Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12984
Subject:
NM_001040272.6
Aligned Length:
5313
Identities:
1368
Gaps:
3939

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAATGCTGCCGTCGGGCAACTCCTGGCACACTGCTCCTCTTTCTGGCTTTCCTGCTCCTGAGTTCCAGGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCACGCTCCGAGGAGGACCGGGACGGCCTATGGGATGCCTGGGGCCCATGGAGTGAATGCTCACGCACCTGCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGGTGGGGCCTCCTACTCTCTGAGGCGCTGCCTGAGCAGCAAGAGCTGTGAAGGAAGAAATATCCGATACAGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAGCAATGCTCAGCTCATAATGATGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAAGCACCATGGCCAGTTTTATGAATGGCTTCCTGTGTCTAATGACCCTGACAACCCATGTTCACTCAAGTGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGCCAAAGGAACAACCCTGGTTGTTGAACTAGCACCTAAGGTCTTAGATGGTACGCGTTGCTATACAGAATCT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTGGATATGTGCATCAGTGGTTTATGCCAAATTGTTGGCTGCGATCACCAGCTGGGAAGCACCGTCAAGGAAGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TAACTGTGGGGTCTGCAACGGAGATGGGTCCACCTGCCGGCTGGTCCGAGGGCAGTATAAATCCCAGCTCTCCG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAACCAAATCGGATGATACTGTGGTTGCAATTCCCTATGGAAGTAGACATATTCGCCTTGTCTTAAAAGGTCCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GATCACTTATATCTGGAAACCAAAACCCTCCAGGGGACTAAAGGTGAAAACAGTCTCAGCTCCACAGGAACTTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCTTGTGGACAATTCTAGTGTGGACTTCCAGAAATTTCCAGACAAAGAGATACTGAGAATGGCTGGACCACTCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CAGCAGATTTCATTGTCAAGATTCGTAACTCGGGCTCCGCTGACAGTACAGTCCAGTTCATCTTCTATCAACCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATCATCCACCGATGGAGGGAGACGGATTTCTTTCCTTGCTCAGCAACCTGTGGAGGAGGTTATCAGCTGACATC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGCTGAGTGCTACGATCTGAGGAGCAACCGTGTGGTTGCTGACCAATACTGTCACTATTACCCAGAGAACATCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AACCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGCAGATCATGCCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TATGACCTCTACCATCCCCTTCCTCGGTGGGAGGCCACCCCATGGACCGCGTGCTCCTCCTCGTGTGGGGGGGG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCATGTACACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGGTCTCCGTGCACAGTGACATGTGGCCAGGGCCTCAGATACCGTGTGGTCCTCTGCATCGACCATCGAGGAAT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GCACACAGGAGGCTGTAGCCCAAAAACAAAGCCCCACATAAAAGAGGAATGCATCGTACCCACTCCCTGCTATA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AACCCAAAGAGAAACTTCCAGTCGAGGCCAAGTTGCCATGGTTCAAACAAGCTCAAGAGCTAGAAGAAGGAGCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCTGTGTCAGAGGAGCCCTCGTTCATCCCAGAGGCCTGGTCGGCCTGCACAGTCACCTGTGGTGTGGGGACCCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GGTGCGAATAGTCAGGTGCCAGGTGCTCCTGTCTTTCTCTCAGTCCGTGGCTGACCTGCCTATTGACGAGTGTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AAGGGCCCAAGCCAGCATCCCAGCGTGCCTGTTATGCAGGCCCATGCAGCGGGGAAATTCCTGAGTTCAACCCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GACGAGACAGATGGGCTCTTTGGTGGCCTGCAGGATTTCGACGAGCTGTATGACTGGGAGTATGAGGGGTTCAC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CAAGTGCTCCGAGTCCTGTGGAGGAGGTGTCCAGGAGGCTGTGGTGAGCTGCTTGAACAAACAGACTCGGGAGC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTGCTGAGGAGAACCTGTGCGTGACCAGCCGCCGGCCCCCACAGCTCCTGAAGTCCTGCAATTTGGATCCCTGC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCAGCAAGGTGGGAAATTGGCAAGTGGAGTCCATGTAGTCTCACATGTGGGGTCGGCCTACAGACCAGAGACGT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CTTCTGCAGCCACCTGCTTTCCAGAGAGATGAATGAAACAGTCATCCTGGCTGATGAGCTGTGTCGCCAGCCCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AGCCCAGCACGGTGCAAGCTTGTAACCGCTTTAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGCAGCCGTGT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TCCAGAACGTGTGGCGGGGGTGTTCAGAAACGTGAGGTTCTTTGCAAGCAGCGCATGGCTGATGGCAGCTTCCT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GGAGCTTCCTGAGACCTTCTGTTCAGCTTCAAAACCTGCCTGCCAGCAAGCATGCAAGAAAGATGACTGTCCCA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GCGAGTGGCTTCTCTCAGACTGGACAGAGTGTTCCACAAGCTGCGGGGAAGGCACCCAGACTCGAAGCGCCATT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TGCCGAAAGATGCTGAAAACCGGCCTCTCAACGGTTGTCAATTCCACCCTGTGCCCGCCCCTGCCTTTCTCTTC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CTCCATCAGGCCCTGTATGCTGGCAACCTGTGCAAGGCCCGGGCGGCCATCCACGAAGCACAGCCCGCACATCG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CGGCCGCCAGGAAGGTCTACATACAGACTCGCAGGCAGAGGAAGCTGCACTTCGTGGTGGGGGGCTTCGCCTAC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CTGCTCCCCAAGACGGCGGTGGTGCTGCGCTGCCCGGCGCGCAGGGTCCGCAAGCCCCTCATCACCTGGGAGAA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GGACGGCCAGCACCTCATCAGCTCGACGCACGTCACGGTGGCCCCCTTCGGCTATCTCAAGATCCACCGCCTCA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AGCCCTCGGATGCAGGCGTCTACACCTGCTCAGCGGGCCCGGCCCGGGAGCACTTTGTGATTAAGCTCATCGGA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GGCAACCGCAAGCTCGTGGCCCGGCCCTTGAGCCCGAGAAGTGAGGAAGAGGTGCTTGCGGGGAGGAAGGGCGG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CCCGAAGGAGGCCCTGCAGACCCACAAACACCAGAACGGGATCTTCTCCAACGGCAGCAAGGCGGAGAAGCGGG  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GCCTGGCCGCCAACCCGGGGAGCCGCTACGACGACCTCGTCTCCCGGCTGCTGGAGCAGGGCGGCTGGCCCGGA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GAGCTGCTGGCCTCGTGGGAGGCGCAGGACTCTGCGGAAAGGAACACGACCTCGGAGGAGGACCCGGGTGCAGA  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  GCAAGTGCTCCTGCACCTGCCCTTCACCATGGTGACCGAGCAGCGGCGCCTGGACGACATCCTGGGGAACCTCT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CCCAGCAGCCCGAGGAGCTGCGCGACCTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGAGATCTTCCGC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  AGCCACCTGGAGCACCAGGACACGCTCCTGAAGCCCTCGGAGCGCAGGACTTCCCCAGTGACTCTCTCGCCTCA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TAAACACGTGTCTGGCTTCAGCAGCTCCCTGCGGACCTCCTCCACCGGGGACGCCGGGGGAGGCTCTCGAAGGC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CACACCGCAAGCCCACCATCCTGCGCAAGATCTCAGCGGCCCAGCAGCTCTCAGCCTCGGAGGTGGTCACCCAC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CTGGGGCAGACGGTGGCCCTGGCCAGCGGGACACTGAGTGTTCTTCTGCACTGTGAGGCCATCGGCCACCCAAG  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GCCTACCATCAGCTGGGCCAGGAATGGAGAAGAAGTTCAGTTCAGTGACAGGATTCTTCTACAGCCAGATGATT  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  CCTTACAGATCTTGGCACCAGTGGAAGCAGATGTGGGTTTCTACACTTGCAATGCCACCAATGCCTTGGGATAC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  GACTCTGTCTCCATTGCCGTCACATTAGCAGGAAAGCCACTAGTGAAAACGTCACGAATGACAGTGATCAACAC  3848

