Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12773
Subject:
NR_133924.2
Aligned Length:
3538
Identities:
558
Gaps:
2980

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTCAGTGAGACTTTCCTGTCACTGGCTACTACTACTCCCAACCCTCCTCAAAGCCGCCGGAGCAACCCCCAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCTTTACTTTACAATCGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGGGACCAAGGAAAGTGTGGAGACGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCAAGGATTAGGTGATCGGAGCTTGAAAAGAAAAAAAGCCAAACAAATAAACAAAACCCACCCACCCTAACAAA  222

Query    1  -ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAAC  73
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAAC  296

Query   74  TGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACA  147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACA  370

Query  148  ATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCT  221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCT  444

Query  222  TTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACAC  295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACAC  518

Query  296  CCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATT  369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATT  592

Query  370  TTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCATCGT  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCATCGT  666

Query  444  TATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTCAGC  517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTCAGC  740

Query  518  TTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGGAA---------------------------------  558
            |||||||||||||||||||||||||||||||||||||||||                                 
Sbjct  741  TTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGGAATAATTCGGGTTTCACACCAGCAGACACAGTGGC  814

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  815  TATCATTTTCTGTTCTACACACAAATCCCTTACATTGGGAATTCCGATGCTGAAGATCGTGTTTGCAGGCCATG  888

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  889  AGCATCTCTCTTTAATATCTGTACCCTTGCTCATCTACCACCCAGCTCAGATCCTTCTGGGAAGTGTGTTGGTG  962

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  963  CCAACAATCAAGTCTTGGATGGTATCAAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTATAACAAAGGAG  1036

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1037  GTGGACTTTCTGTAGCAATGTATATATGTACAGGATTGTACATACTAGCAATTCTGAAGACTTGTACTTGTGAA  1110

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1111  TGTTGCCTCAATGCATATTTTATTTTTTTACACAAAAATATGAGATCCTGTTTAAGTGCCTTAAAATGTATTTG  1184

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1185  ACAAGAGCGTTATTTCCAAAATATGCTTTGTTGATTACTGCCAGGGGTGGTACAATATTTGGGGGTTAATTTTG  1258

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1259  CTTTCCTAATGCAGGAATCAGTCATGGTAAGTGACAAAAAGCAAACATGCTTTCCCTGCAGCACCTTTGTGCAA  1332

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1333  TACAACCCTATAGTAGTTACTGTAATGTTTGAAATGAGGTCACACCATCAGGAAAATGCCCTTCTGATGACAGT  1406

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1407  GAAAATTTCCAAAGTCTTATTCATGCATACTTTGATTTACTGTGTGATTCTTTTTTTCTACGACTGTGACATGC  1480

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1481  CTCTTCCTTATCAACTCAGCAGGGGTCATAGATCGAATAGATGCTGAAAAGCGTAAGATATATGCATTCCTTGA  1554

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1555  CATCATTTTTAAAGACATTCCTTCAAATAGTTTCCACACAGAAATTCCTCACTCCCATTATGAGAGATTGTGGT  1628

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1629  TATATGTCTTAAATTTATTATAAGCTGCTTCAAAGAAAGGGTCTGAATGTTTGAATTATGAGTGAAATCATGTG  1702

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1703  AAATTTTGAGTTAAACTCTGTGATTTGATTTTCAGGGTCTTTAAAATATATCTTAATATCTTCTTCCTCTTTAT  1776

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1777  TCAATAATTTCTGTCTTGCACTTACACACTCATAACAGCCAAATATGAGGCACAAAAATGTTACAATCAGTTTG  1850

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1851  AAAGCAGCATCAATTAATGGTAGATTCTATTCACATTCCACAACCCAGACCAAATTTTTTTCCTATTACGCAGA  1924

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1925  TGTGCTGAGCACTTTCCAGATTGCCCCTGTTGGCCAAAAGCAGCCTGTTACATCCTGGAATTAAGCACACTTAA  1998

