Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12984
- Subject:
- XM_006538377.1
- Aligned Length:
- 5942
- Identities:
- 1153
- Gaps:
- 4609
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTTGCTAGGGTCCGGCTCTGGGCACCGAAGGACCTTTCCCTCTCAGGATGGCCAGGGTGGCATTCCAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGGAGCAAAGCGAACAGCTGTGACCTTCCTTTAAAAATGAAGAAAGAGGCAGAAAGCAGCCCTGCTCGTTTTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTATCCCCACCCCCACCCCCGGACACATCGTGCTGCCTGGACGGCGCTTGGCTGACCCTAGAGGGAGGAGCAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGGTGCTGGGGCGGGGTCGCCCAGCCACCGGGCGGGGACTGCCCCACTCACGCGGAACGCCCCCAGCCAGGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACGCGCTCCCATTCAAAGCAGCAGGGCTGCAAGGCCGCTGCAGTGACGCGCCCACCCGGCCCTGTGCTGCGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCCAGCCTGGGGTCCGCAGTTATCGCTCCACAACTCCTCCAGGACCATGGCAAGGCTGGTGACGCGTAACCGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCGGGTTCCTGGCTCGCCTCATCGGTGGCATCTGGTGCCTCCTCTGTGTCGCAGGACAGGTATGTGGAGACCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGCCAAGGGGCTGTTTTCCTGAGGGAATTTACACTGATTCGAAGAGAGAGCCTTCATGAAGAGTTCCTGTCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACTTCTTGAATAGTCACAAAACTGAAGACCCGAGTTCCAGGACTGCACGCTCAGAGGAAGACCGTGAAGGCCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGGATGCCTGGGGCCCTTGGAGCGAGTGTTCCAGAACCTGTGGTGGGGGTGCCTCCTATTCCCTGAGACGCTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTGAGCAGCAAGAGCTGTGAAGGGAGAAATATTCGATATAGAACATGCAGTAATGTGGACTGCCCACCAGAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGGTGATTTCCGAGCTCAACAGTGTTCTGCTCATAACGACGTCAAGTACCATGGACAGCTTTATGAATGGCTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGTATCTAATGACCCCGACAATCCATGCTCACTCAAGTGCCAAGCAAAAGGAACCAGCCTGGTTGTGGAACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCACCGAAGGTCTTAGATGGTACGCGATGCTATACAGAATCACTGGATATGTGCATCAGCGGCCTATGCCAAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGTTGGCTGTGATCACCAGCTGGGGAGCACTGTCAAAGAGGATAACTGTGGAGTGTGCAACGGAGATGGCTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGTGCCGGCTGGTCCGAGGGCAGTATAAATCTCAGCTCTCTGCAAGTAAATCGGATGACACCGTGGTCGCCAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCTTACGGCAGCAGACACATCCGCCTTGTCTTAAAAGGGCCAGATCATTTGTATCTGGAGACCAAGACCCTCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGGAACTAAAGGTGAAAATAGTCTGAGCTCTACAGGCATTTTCCTTGTGGACAATTCTACAGTGGACTTCCAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAACTTCCAGACAAAGAGATACTGAGGATGACTGGGCCACTGACAGCAGATTTCATCATCAAGATCCATGACTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGGACCTGCAGACAGCACCGTCCAGTTCATCTTCTACCAGCCCATCATCCACCGATGGAGGGAAACAGACTTCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTCCTTGCTCAGCAACGTGTGGTGGAGGCTACCAGCTGACGTCTGCCGAGTGCTATGATCTACGGAGTAACCGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGGTGGCCGACCAGTACTGTCACTACTACCCCGAGAACGTCAAGCCCAAACCCAAGCTTCAGGAGTGCAACTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGATCCTTGTCCAGCCAGTGACGGATACAAGCAGATCATGCCTTATGACCTCTACCATCCCCTTCCTCGGTGGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGCCACCCCGTGGACCGCGTGCTCCTCCTCATGTGGGGGGGGCATCCAGAGCCGGGCAGTTTCCTGTGTGGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAATGCATGTACACCCCAAAGATGCCAGTCGTGCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAGTGGTCTCCGTGCACAGTGACCTGTGGCCAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCCTCAGATACCGCGTGGTACTCTGCATTGACCACCGAGGAATGCACACAGGAGGCTGCAGTGCTAAAACAAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCCCACATAAAAGAAGAATGCATCATTCCCACACCGTGCTACAAGCCCAGAGAGAAACTTCCAATAGAGGCCAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCTGCCATGGTTCAAGCAAGCCCAGGAGCTAGAGGAAGGAGCTGCAGTGTCTGAAGAGCCTTCGTTCATCCCAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAGCTTGGTCGGCCTGTACTGTCACCTGTGGCGTGGGGACACAGGTGCGAATAATAAGATGCCAGGTGCTCCTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCTTTCTCTCAGTCTGTGGCTGACCTGCCTGCGGATGAATGCGAAGGGCCTAAGCCAGCATCGCAACGTGCCTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTATGCGGGACCGTGCAACGGGGAAACTCCGGAATTTAACCCGGATAACGGAGACGGACTCTTGGGTGGCCTGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGGACCTGGACGAGCTGTATGACTGGGAATATGAGGGCTTCACCAAGTGCTCTGAGTCATGTGGAGGAGGTGTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAGGAGGCTGTGGTAAGCTGCCTGAACAAACAGACCCGGGAACTCGCTGATGAGAACCTGTGTGTGACCAGCCG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ACGGCCCCCGCAGCTCCTGAAATCCTGTAACTTGGATCCCTGCCCAGCAAGGTGGGAAATTGGCAAGTGGAGCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CATGTAGCCTCACCTGTGGGGTTGGCCTGCAGACCAGAGATGTTGTCTGTTCCCACCTACTCTCCAGAGAGATG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AACGAGGTGGTTGTCCTGGCCGATGAGCTGTGCCATCACCCCAAACCCAGCACAGTGCAAGCCTGCAACCGTTT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGCAGCTGTGTTCCAGGACCTGTGGAGGAGGGATTCAGAAAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GTGATGTTCTCTGCAAGCAGCGTATGGCTGACGGCAGCTTCCTGGAGCTTCCAGAGACCTTCTGTTCTGCCTCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAACCAACCTCCCACCAAGGGTGCAAGAAAGATGACTGCCCCAGTGAGTGGCTTCTCTCAGAGTGGTCAGAGTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTCTGTGAGCTGTGGGGAGGGCACCCAGACTCGAAGTGCCATTTGCCAGAGGGTGCTGAAAACTGGGGTCTCCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGTTGTCAATTCTACTTTGTGCCCTCCCCTGCCCTTCTCTTCCTCCATCAGACCCTGTATGCTGGCAACCTGT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GCAAGGCCTGGAAGGCCTTCCACCAAGCACAGTCCTCACATCGCAGCTGCACGAAACATATACATCCAGACCCG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CAGGCAGAGGAAGCTGCACTTCGTTGTGGGAGGATTTGCTTACCTGCTTCCCAAGACTACCGTGGTGCTCCGGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GTCCCACACGCAGATTCCGCAAGCCCCTCATCACGTGGGAAAAGGACGGCCAGCACAGCATCAGCTCGGCTCAT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GTCACCGTAGCCCCTTTTGGCTACCTGAAGATCCATCGCCTCAAGCCCTCAGATGCGGGCATCTACACCTGTTC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TGCGGGGCCCGCCCGGGAGCAGTTTGTGATTAAGCTCATTGGAGGCAACCGCAAGCTCGTGGCCAGGCCCCTGA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GCCTTTGGAGTGAGGAAGAGGAGGCCCTGCAGGTGAGGAAGACCAATCCAAAAGAAGCCTTGCAAACCCACAAA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CACCAAAATGGCATCTTCTCCAACGGCAGCAAAGCTGAGAAGCGCGGCCTCACTGCAGATCCTGGGAACCGCTA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGATGACATTGTGTCTAGGCTGTTGGAGCAGGGCGGCTGGCCAGGAGAGCTCCTGGCCTCGTGGGAGGTGCAGG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ACTCTGCAGAAAGGAACGCATCCTCAGAAGAGGATCCCAATGCTGAACAGGCCCTCCTGCATCTCCCCTTCACC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATGGTGGCCGAGCAGAAGCGTCTGGATGACATCCTCAGGAACCTGTCCCAGCAGCCAGAGGAGCTACGGGACCT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGACATCTTCCGAAGCCACCTGGAGAACCAGGATCTGCTTC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CTAAGCCCTCTGAGCAGAGGTTTCCTCCCATGGCCGTCCCAGCTCACAAACATGTCTCTGGCTTCAGCAGCTCC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CTAAGGAGCTCATCTGGAGAGGCTGGAGGTGGCTCCCGTAGGCCTCATCGCAAGCCCGCCATCTTGCGGAAGAT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CTCAGCGGCACAGCAACTCTCAGCCTCGGAGGTAGTCACCCACCTGGGGCAGACTGTGGCTCTAGCCAGTGGGA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CCCTGAGTGTGCTTCTGCACTGTGAGGCGGTAGGCAACCCAAGGCCCACCATCCACTGGACCAGGAACGGAGAA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GCAGTTCAATTCAGTGACAGGATTCTTCTACAGCCAGATGATTCCTTACAGATCTTGGCACCAGTGGAAGCTGA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TGTGGGTTTCTATACTTGCAATGCCACAAATGCCTTGGGATATGACTCTGTCTCCATTGCTGTCACATTAGCAG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GAAAGCCACTAGTGAAGACATCCCGAATGACTGTGCTCAACACAGAGAAGCCTACAGTCACAGTGGATATCGGT 4440
Query 1 ----------------------------ATGTG---TTTGACTGATGAGTGGGGTTTTTTGTTTTTTTTTTTCT 43
||||| .||.||||...|||||
Sbjct 4441 GGCACCGTCAGAACCGTCCGAGGAGTGAATGTGACAATTAACTGCCAAGTGG---------------------- 4492
Query 44 TCCTAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAATAAAAGCAAACTGGGCTCC--------------- 102
.|||.||.|||||||||||||||||.||||||||.||||||||||||.||||||||
Sbjct 4493 ---CAGGTGTACCTGAAGCTGAAGTCACCTGGTTCAGAAATAAAAGCAAATTGGGCTCCTCCCACCACCTGCAT 4563
Query 103 ----------CCGCACCATCTGCACGAAGGCTCCTTGCTGCTCACAAACGTGTCCTCCTCGGATCAGGGCCTGT 166
|| |||||.|||||.||.||||||||||||||||||.|.|||||||.|||.|||||.|||||||
Sbjct 4564 GAGGGCTCCTCC-CACCACCTGCATGAGGGCTCCTTGCTGCTCACAGATGTGTCCTTCTCTGATCAAGGCCTGT 4636
Query 167 ACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAGCACCCAGCTGCTGATCCTAGATCCCCCCCAA 240
|.|||||||||||.||||||||.||.|||||.|.|||.||||||||.|||||.|||||.|||||||||||.|||
Sbjct 4637 ATTCCTGCAGGGCAGCCAATCTACACGGAGAACAGACAGAGAGCACGCAGCTCCTGATTCTAGATCCCCCGCAA 4710
Query 241 GTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTGCCACTGGACCGAACCTTCCTTCAGTGCTGACGTC 314
||||||||||||||||||||||||||||||||||||...|||||||||||||||||||||||.|||||.|.|||
Sbjct 4711 GTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCTTAGCCACTGGACCGAACCTTCCTTCGGTGCTTATGTC 4784
Query 315 TCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCTGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCTG 388
.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||..
Sbjct 4785 CCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCCGCTCTCCTTGGCTGCCCCATCAAAGGTCACCCCA 4858
Query 389 TCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCACTGCCACAGGACTGACGCATCACATCTTGGCA 462
.|||.||||||||||||||.||...|||.||||||||||.|||||||.|.||.|||||.||.|||||||.||.|
Sbjct 4859 CCCCCAATATCACCTGGTTCCAAAATGGCCAGCCAATTGCCACTGCCCCGGGGCTGACCCACCACATCTGGGGA 4932
Query 463 GCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTCAAGGGGAATTCAGCTGCCTTGCCCAGAATGA 536
||||||||||||||.|.|||||||||.||.||.||.||..||||||||||.|||||||||||.||.||||||||
