Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12975
Subject:
XM_006507179.3
Aligned Length:
2896
Identities:
1389
Gaps:
1373

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGCGCACCTGAAAAAGCGGGTGTATGAGGAGTTCACTAAAGTGGTTCAGCAGCAGGAGGAAATTGCTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAAGAAGCTCCGATTAACAAAGCCGAGCAAATCTGCCGCTCTCCACATAGATCTGTGTAAAGCCACCTCCCCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGATGCTTTGCAGTACCTACTCCAGTTTGCCAGAAAGCCTGTAGAAGCAGAGAGTGTGGAGGGGGTAGTCAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTCTCTTGGAACATTATTACAAGGAAAATGATCCATCTGTGAGACTGAAAATTGCATCACTCTTGGGATTATT  296

Query    1  -----------------------------------------ATGCCATCAACATCCTGCAGAATGAAA------  27
                                                     |.|||||.|||||.||.||||||||||      
Sbjct  297  ATCAAAGACGGCAGGATTCTCTCCAGACTGCATAATGGACGACGCCATTAACATACTACAGAATGAAAAGTCTC  370

Query   28  --------------------------------------------------------------------------  27
                                                                                      
Sbjct  371  ACCAAGTGCTAGCTCAACTACTGGACACTTTGCTTGCAATTGGCAGTAAACTACCAGAAAATCAAGCTACCCAA  444

Query   28  ---------------------------CATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTT  74
                                       ||.|||||||||||.||.|||||||||||||||||||||.||||.||
Sbjct  445  GTGCGATTAGTGGATGTGGCCTGCAAGCACCTGACAGATACTTCCCATGGTGTAAGAAATAAGTGCTTGCAATT  518

Query   75  ACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGA  148
            |||||||||||||||||||||||||||||||||||||||||||.|.||||||..|||||||||||||||.||||
Sbjct  519  ACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATACTGAAGGCTCAGCTGCCAGAGATGTTCAGA  592

Query  149  AGATTATAGGGGATTACTTCAGTGACCAAGACCCACGTGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTC  222
            |.|||||.|||||..||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||
Sbjct  593  AAATTATCGGGGACCACTTCAGTGACCAAGATCCACGGGTCAGAACAGCAGCTATAAAAGCCATGTTGCAGCTC  666

Query  223  CATGAAAGAGGACTGAAATTACACCAAACAATTTATAATCAGGCCTGTAAATTACTCTCTGATGACTATGAACA  296
            |||||||||||||||||.|||||||||||.|||||||||||||||||||||||.||||||||||||||.||.||
Sbjct  667  CATGAAAGAGGACTGAAGTTACACCAAACGATTTATAATCAGGCCTGTAAATTGCTCTCTGATGACTACGAGCA  740

Query  297  AGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGCTCTATCCTGAAAGCATTGTCCCAATTCCTT  370
            .||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||.||.||.|||||.||.|
Sbjct  741  GGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTTGTCAGCCAGCTCTATCCTGAGAGTATAGTTCCAATACCGT  814

Query  371  CTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTGTCACATGGTCAGTGATGGCTCTTGG  444
            ||||||||||||||||.||..|||||||||||||.|||||.||||||||.||||||||||||||||||||.|||
Sbjct  815  CTTCTAATGAAGAAATCCGTCTAGTTGATGATGCATTTGGAAAAATTTGCCACATGGTCAGTGATGGCTCCTGG  888

Query  445  GTGGTTCGTGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCAGTTCTCATTTCTTGGAGCAGACCCT  518
            ||||||||||||||.||.|||||.||.||||||||.|||||||||||.||.||||||||||||||||||||.||
Sbjct  889  GTGGTTCGTGTTCAAGCTGCAAAGCTATTGGGCTCGATGGAGCAAGTTAGCTCTCATTTCTTGGAGCAGACTCT  962

Query  519  TGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGG  592
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct  963  TGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGCACTGCACATGAGCGTGCCAAGGAACTTTACAGTTCGG  1036

Query  593  GGGAGTTTTCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGAAGTAGATACCGGGGCTGTGAACTTG  666
            |||||||||||||||||||.||.|||||||||||||||||||||||||||.||||.||.|||||.||||||.||
Sbjct 1037  GGGAGTTTTCCAGTGGCAGGAAATGGGGAGATGATGCTCCCAAGGAAGAAATAGACACGGGGGCCGTGAACCTG  1110

Query  667  ATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGTATTGCTGCTGT  740
            ||.|||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1111  ATAGAGTCAGGAGCGTGTGGAGCCTTTGTTCATGGGTTGGAAGATGAGATGTATGAGGTTCGCATTGCTGCTGT  1184

Query  741  GGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAGTGCCTTGATTTCCTAGTTGACATGT  814
            ||||||.||.||||||.|.|||||||||||.||||||||||||||.|||||||||||.||.|||||||||||||
Sbjct 1185  GGAGGCTCTGTGCATGCTAGCCCAGTCTTCGCCCTCTTTTGCTGAAAAGTGCCTTGACTTTCTAGTTGACATGT  1258

Query  815  TCAACGATGAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAGAAAAATCTCTAACAACATCACCCTC  888
            ||||.|||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||||.|||||||||
Sbjct 1259  TCAATGATGAAATTGAGGAAGTGCGTCTGCAGTCCATACACACCATGAGAAAAATCTCTAACAATATCACCCTC  1332

Query  889  CGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCAGAGATATTCGAGAGGCTCTTCATGA  962
            |||||||||||||||||||||||||||||||||.||||||||||||||||.||||||.||||||||||||||||
Sbjct 1333  CGAGAAGATCAGCTTGACACTGTCCTGGCTGTGTTAGAGGATTCATCCAGGGATATTAGAGAGGCTCTTCATGA  1406

