Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12945
Subject:
XR_001737530.1
Aligned Length:
4647
Identities:
731
Gaps:
3916

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCAGGGACTCTGACTGCGCAAGATGGAGTGTAGGCCGGCCGGCGAGACTGCACCTCCCAGCATGCCTTGCAGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGGACTGGAGTCGGTACTTAAGAGTGATGGGGTTCCCTAGATACTTTAGGCCGTCGCATCGATTATAGAGATTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGTGGAACCCGGGGCCTGGGAACTGGACGCACGCGGAGGGCGAAGATGGAAGCCTGGCGCTGTATACCCCATG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTTCCCCATCACTCGAGGAGTCTGGGCAGAGACTGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTGGAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGACATATTTCTAGTTGTATGAGGTGGCCTGGACATTACTCTCGAGCTCCTTACCCATACTTCAGTAGTAGGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATTTTTCACTAAATTGGAGACCACCCTGTTTGTTTGAGTCTAGAACTCAGTTCCAGTACTGTAACTGGAGACCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GACAACCTGAGCCAGACATCTTTGATTCATCTCTCTAGTTACGTCATGAACGCTGAGGGAGATGAGCCTTCATC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AAAACGAAGAAAACACCAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAACGA  592

Query    1  --------------------------------------------------------------------ATGTCC  6
                                                                                ||||||
Sbjct  593  AGATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATGTCC  666

Query    7  TATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACA  80
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACA  740

Query   81  CTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAG  154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAG  814

Query  155  TTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATG  228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATG  888

Query  229  CGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCC  302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCC  962

Query  303  AGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCA  376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCA  1036

Query  377  AAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGAT  450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGAT  1110

Query  451  ATTAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTG  524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATTAAGCTGACGCAATTGGCAATGCTACTGGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTG  1184

Query  525  CCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAAT  598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAAT  1258

Query  599  TGAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCT  672
            |||||||||||||||||||||||||||                                               
Sbjct 1259  TGAATTATGAAGGACTTCCCATAGGAA-----------------------------------------------  1285

Query  673  ATTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGA  746
                                                                                      
Sbjct 1286  --------------------------------------------------------------------------  1285

Query  747  AAAGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTT  820
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1286  ------AGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTT  1353

Query  821  CAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTAT------------------------------------  858
            ||||||||||||||||||||||||||||||||||||||                                    
Sbjct 1354  CAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACTTTCCTGACACTGGAATTCCAGAAGTG  1427

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1428  ACCACCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTACTCTGCAGAAAAGGAAGATGTTGCTGG  1501

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1502  GCACCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTTACAGAACAAG  1575

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1576  ACTTATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATCATCTGCCTTTATTGGCAAAGTTCAGA  1649

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1650  CTTGAGCTCTGACTCTCTTTGATCACATACTAATTTTCTTTCCAATTTGTATTGTTTTTCAAAGAATGTAAAGT  1723

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1724  TCTTAAGTGTATGCATGTTGTTTATTTTTGCACTGTGGAGATTCTGAAGCGGTTATGTTAGATGCTTTGAAACT  1797

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1798  CCATATCAGAAGAAATAACTTTATAACAATTTTTTTTAATAATGAAAAATATTTTCGTGACAAGTGAGCTCTAA  1871

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1872  ATTCTCTTTATTGTAAAAGAGATGTAAAGGTTTTATATTCTAAATCCTAGTAAAATTGACAGTGATTTTTAAAT  1945

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 1946  ATAATGCATCTTCCTTTGTCTGCTTAGTAAAAAATTTCATTTCATAATTTTGGCAAGCTCTGTAGTGGATCCAA  2019

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2020  AGTATCTTTGAGTTCTTGCAAACTACAAGTTGTTTCCTTTCCAGAAGGCTTGATTTCATTAGGAGACCCCTCTA  2093

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2094  TTGAGTTCTAAATAGTTTATCTTAGAAAGCCTTGGGTCATTCACAGGTATCCAACCAGCCATTGTTTAGTTTGT  2167

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2168  TTTTGAAGGGGTTTGATAATGCTTTTTAAGTTGTACAGAATGCTTAATCCATCTTATTACTGTCCTGAGCCATG  2241

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2242  TAATATGCCTGCATCGTGTTGGGGAAATGTTTGGGAAATATAAGCCAGCATAACGTGTAAAGCTCACTCTTTCA  2315

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2316  CCCTGGAACAGACAAGAGGTGGGCTTAATAGAGGCAGAGACTGGGGATATACCTTTGTTTCCCTAGCATTTTTA  2389

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2390  TTTATTTATTTTTATTTTATTTTATTTTTTGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGGGGTGCAATGG  2463

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2464  CGCAATCTTTGCTCACTGCAACCCCTGCCTCCCGGGCTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTG  2537

