Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12773
Subject:
XR_387783.1
Aligned Length:
3302
Identities:
488
Gaps:
2746

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA  222

Query    1  -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG  49
                                     |||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct  223  ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG  296

Query   50  TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT  123
            ||.|||||||||..|..|||||.||.||||||||..|.||.|||||.||||||||||||||||||||.||||||
Sbjct  297  TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACT  370

Query  124  GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC  197
            ||.|||||||||||.||.|||||.||||||||.|||||||||||.|||||.|||||.||||||||||||||.||
Sbjct  371  GTGTCCTACATTGCCGTCGCAACGATATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGC  444

Query  198  TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT  271
            ..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct  445  ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT  518

Query  272  TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT  345
            ||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct  519  TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA  592

Query  346  CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC  419
            ||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  593  CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC  666

Query  420  CTTTGGAAGTTTTTTGGGCATCGTTATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGC  493
            .||||||||||||||||||||.|||.|.||.||..||||||||||||||||.||.||||||||.|||||.||||
Sbjct  667  ATTTGGAAGTTTTTTGGGCATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCTTCGGTGC  740

Query  494  CTTTCACATCTATTTTTTCTCAGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGGAA---------  558
            ||||.|||||.|||||.||||||||.||||||||.||.|||||||||||..|||||||||||  |         
Sbjct  741  CTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAG--ATCGTCCGAC  812

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  813  GCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCATGATC  886

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  887  ATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCATACT  960

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  961  GTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATAACTCGGGGT  1034

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1035  TCACACCAGCAGACACAGTGGCTATCATCTTCTGCTCCACACACAAGTCCCTCACCTTGGGAATCCCAATGCTG  1108

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1109  AAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTCAGAT  1182

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1183  TCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAA  1256

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1257  GGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACATATATGTACAGGCTGTACATACAGGG  1330

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1331  GTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATTTTTTTACAGAAAAAAATATGATATAC  1404

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1405  CTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAACACACTCTGTTGGCTACTGCCAAGGG  1478

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1479  TAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAGTTCTAGTAAGGGACAAAAGCTAACAC  1552

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1553  GTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATAACGTTCAAAATGAGGTCATGCCATCC  1626

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1627  AGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCACCGCACACTTTGATTCACCGAGTGGTT  1700

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1701  CTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGGGATGCAGATCGCAGAGATGCCGAGAA  1774

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1775  GCGTCAGCTGGTTCCAAGCACATTCCTGTTACACTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTAC  1848

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1849  ATTAAGCGCACTTGAGACATCTGAGAAGATTTATGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATC  1922

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1923  AAATCCTATCGCCTTAGGAGCCAGAGAAAATAAACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACAC  1996

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 1997  TGCTAGTCAGGTGGAAGAAGGGCTGGTCCAGAAGAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGAT  2070

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2071  GAGTCCGGGAACTGGGCACCAGCTTTGGAAAGGACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAA  2144

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2145  GCAGCATACTGAACAGTGGTGGGAGCGTCTTTCCTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCT  2218

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2219  CCCCAGCAGCTGCCTTTGCTGTTGGTAGTGGGGGCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGG  2292

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2293  GCTTTTCAGTGGTGTTGGGTTATGTTATGGTTAGCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTAC  2366

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2367  CGTGGTTGGCGCTGGTGTTATGGTGTTAGCACCAGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAG  2440

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2441  CATAGCTATAACACTGGTGTCAGGCCTGGCAGAGATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGA  2514

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2515  GGAGGCAGTGAGTCTGTTTGGTGAGTGTGCTGCCTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGC  2588

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2589  CTTGGGGCTTTAGAGGAAGTAGACACTGTCTGCCTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACAC  2662

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2663  TGGTTTCCCCGCCGACCACATCTACCTCTCTGTGCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAAC  2736

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2737  TTTTTCTCTTTTGCTTTAAAACTGTCTTTTGTTTTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTT  2810

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2811  AGTAACATGTCTGTGGCTACTTCTCCTTTTACACAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAA  2884

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2885  AATCAAAATTTGCTTTAATTTATGCTCATTAGGATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACT  2958

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 2959  GCCAATGTCTGTTTTATGTATTTGTTTGTCCAAATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACT  3032

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3033  CATTCCAACCTGGAATTGGTTTTAAACGGCTGGAACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAA  3106

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3107  ACGTTAAGGTTCTGTGGATTTTTTAAATTCTTCCCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCA  3180

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct 3181  GTGTTTATGCTAAAAACCAAATTTTTTCAAAGAGATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAA  3254

Query  559  ----------------------------------------------  558
                                                          
Sbjct 3255  AATTTAAAAAAAAAATTCTATGATTAAACAGAGAGTACTTGACGAA  3300

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