Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12984
- Subject:
- XM_006538378.3
- Aligned Length:
- 5381
- Identities:
- 1153
- Gaps:
- 4048
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAATGCTGCCGTCGGGCAGCTCCTGGCACACCGCTGCTCGTTCTGGCTTTCCTACTCCTGAGTTCCAGGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCACGCTCAGAGGAAGACCGTGAAGGCCTCTGGGATGCCTGGGGCCCTTGGAGCGAGTGTTCCAGAACCTGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGGGGTGCCTCCTATTCCCTGAGACGCTGCCTGAGCAGCAAGAGCTGTGAAGGGAGAAATATTCGATATAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACATGCAGTAATGTGGACTGCCCACCAGAAGCAGGTGATTTCCGAGCTCAACAGTGTTCTGCTCATAACGACGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAGTACCATGGACAGCTTTATGAATGGCTTCCTGTATCTAATGACCCCGACAATCCATGCTCACTCAAGTGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGCAAAAGGAACCAGCCTGGTTGTGGAACTAGCACCGAAGGTCTTAGATGGTACGCGATGCTATACAGAATCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGGATATGTGCATCAGCGGCCTATGCCAAATTGTTGGCTGTGATCACCAGCTGGGGAGCACTGTCAAAGAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAACTGTGGAGTGTGCAACGGAGATGGCTCAACGTGCCGGCTGGTCCGAGGGCAGTATAAATCTCAGCTCTCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAGTAAATCGGATGACACCGTGGTCGCCATTCCTTACGGCAGCAGACACATCCGCCTTGTCTTAAAAGGGCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATCATTTGTATCTGGAGACCAAGACCCTCCAGGGAACTAAAGGTGAAAATAGTCTGAGCTCTACAGGCATTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTTGTGGACAATTCTACAGTGGACTTCCAGAAACTTCCAGACAAAGAGATACTGAGGATGACTGGGCCACTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGCAGATTTCATCATCAAGATCCATGACTTGGGACCTGCAGACAGCACCGTCCAGTTCATCTTCTACCAGCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCATCCACCGATGGAGGGAAACAGACTTCTTTCCTTGCTCAGCAACGTGTGGTGGAGGCTACCAGCTGACGTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCCGAGTGCTATGATCTACGGAGTAACCGTGTGGTGGCCGACCAGTACTGTCACTACTACCCCGAGAACGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCCCAAACCCAAGCTTCAGGAGTGCAACTTGGATCCTTGTCCAGCCAGTGACGGATACAAGCAGATCATGCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATGACCTCTACCATCCCCTTCCTCGGTGGGAGGCCACCCCGTGGACCGCGTGCTCCTCCTCATGTGGGGGGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATCCAGAGCCGGGCAGTTTCCTGTGTGGAGGAGGACATCCAGGGGCATGTCACTTCAGTGGAAGAGTGGAAAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCATGTACACCCCAAAGATGCCAGTCGTGCAGCCCTGCAACATTTTTGACTGCCCTAAATGGCTGGCACAGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGTCTCCGTGCACAGTGACCTGTGGCCAGGGCCTCAGATACCGCGTGGTACTCTGCATTGACCACCGAGGAAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCACACAGGAGGCTGCAGTGCTAAAACAAAGCCCCACATAAAAGAAGAATGCATCATTCCCACACCGTGCTACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCCCAGAGAGAAACTTCCAATAGAGGCCAAGCTGCCATGGTTCAAGCAAGCCCAGGAGCTAGAGGAAGGAGCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCAGTGTCTGAAGAGCCTTCGTTCATCCCAGAAGCTTGGTCGGCCTGTACTGTCACCTGTGGCGTGGGGACACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTGCGAATAATAAGATGCCAGGTGCTCCTGCCTTTCTCTCAGTCTGTGGCTGACCTGCCTGCGGATGAATGCG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGGGCCTAAGCCAGCATCGCAACGTGCCTGTTATGCGGGACCGTGCAACGGGGAAACTCCGGAATTTAACCCG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GATAACGGAGACGGACTCTTGGGTGGCCTGCAGGACCTGGACGAGCTGTATGACTGGGAATATGAGGGCTTCAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAAGTGCTCTGAGTCATGTGGAGGAGGTGTCCAGGAGGCTGTGGTAAGCTGCCTGAACAAACAGACCCGGGAAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCGCTGATGAGAACCTGTGTGTGACCAGCCGACGGCCCCCGCAGCTCCTGAAATCCTGTAACTTGGATCCCTGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCAGCAAGGTGGGAAATTGGCAAGTGGAGCCCATGTAGCCTCACCTGTGGGGTTGGCCTGCAGACCAGAGATGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGTCTGTTCCCACCTACTCTCCAGAGAGATGAACGAGGTGGTTGTCCTGGCCGATGAGCTGTGCCATCACCCCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AACCCAGCACAGTGCAAGCCTGCAACCGTTTCAATTGCCCCCCAGCCTGGTACCCTGCACAGTGGCAGCTGTGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCCAGGACCTGTGGAGGAGGGATTCAGAAACGTGATGTTCTCTGCAAGCAGCGTATGGCTGACGGCAGCTTCCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGAGCTTCCAGAGACCTTCTGTTCTGCCTCCAAACCAACCTCCCACCAAGGGTGCAAGAAAGATGACTGCCCCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTGAGTGGCTTCTCTCAGAGTGGTCAGAGTGCTCTGTGAGCTGTGGGGAGGGCACCCAGACTCGAAGTGCCATT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGCCAGAGGGTGCTGAAAACTGGGGTCTCCACTGTTGTCAATTCTACTTTGTGCCCTCCCCTGCCCTTCTCTTC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTCCATCAGACCCTGTATGCTGGCAACCTGTGCAAGGCCTGGAAGGCCTTCCACCAAGCACAGTCCTCACATCG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGCTGCACGAAACATATACATCCAGACCCGCAGGCAGAGGAAGCTGCACTTCGTTGTGGGAGGATTTGCTTAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTGCTTCCCAAGACTACCGTGGTGCTCCGGTGTCCCACACGCAGATTCCGCAAGCCCCTCATCACGTGGGAAAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGACGGCCAGCACAGCATCAGCTCGGCTCATGTCACCGTAGCCCCTTTTGGCTACCTGAAGATCCATCGCCTCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AGCCCTCAGATGCGGGCATCTACACCTGTTCTGCGGGGCCCGCCCGGGAGCAGTTTGTGATTAAGCTCATTGGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGCAACCGCAAGCTCGTGGCCAGGCCCCTGAGCCTTTGGAGTGAGGAAGAGGAGGCCCTGCAGGTGAGGAAGAC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAATCCAAAAGAAGCCTTGCAAACCCACAAACACCAAAATGGCATCTTCTCCAACGGCAGCAAAGCTGAGAAGC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCGGCCTCACTGCAGATCCTGGGAACCGCTATGATGACATTGTGTCTAGGCTGTTGGAGCAGGGCGGCTGGCCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGAGAGCTCCTGGCCTCGTGGGAGGTGCAGGACTCTGCAGAAAGGAACGCATCCTCAGAAGAGGATCCCAATGC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGAACAGGCCCTCCTGCATCTCCCCTTCACCATGGTGGCCGAGCAGAAGCGTCTGGATGACATCCTCAGGAACC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGTCCCAGCAGCCAGAGGAGCTACGGGACCTCTACAGCAAGCACCTGGTGGCCCAGCTGGCCCAGGACATCTTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CGAAGCCACCTGGAGAACCAGGATCTGCTTCCTAAGCCCTCTGAGCAGAGGTTTCCTCCCATGGCCGTCCCAGC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TCACAAACATGTCTCTGGCTTCAGCAGCTCCCTAAGGAGCTCATCTGGAGAGGCTGGAGGTGGCTCCCGTAGGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CTCATCGCAAGCCCGCCATCTTGCGGAAGATCTCAGCGGCACAGCAACTCTCAGCCTCGGAGGTAGTCACCCAC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTGGGGCAGACTGTGGCTCTAGCCAGTGGGACCCTGAGTGTGCTTCTGCACTGTGAGGCGGTAGGCAACCCAAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GCCCACCATCCACTGGACCAGGAACGGAGAAGCAGTTCAATTCAGTGACAGGATTCTTCTACAGCCAGATGATT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CCTTACAGATCTTGGCACCAGTGGAAGCTGATGTGGGTTTCTATACTTGCAATGCCACAAATGCCTTGGGATAT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GACTCTGTCTCCATTGCTGTCACATTAGCAGGAAAGCCACTAGTGAAGACATCCCGAATGACTGTGCTCAACAC 3848