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2538  GGATTACAGGCATGCGTCACCACTCCCAGCTAATTTTGTATTTTCAGTAGAGACAGGGTTTCCCCATGTTGGTT  2611

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2612  AGGCTGGTCTCGAACTCCCAACCTCAGGTGATCCGCCCACCTCAGCTCTCAAAGTGCTGGGATTACAGGCGGGA  2685

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2686  GCCACTGCACATGGCAGCATTTTTTAAAAATTCAGTTTTAAGATCTCTGGTTTAGGGGAGAGATTTTATTTTAC  2759

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2760  TGAACCAGTTCTATAGAAATTTATTTTATTAGGAAATTTGTCTTTGGAACAAAGTGGCAGCTATAAAATTATTT  2833

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2834  TTGTTAAGCCTCAGAAATATGAGGAAGCCTGTAAAACTCTAGTGGGGAGATATTAACTTGGAGACCTAATGCTC  2907

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2908  TGTAAATAGTCATTTAAACTGTTGGTTTTAGTGGTTTTGTTTCTAAAATGTTTTCTTTTACCGTGATGCACCAG  2981

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 2982  TATGAGATGGTGCTGACACTTTCTATGAAGTGGTTATGAGCAGGTTTAATAAATCCTCTATACAAGTGTTTGAA  3055

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3056  TCAATTTTAAAACATAAAAAGTGGAAATTTCCTTTTTTGTAGACAGTAGGAACAAGGAATTATATGCATTTTTA  3129

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3130  CTAAGTAGTAATTTTACACTGAATTGTAAATGTTTTTACAGTGAGTTTTATTAATAGAATGCTTCACCTTAAAT  3203

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3204  TGGAAAACAATAATAGTCTTGGACTAAGTCTTTGTACTAAAGCATTTGCTATAATTATTTTTAAAAAAACAAAC  3277

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3278  AGATGAAAACCTCAGAGAAGGCATGTGGATTATAAGATTTGTCTAGTAAAAATTGTAATTGAATATGTTTAAAT  3351

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3352  ATTTAATTTCTCATTTTGGGGGGTTTTTATTTTTTTATTTTTTAGATGGTGTCTCACGCTATCGCCCAGGCTGG  3425

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3426  AGTGCAGTGGCGCGAACTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTTCCTCAGCCTCC  3499

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3500  CAAGTAGCTGGGATTACAGGCATGCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGAATTTTG  3573

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3574  CCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGT  3647

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3648  GATTACAGGCATGAGCCACCATGCCTGGCCTTTGGGGGGATTTTAATTACAGTATTAATTATAGTTCTAGGATT  3721

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3722  TCCCACATTTTATAGTAGTAGTTTGCAGGATATTATGTGCCCTAATTAGCAGATATAGACATTATCAAATTATA  3795

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3796  ATGATAGTATAATTATCCCTTTTTAATATTGGGGAAAGAAAAATGAAAATTCATTAGTTAATTACTGCTTTGTG  3869

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3870  TTGTGTGAATTTATTAACAAATAACATTATTACATATAGGTCATTGTTAACAAACAAACATCCCTGAAAACCTC  3943

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 3944  TGTGAAAATTTAATTTTTTATATCCTGATTAATATATTGTGACTTTAGGCCCATTTTTCATGTGCTTCACTTTG  4017

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4018  ATAGAGTTAATCCATAAAATTGCTCTTTACTTTAGCTTATCAAATGAAGTATTATTTTGTGGACTGGAGGCCAA  4091

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4092  AAAGTCAATGTGAGCTTCTCACAGGTTTTTAAAGCTCCACTAAAAATAATTATCCACTTGTCTTTACTTTTGTT  4165

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4166  GACCAGAATAGTTGGTAACTCTGCCAGAGCCTGTACTTACCTGCCAAAAACAATTAAATCTGGTTAATGCCTGA  4239

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4240  AACCAAATCTCTCAGTCTCAAGTGTTATACTATCCAAGTTTTAAATGGAAAGGTAAACTGTGGAGTAATGAAAT  4313

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4314  TTTGGTTTTACTGTACCTTTTGCTATCAAGATAATATTCATGTTTGAAATCTTGTCTTTATTTGGAATTTAGTT  4387

Query  859  --------------------------------------------------------------------------  858
                                                                                      
Sbjct 4388  ACTGTCTGCTTTTAACCTTTGCTTTCCTAAAGAAAGTTTGAGATCCAGAGAGTTCAAGGGATTGGGGAAAGAGA  4461

Query  859  -----------------------------------------------------------  858
                                                                       
Sbjct 4462  GGCGTCAAGTCATTTGCACTTTGTACCTGTAAGTTAGGTAATAAACTATTATACTCGTA  4520

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