Query    1  -----------------------------------------------------------ATGTG---TTTGACT  12
                                                                       |||||   .|..|||
Sbjct 3849  GGAGAAGCCTGCAGTCACAGTCGATATAGGAAGCACCATCAAAACAGTGCAGGGAGTGAATGTGACAATCAACT  3922

Query   13  G--ATGAGTGGGGTTTTTTGTTTTTTTTTTTCTTCCTAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAAT  84
            |  |       ||||                    ..|||||||||||||||||||||||||||||||||||||
Sbjct 3923  GCCA-------GGTT--------------------GCAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAAT  3969

Query   85  AAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCA  158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3970  AAAAGCAAACTGGGCTCCCCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCA  4043

Query  159  GGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGATC  232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4044  GGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGATC  4117

Query  233  CCCCCCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTG  306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4118  CCCCCCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTG  4191

Query  307  CTGACGTCTCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCAAAGG  380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4192  CTGACGTCTCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCAAAGG  4265

Query  381  TCACCCTGTCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACA  454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4266  TCACCCTGTCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACA  4339

Query  455  TCTTGGCAGCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCC  528
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 4340  TCTTGGCAGCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCT  4413

Query  529  CAGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACT  602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4414  CAGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACT  4487

Query  603  GGCAACCTGCTCAGCCTCCTGTGGTAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGG  676
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4488  GGCAACCTGCTCAGCCTCCTGTGGTAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGG  4561

Query  677  AGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGC  750
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4562  AGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGC  4635

Query  751  CCTTCTCGGTGGATGGTGACCTCCTGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGT  824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4636  CCTTCTCGGTGGATGGTGACCTCCTGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGT  4709

Query  825  GACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGC  898
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4710  GACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGC  4783

Query  899  GGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAAT  972
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4784  GGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAAT  4857

Query  973  GGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTT  1046
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4858  GGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTT  4931

Query 1047  ACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTAC  1120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4932  ACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTAC  5005

Query 1121  ACTGGAGAGTCAGCCTGTGGACCCTGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGTGGAG  1194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5006  ACTGGAGAGTCAGCCTGTGGACCCTGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGTGGAG  5079

Query 1195  TGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCA  1268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5080  TGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCA  5153

Query 1269  GCGCTGCAACATCACCCCATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGC  1342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5154  GCGCTGCAACATCACCCCATGTGAAAACATGGAGTGCAGAGACACCACCAGGTACTGCGAGAAGGTGAAACAGC  5227

Query 1343  TGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG  1401
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5228  TGAAACTCTGCCAACTCAGCCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG  5286

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