Query 1 -----------------------------------------------------------ATGTG---TTTGACT 12
||||| .||.|||
Sbjct 3849 AGAGAAGCCTACAGTCACAGTGGATATCGGTGGCACCGTCAGAACCGTCCGAGGAGTGAATGTGACAATTAACT 3922
Query 13 GATGAGTGGGGTTTTTTGTTTTTTTTTTTCTTCCTAGGAGTGCCTGAAGCTGAAGTCACTTGGTTCAGGAATAA 86
|...||||| .|||.||.|||||||||||||||||.||||||||.|||||
Sbjct 3923 GCCAAGTGG-------------------------CAGGTGTACCTGAAGCTGAAGTCACCTGGTTCAGAAATAA 3971
Query 87 AAGCAAACTGGGCTCC-------------------------CCGCACCATCTGCACGAAGGCTCCTTGCTGCTC 135
|||||||.|||||||| || |||||.|||||.||.|||||||||||||||
Sbjct 3972 AAGCAAATTGGGCTCCTCCCACCACCTGCATGAGGGCTCCTCC-CACCACCTGCATGAGGGCTCCTTGCTGCTC 4044
Query 136 ACAAACGTGTCCTCCTCGGATCAGGGCCTGTACTCCTGCAGGGCGGCCAATCTTCATGGAGAGCTGACTGAGAG 209
|||.|.|||||||.|||.|||||.||||||||.|||||||||||.||||||||.||.|||||.|.|||.|||||
Sbjct 4045 ACAGATGTGTCCTTCTCTGATCAAGGCCTGTATTCCTGCAGGGCAGCCAATCTACACGGAGAACAGACAGAGAG 4118
Query 210 CACCCAGCTGCTGATCCTAGATCCCCCCCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCGCTGCCA 283
|||.|||||.|||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||...||||
Sbjct 4119 CACGCAGCTCCTGATTCTAGATCCCCCGCAAGTCCCCACACAGTTGGAAGACATCAGGGCCTTGCTCTTAGCCA 4192
Query 284 CTGGACCGAACCTTCCTTCAGTGCTGACGTCTCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCTGCT 357
|||||||||||||||||||.|||||.|.|||.||||||||||||||||||||||||||||||||||||||.|||
Sbjct 4193 CTGGACCGAACCTTCCTTCGGTGCTTATGTCCCCTCTGGGAACACAGCTGGTCCTGGATCCTGGGAATTCCGCT 4266
Query 358 CTCCTTGGCTGCCCCATCAAAGGTCACCCTGTCCCTAATATCACCTGGTTTCATGGTGGTCAGCCAATTGTCAC 431
|||||||||||||||||||||||||||||...|||.||||||||||||||.||...|||.||||||||||.|||
Sbjct 4267 CTCCTTGGCTGCCCCATCAAAGGTCACCCCACCCCCAATATCACCTGGTTCCAAAATGGCCAGCCAATTGCCAC 4340
Query 432 TGCCACAGGACTGACGCATCACATCTTGGCAGCTGGACAGATCCTTCAAGTTGCAAACCTTAGCGGTGGGTCTC 505
||||.|.||.|||||.||.|||||||.||.|||||||||||||||.|.|||||||||.||.||.||.||..|||
Sbjct 4341 TGCCCCGGGGCTGACCCACCACATCTGGGGAGCTGGACAGATCCTACGAGTTGCAAATCTCAGTGGAGGACCTC 4414
Query 506 AAGGGGAATTCAGCTGCCTTGCCCAGAATGAGGCAGGGGTGCTCATGCAGAAGGCATCTTTAGTGATCCAAGAT 579
|||||||.|||||||||||.||.||||||||.||||||...|||.|||||||.||.|||||.||||||||||||
Sbjct 4415 AAGGGGAGTTCAGCTGCCTGGCTCAGAATGAAGCAGGGACCCTCCTGCAGAAAGCCTCTTTGGTGATCCAAGAT 4488
Query 580 TACTGGTGGTCTGTGGACAGACTGGCAACCTGCTCAGCCTCCTGTGGTAACCGGGGGGTTCAGCAGCCCCGCTT 653
|||||||||||||||||.|||||||||||||||||.||.||.||||||||..|.||..||||.|||||.||..|
Sbjct 4489 TACTGGTGGTCTGTGGATAGACTGGCAACCTGCTCCGCATCTTGTGGTAATAGAGGCATTCATCAGCCGCGACT 4562
Query 654 GAGGTGCCTGCTGAACAGCACGGAGGTCAACCCTGCCCACTGCGCAGGGAAGGTTCGCCCTGCGGTGCAGCCCA 727
.|||||..|.|||||||.||||||.||..||||||..|||||..||||.|||..|||.||.||.||||||||..