Query  963  ACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCATTGGTGGAGCTGCTGAAAAATTTAA  1036
            ||||||||||||.||||||||.|||||||||||||||||||||||||||.||||||||||.||.|||||..|||
Sbjct 1407  ACTCTTATGCTGCACTAATGTCTCAACCAAAGAAGGGATTCATCTTGCACTGGTGGAGCTTCTAAAAAACCTAA  1480

Query 1037  CCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGAAGTCGGCATCCAACCCTGGTG  1110
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||||.|||||.|||
Sbjct 1481  CCAAGTACCCTACTGACAGGGACTCCATATGGAAGTGCTTGAAGTTTCTGGGCAGCCGGCATCCGACCCTCGTG  1554

Query 1111  CTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAGCTGAACCAGACATGGATGATCCAGC  1184
            |||||..|||||||||||||..|||||||.||||||||||||||.||.|||||||||||||||||.||||||||
Sbjct 1555  CTTCCTCTGGTGCCAGAGCTCTTGAGCACGCACCCATTTTTTGATACTGCTGAACCAGACATGGACGATCCAGC  1628

Query 1185  TTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCAACAATGCCAGCATTGTTCTCAGATC  1258
            |||.|||||||||||.||.|||||.||||||||||||||.||||||||.||||||||||||.|.||||||||.|
Sbjct 1629  TTACATTGCAGTTTTAGTTCTTATCTTCAATGCTGCTAAGACCTGTCCTACAATGCCAGCACTCTTCTCAGACC  1702

Query 1259  ACACCTTCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGTAGA  1332
            |||||.||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||
Sbjct 1703  ACACCCTCAGGCACTATGCCTACCTCCGAGACAGCCTTTCTCATCTTGTTCCTGCCTTGAGGTTACCAGGGAGA  1776

Query 1333  AAACTGGTGTCATCAGCTGTTTCTCCC----AGCATCATACCTCAAGAGGATCCTTCCCAGCAGTTCCTGCAGC  1402
            |||||||||||.||..|||    ||||    |.|||||..|||||.||.|||||||||||||||||||||||||
Sbjct 1777  AAACTGGTGTCCTCCACTG----TCCCCTCTAACATCACCCCTCATGAAGATCCTTCCCAGCAGTTCCTGCAGC  1846

Query 1403  AGAGCCTTGAAAGAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAGGAGCTGCTGGAATTCACCATC  1476
            |||||||||||||.|||||||||.||||||||.|.||.||||||||.|||||.|||||||||||||||||||||
Sbjct 1847  AGAGCCTTGAAAGGGTGTATAGTGTTCAGCACCTAGATCCTCAGGGGGCCCAAGAGCTGCTGGAATTCACCATC  1920

Query 1477  AGAG-------------TCGAG-GTTTCACCATG--GTGGCCAG-----GCTG---------------------  1508
            ||||             |.||| |.||||...||  .||| |||     ||||                     
Sbjct 1921  AGAGATCTGCAAAGACTTGGAGAGCTTCAGTCTGAATTGG-CAGGAGTAGCTGACTTCTCTGCCACCTATCTTC  1993

Query 1509  -GTCTCAA--ACTCCTGAGCTCAAG-------------------------------------------------  1530
             ||.||||  .|||||.|  |.|||                                                 
Sbjct 1994  AGTGTCAACTGCTCCTCA--TTAAGGCCTTGCAGGAAAAGCTGTGGAATGTGGCTGCCCCCTTGTATCTAAAGC  2065

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2066  AGAGTGATTTGGCCTCAGCAGCAGCAAAACAGATCATGGAGGAAACCTACAAAATGGAGTTTATGTACAGTGGT  2139

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2140  GTGGAAAACAAGCAGGTTGTGATCATACAGCACATGAGGCTTCAGGCCAAAGCTCTGCAACTCATAGTAACTGC  2213

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2214  ACGAACTACTCGAGGAGTAGACCCCTTATTTGGAATGTGTGAAAAATTTTTACAGGAAGTGGATTTTTTTCAGA  2287

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2288  GGTGTTTCATTGCGGATTTGCCCCACCTTCAAGATAGCTTTGTGGACAAACTCCTTGATCTTATGCCCCGACTC  2361

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2362  ATGGCATCTAAACCTGTTGAAGTGATCAAAATTCTGCAGACAATGCTGCGGCAGAGCACCTTCTTACATCTTCC  2435

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2436  GCTTCCAGAGCAGATACACAAAGCCTCAGCCACCATTATTGAGCCGGCAGGAGAGTCAGACAATCCTTTGCGGT  2509

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2510  TTACATCTGGGTTGGTGGTAGCCTTGGATGTGGATGCAACCCTGGAACATGTGCAAGACCCCCAGAACACTGTC  2583

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2584  AAGGTTCAGGTCTTATATCCAGATGGCCAGGCTCAGATGATCCACCCCAAGCCAGCAGATTTCCGGAATCCTGG  2657

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2658  CCCAGGACGGCACCGTCTCCTCACTCAGGTGTACCTCTCCCATACTGCCTGGACAGAACCATGCCAAGTGGAAG  2731

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2732  TGAGGCTATTGCTGGCCTACAACTCCGGTGCACGAATTCCAAAATCTCCATGGCTGGAGGGTAGTGAGATGTCA  2805

Query 1531  --------------------------------------------------------------------------  1530
                                                                                      
Sbjct 2806  CCACAGGTGGAAACCAGCATCGAGGGCACCATCCCCTTCAGTAAGCCTGTGAAAGTCTACATAATGCCCAAGCC  2879

Query 1531  ----------  1530
                      
Sbjct 2880  TGCAAGACGC  2889

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