Sbjct 4933 GCTGGACAGATCCTACGAGTTGCAAATCTCAGTGGAGGACCTCAAGGGGAGTTCAGCTGCCTGGCTCAGAATGA 5006
Query 537 GGCAGGGGTGCTCATGCAGAAGGCATCTTTAGTGATCCAAGATTACTGGTGGTCTGTGGACAGACTGGCAACCT 610
.||||||...|||.|||||||.||.|||||.|||||||||||||||||||||||||||||.|||||||||||||
Sbjct 5007 AGCAGGGACCCTCCTGCAGAAAGCCTCTTTGGTGATCCAAGATTACTGGTGGTCTGTGGATAGACTGGCAACCT 5080
Query 611 GCTCAGCCTCCTGTGGTAACCGGGGGGTTCAGCAGCCCCGCTTGAGGTGCCTGCTGAACAGCACGGAGGTCAAC 684
||||.||.||.||||||||..|.||..||||.|||||.||..|.|||||..|.|||||||.||||||.||..||
Sbjct 5081 GCTCCGCATCTTGTGGTAATAGAGGCATTCATCAGCCGCGACTCAGGTGTTTACTGAACACCACGGAAGTTGAC 5154
Query 685 CCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCATCGCGTGCAACCGGAGAGACTGCCCTTCTCG 758
||||..|||||..||||.|||..|||.||.||.||||||||..|.||.|||||||||||||||||.||||||||
Sbjct 5155 CCTGAGCACTGTACAGGAAAGCCTCGGCCCGCCGTGCAGCCTGTTGCCTGCAACCGGAGAGACTGTCCTTCTCG 5228
Query 759 GTGGATGGTGACCTCCTGGTCTGCCTGTACCCGGAGCTGTGGGGGAGGTGTCCAGACCCGCAGGGTGACCTGTC 832
.|||||||||||.||||||||.||||||||||||||.||.||.||||||||.||.|||||.|||||||||||||
Sbjct 5229 ATGGATGGTGACGTCCTGGTCCGCCTGTACCCGGAGTTGCGGTGGAGGTGTACAAACCCGAAGGGTGACCTGTC 5302
Query 833 AAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGACATGTGCACCCAGGTCGCCAAGCGGCCTGTG 906
|.|||.|||||||.|||||.||.||.|||||.|||||||||||||||||||..||..|.|||||.|||||||||
Sbjct 5303 AGAAGTTGAAAGCTTCTGGTATTTCTACCCCGGTGTCCAATGACATGTGCAGTCAACTGGCCAAACGGCCTGTG 5376
Query 907 GACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTG 980
||||||||||||||.|||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 5377 GACACCCAGGCCTGCAACCAGCAGCTCTGTGTGGAATGGGCCTTCTCCAGCTGGGGCCAGTGCAATGGGCCTTG 5450
Query 981 CATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGCCAGACACGGGATGGCATCACCTTACCATCAG 1054
|||.||.||||.|||.||||||||.|||||.||.||||||||||||||.|||||||||||||||||||||||||
Sbjct 5451 CATAGGCCCTCGCCTTGCTGTGCAGCACAGGCAGGTCTTCTGCCAGACCCGGGATGGCATCACCTTACCATCAG 5524
Query 1055 AGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGA 1128
|||||||||||||.||.||.|||||.|||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 5525 AGCAGTGCAGTGCCCTCCCCAGGCCCGTGAGCACCCAAAACTGCTGGTCAGAGGCCTGCAGTGTACACTGGAGA 5598
Query 1129 GTCAGCCTGTGGACCCTGTGCACAGCTACCTGTGGCAACTACGGCTTCCAGTCCCGGCGTGTGGAGTGTGTGCA 1202
||||||||.||||||||.|||||.||.||||||||||||||.|||||||||||||||||.|||||||||||.||
Sbjct 5599 GTCAGCCTCTGGACCCTATGCACGGCAACCTGTGGCAACTATGGCTTCCAGTCCCGGCGGGTGGAGTGTGTTCA 5672
Query 1203 TGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGGGGGCCCCGGCCTGCCAACTGGCAGCGCTGCA 1276
.|..||||||||||||||.|||||.|||||||||||.|||||||||||||||||.|||||||||||.|||||||
Sbjct 5673 CGTGCGCACCAACAAGGCTGTGCCCGAGCACCTGTGTTCCTGGGGGCCCCGGCCCGCCAACTGGCAACGCTGCA 5746
Query 1277 ACATCACCCCATGTGAAAACATGGAGTGC-------------AGAGACA--------------------CCACC 1317
||.||||.|||||||||||| |||.| ||| ||| |||.|
Sbjct 5747 ACGTCACTCCATGTGAAAAC----AGTACGTTCCAATCCCAAAGA-ACATTCTGCAAATTCCCTACAGGCCATC 5815
Query 1318 AGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCC--AACTCAG----------CCAGTTTAAATCTCGCTG 1379
.||||| ||| |.|.||...|||..|||..||| |||.||| |.||| ||.|
Sbjct 5816 GGGTAC----AGA--GGGCAATCCCTGGGACTGAGCCTGAACACAGGGCACTGGATCAAGT-----TCCC---- 5874
Query 1380 CTGTGGAACTTGTGGCAAAGCG 1401
Sbjct 5875 ---------------------- 5874