Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12773
Subject:
NR_104094.1
Aligned Length:
3572
Identities:
414
Gaps:
3099

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA  222

Query    1  -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG  49
                                     |||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct  223  ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG  296

Query   50  TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT  123
            ||.|||||||||..|..|||||.||.||||||||..|.||.|||||.|||                        
Sbjct  297  TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGG------------------------  346

Query  124  GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC  197
                                                                       ||||||||||||.||
Sbjct  347  -----------------------------------------------------------GGAGCTGACCAGCGC  361

Query  198  TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT  271
            ..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct  362  ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT  435

Query  272  TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT  345
            ||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct  436  TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA  509

Query  346  CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC  419
            ||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  510  CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC  583

Query  420  CTTTGGAAGTTTTTTGGGCATCGTTATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGC  493
            .||||||||||||||||||||.|||.|.||.||..||||||||||||||||.||.||||||||.|||||.||||
Sbjct  584  ATTTGGAAGTTTTTTGGGCATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCTTCGGTGC  657

Query  494  CTTTCACATCTATTTTTTCTCAGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGGAA---------  558
            ||||.|||||.|||||.||||||||.||||||||.||.|||||||||||..|||||||||||  |         
Sbjct  658  CTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAG--ATCGTCCGAC  729

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  730  GCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCATGATC  803

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  804  ATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCATACT  877

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  878  GTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATCCCAATGCTG  951

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  952  AAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTCAGAT  1025

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1026  TCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAA  1099

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1100  GGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACATATATGTACAGGCTGTACATACAGGG  1173

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1174  GTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATTTTTTTACAGAAAAAAATATGATATAC  1247

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1248  CTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAACACACTCTGTTGGCTACTGCCAAGGG  1321

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1322  TAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAGTTCTAGTAAGGGACAAAAGCTAACAC  1395

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1396  GTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATAACGTTCAAAATGAGGTCATGCCATCC  1469

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1470  AGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCACCGCACACTTTGATTCACCGAGTGGTT  1543

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1544  CTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGGGATGCAGATCGCAGAGATGCCGAGAA  1617

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1618  GCGTCAGGTACCTCATTCCTTGACACCGTCTTCTTCCATCCATCCCCGCACACTCCAGAAACACTTCAGTCCCA  1691

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1692  GCACAGAGTGTGTGTGGGGGCTGGGGGGGGGGGGGGGAGTGCAGCTTAGATGTATTATCGGCTGCTTCAGAGAA  1765

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1766  AGTCCTGGTGAGTGTTGCCGTGAACTCGGACAGTGCTTTGGGACGTCTGCAATCGTACCTCAGTATGCTTCTCC  1839

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1840  CTTCCATCATTCCTTAGTTTCCCATTTTACTTACACACAACATCCCCGTGCAACACCCAAATGTCACAGTCAGC  1913

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1914  TGGAGAGTCACAGAAATCAACAGTGGATTATGTGTTCACATTCCACAGCTGGTTCCAAGCACATTCCTGTTACA  1987

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1988  CTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTACATTAAGCGCACTTGAGACATCTGAGAAGATTTA  2061

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2062  TGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATCAAATCCTATCGCCTTAGGAGCCAGAGAAAATAA  2135

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2136  ACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACACTGCTAGTCAGGTGGAAGAAGGGCTGGTCCAGAA  2209

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2210  GAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGATGAGTCCGGGAACTGGGCACCAGCTTTGGAAAGG  2283

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2284  ACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAAGCAGCATACTGAACAGTGGTGGGAGCGTCTTTC  2357

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2358  CTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCTCCCCAGCAGCTGCCTTTGCTGTTGGTAGTGGGG  2431

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2432  GCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGGGCTTTTCAGTGGTGTTGGGTTATGTTATGGTTA  2505

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2506  GCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTACCGTGGTTGGCGCTGGTGTTATGGTGTTAGCACC  2579

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2580  AGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAGCATAGCTATAACACTGGTGTCAGGCCTGGCAGA  2653

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2654  GATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGAGGAGGCAGTGAGTCTGTTTGGTGAGTGTGCTGC  2727

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2728  CTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGCCTTGGGGCTTTAGAGGAAGTAGACACTGTCTGC  2801

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2802  CTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACACTGGTTTCCCCGCCGACCACATCTACCTCTCTGT  2875

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2876  GCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAACTTTTTCTCTTTTGCTTTAAAACTGTCTTTTGTT  2949

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2950  TTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTTAGTAACATGTCTGTGGCTACTTCTCCTTTTACA  3023

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3024  CAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAAAATCAAAATTTGCTTTAATTTATGCTCATTAGG  3097

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3098  ATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACTGCCAATGTCTGTTTTATGTATTTGTTTGTCCAA  3171

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3172  ATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACTCATTCCAACCTGGAATTGGTTTTAAACGGCTGG  3245

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3246  AACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAAACGTTAAGGTTCTGTGGATTTTTTAAATTCTTC  3319

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3320  CCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCAGTGTTTATGCTAAAAACCAAATTTTTTCAAAGA  3393

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3394  GATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAAAATTTAAAAAAAAAATTCTATGATTAAACAGAG  3467

Query  559  --------------------  558
                                
Sbjct 3468  AGTACTTGACGAATCTCTGG  3487

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