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1999  GGTATTTGAGACAATTTATTAATGAAAATTTCCTTGGCAGATTTGACAAATGTTGGCAATATTTTTTTAGAAGT  2072

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2073  TAAATCATATTGCTTTCATGAATAAATGAAAATATAAAGGTCATGGATGCAAACAAATGTTACATATACACATT  2146

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2147  CTGTCTCTCCAGATGAAAAGAACATGCAAAACCATTTAATAACCAAAATATCAAGTAAAATTAGTTCCCAACGG  2220

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2221  GGCAGCAGCTTTCAAATGAGTGTCCAATATTTGCTTCTGCTATAGCTGCAAGAACTGTAACTGGACCCAAGTAG  2294

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2295  AGAATGAAGCCACGTATAGAACTACGAGAACACTTTTCTGTGTTTCCCCCATGCCGTCCTGTCACATCCTCTTA  2368

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2369  CACGTCCTCTCTTGATTTGATAGACAATATTGGCATCCTGGGTCTCACTGAGGCCGTGCTATGTCCTCAGCAGC  2442

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2443  TGTTTTTGTTGTTTCGTTATTATGCCCACAACAAAAAATCATTCCTTAGAAACTCACCAAGTTTATCTACTGTG  2516

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2517  TAAATTTATATTATTGTTACTACCAGGTCTCATCTTTTGTCAATGTCATTGAATAAATTTCATAAGAGTTATTC  2590

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2591  TCAGTGTGAATTTTAAGGCTAATGCCAGATCCTGCAAAAATCTATGCTAACCAGGCTGTAGTACACACTGTTAT  2664

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2665  AAAGAATTTTACTTGTGTCTAAAACTACAGTAATTTTGCTTAGGTAATTGTGCTTACCTATGGAGCACAGGAAG  2738

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2739  GCTCTTAGGTTTTGTTCCTACAAGTTTCTTTGAATTTTGGAGTAAATGGAAGTGTCTGTCTGTCTGTCATCTAT  2812

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2813  CTGCCCTATCATAAAAATCTTTCTCCCTAACATTAAAATACTGATCCCCGCCCCCAACTTATCTACCTCTATTG  2886

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2887  TCTAACACCTATAGTAGGTGTGATCATGGGATAAAATTCAACTGAAAATGCTATGATAACATTTTATCGTTTGC  2960

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2961  TTTAAAAATGTGCTTTGTTTTCAAATAATCTTTACATAGTGAACTTTGGTGGCGTTAGTGATATGTTTATGCCT  3034

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3035  ATTTCTTTTTTTTACACAAATTCCTTGGCATATTTTTTCATAAAGAACAAAAAATAAAATCAAAATTTATTTTT  3108

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3109  AATTCATGCTTATTGGGATTTAATTATTCAGAGCTTAAAATATTTTGTTATGTTTATACACTGTAAAGCTATCT  3182

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3183  GTTTTATGCATTTGTTTTGTCTAAATGTATTTATGAAAGAAATACATTAGATTATATTTATGTTTACTCATTTT  3256

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3257  TCCACCTGGATTTTTTTTAATGGTTGTTACAAAATTAGATTTTTTAATGGGTAATAATGTTGGTATTTTCATGT  3330

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3331  TTTTTCTTAGTATTAAAATTTTTGTGGGTTTTTTAAAATTTTTCCCTATTCTGTTAAAAATTAACACACCTCTA  3404

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3405  GCTAATGTTCAGTGTTTGTGCTAAATACCAAATTTTTTCAAAAGGATTGGTTAAGTCATAAAGTGGATTATTTA  3478

Query  559  ------------------------------------------------------------  558
                                                                        
Sbjct 3479  TGATGACTGGAAGATGAAAATAATTATATGATTAAACAAAGAATGTTTCAGAAATCACAA  3538

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