Sbjct 4563 CAGGTGTTTACTGAACACCACGGAAGTTGACCCTGAGCACTGTACAGGAAAGCCTCGGCCCGCCGTGCAGCCTG 4636
Query 728 TCGCGTGCAACCGGAGAGACTGCCCTTCTCGGTGGATGGTGACCTCCTGGTCTGCCTGTACCCGGAGCTGTGGG 801
|.||.|||||||||||||||||.||||||||.|||||||||||.||||||||.||||||||||||||.||.||.
Sbjct 4637 TTGCCTGCAACCGGAGAGACTGTCCTTCTCGATGGATGGTGACGTCCTGGTCCGCCTGTACCCGGAGTTGCGGT 4710
Query 802 GGAGGTGTCCAGACCCGCAGGGTGACCTGTCAAAAGCTGAAAGCCTCTGGGATCTCCACCCCTGTGTCCAATGA 875
||||||||.||.|||||.||||||||||||||.|||.|||||||.|||||.||.||.|||||.|||||||||||
Sbjct 4711 GGAGGTGTACAAACCCGAAGGGTGACCTGTCAGAAGTTGAAAGCTTCTGGTATTTCTACCCCGGTGTCCAATGA 4784
Query 876 CATGTGCACCCAGGTCGCCAAGCGGCCTGTGGACACCCAGGCCTGTAACCAGCAGCTGTGTGTGGAGTGGGCCT 949
||||||||..||..|.|||||.|||||||||||||||||||||||.|||||||||||.||||||||.|||||||
Sbjct 4785 CATGTGCAGTCAACTGGCCAAACGGCCTGTGGACACCCAGGCCTGCAACCAGCAGCTCTGTGTGGAATGGGCCT 4858
Query 950 TCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATCGGGCCTCACCTAGCTGTGCAACACAGACAAGTCTTCTGC 1023
||||||||||||||||||||||||||||||||||.||.||||.|||.||||||||.|||||.||.|||||||||
Sbjct 4859 TCTCCAGCTGGGGCCAGTGCAATGGGCCTTGCATAGGCCCTCGCCTTGCTGTGCAGCACAGGCAGGTCTTCTGC 4932
Query 1024 CAGACACGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCTCTTCCGAGGCCTGTGAGCACCCAGAACTG 1097
|||||.||||||||||||||||||||||||||||||||||||||.||.||.|||||.|||||||||||.|||||
Sbjct 4933 CAGACCCGGGATGGCATCACCTTACCATCAGAGCAGTGCAGTGCCCTCCCCAGGCCCGTGAGCACCCAAAACTG 5006
Query 1098 CTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTGTGGACCCTGTGCACAGCTACCTGTGGCAACTACG 1171
|||||||||||||||||||||||||||||||||||||||.||||||||.|||||.||.||||||||||||||.|
Sbjct 5007 CTGGTCAGAGGCCTGCAGTGTACACTGGAGAGTCAGCCTCTGGACCCTATGCACGGCAACCTGTGGCAACTATG 5080
Query 1172 GCTTCCAGTCCCGGCGTGTGGAGTGTGTGCATGCCCGCACCAACAAGGCAGTGCCTGAGCACCTGTGCTCCTGG 1245
||||||||||||||||.|||||||||||.||.|..||||||||||||||.|||||.|||||||||||.||||||
Sbjct 5081 GCTTCCAGTCCCGGCGGGTGGAGTGTGTTCACGTGCGCACCAACAAGGCTGTGCCCGAGCACCTGTGTTCCTGG 5154
Query 1246 GGGCCCCGGCCTGCCAACTGGCAGCGCTGCAACATCACCCCATGTGAAAACATGGAGTGC-------------A 1306
|||||||||||.|||||||||||.|||||||||.||||.|||||||||||| |||.| |
Sbjct 5155 GGGCCCCGGCCCGCCAACTGGCAACGCTGCAACGTCACTCCATGTGAAAAC----AGTACGTTCCAATCCCAAA 5224
Query 1307 GAGACA--------------------CCACCAGGTACTGCGAGAAGGTGAAACAGCTGAAACTCTGCC--AACT 1358
|| ||| |||.|.||||| ||| |.|.||...|||..|||..||| |||.
Sbjct 5225 GA-ACATTCTGCAAATTCCCTACAGGCCATCGGGTAC----AGA--GGGCAATCCCTGGGACTGAGCCTGAACA 5291
Query 1359 CAG----------CCAGTTTAAATCTCGCTGCTGTGGAACTTGTGGCAAAGCG 1401
||| |.||| ||.|
Sbjct 5292 CAGGGCACTGGATCAAGT-----TCCC-------------------------- 5313