAGGCACATGCCACC  2146

Query    9  ATGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACCAGGCTTCGCCATGTTGGCCAGGCTGGTCTCGAACCCC  82
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  ATGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACCAGGCTTCGCCATGTTGGCCAGGCTGGTCTCGAACCCC  2220

Query   83  TGAGCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTGGGAAATGGGTCATTTTCAAAGGGGCAACAGTGATA  156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  TGAGCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTGGGAAATGGGTCATTTTCAAAGGGGCAACAGTGATA  2294

Query  157  CCATCCCTGCACTCCTGGGTCCTGCTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCAT  230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  CCATCCCTGCACTCCTGGGTCCTGCTCTTCCAATGCCCAAGGCATGGCATGGTGGCAGCTGTGCCCCCGCCCAT  2368

Query  231  TGCTTTGGAGCACAGA----------------------------------------------------------  246
            ||||||||||||||||                                                          
Sbjct 2369  TGCTTTGGAGCACAGATGACTCTGGGGGCAGAGGTGGGCTCTGTTTAGGAGGGCAGTGAGACCACCCAGCCAAA  2442

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2443  TTGCTTCTCAACCCTAGACAAAGCCTTTGGCCAAGAGGGAGGTGCTGTTAGTTGGGCAGCCCTTCTGGGTTTCA  2516

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2517  GAGACCGGTGTTGGCTCTAGACTGGTCTCATCTCCATTGCCTTAATGCCAGGTGGCCCAGGAGTACCCATGCAC  2590

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2591  AGCAGCTGTGGGGTGTGGGCATCTTCAGGTGGTGTTCTGGTAAAATTGTTAGAATAGCTGTATGAAGGAAACCA  2664

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2665  GTGGGAGGAAATGAAGTTTTCAGGATGGTGGGATGTGATTTAGACAGTGCACATGCTGTTAGGGCTGTCACTAG  2738

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2739  GGAGTGGCCTTCATGGAGGGTGGTAACAGCACCTCAGTCCAGCCAAAATGTTTAGAAACACTCAGTCTCTGGTC  2812

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2813  CCAGAGGATGGCTTCTCAGGGCATGCCACAAGTTAAAGGTCACCTTCCTGAAAGATGAATGAGAAAGCTGCCCA  2886

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2887  TTCTCAAGACTCATCTGCCTAGGGAGGGTCACAGAGGCAGGATGTAAGACACACTGTGTTGCATTCTTGCACAA  2960

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 2961  GTCATGAAAATGGAGCCAGAGAGCCTGGACATCAGGGACTTTTGCCCACAGCACATGACACCGACAGCTGCCCA  3034

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 3035  GCCTGTTCACATGCTGGGGACCAGCACAGCACCTGAAGCCATGTGGGACAGTTGGGCTTTGTTCATTCTAGCCA  3108

Query  247  --------------------------------------------------------------------------  246
                                                                                      
Sbjct 3109  CGGGGATGAAAGGGATCTTTTGCATTGCAGAGATTTTATATATATTTTGTTTGTAATGAGCCATTCTCAATAAA  3182

Query  247  -------------------  246
                               
Sbjct 3183  CATTATTCTCACTGCAAAA  3201

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