Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13287
Subject:
XM_011533431.2
Aligned Length:
3045
Identities:
2087
Gaps:
954

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCGGACTAACTTAACATTTGATGATTCCACACTGCATGGCCCGATTTTTATTCAAGAACCAAGTCCTGTAAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTTCCCTTTGGATTCTGAGGAGAAAAAAGTGAAGCTCAATTGTGAAGTTAAAGGAAATCCAAAACCTCATATCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGTGGAAGTTAAATGGAACAGATGTTGACACTGGTATGGATTTCCGCTACAGTGTTGTTGAAGGGAGCTTGTTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATCAATAACCCCAATAAAACCCAAGATGCTGGAACGTACCAGTGCACAGCGACAAACTCGTTTGGAACAATTGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TAGCAGAGAAGCAAAGCTTCAGTTTGCTTATCTTGACAACTTTAAAACAAGAACAAGAAGCACTGTGTCTGTCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTCGAGGTCAAGGAATGGTGCTACTGTGTGGCCCGCCACCCCATTCTGGAGAGCTGAGTTATGCCTGGATCTTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AATGAATACCCTTCCTATCAGGATAATCGCCGCTTTGTTTCTCAAGAGACTGGGAATCTGTATATTGCCAAAGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAAAAATCAGATGTTGGGAATTATACCTGTGTGGTTACCAATACCGTGACAAACCACAAGGTCCTGGGGCCAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTACACCACTAATATTGAGAAATGATGGAGTGATGGGTGAATATGAGCCCAAAATAGAAGTGCAGTTCCCAGAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACAGTTCCGACTGCAAAAGGAGCAACGGTGAAGCTGGAATGCTTTGCTTTAGGAAATCCAGTACCAACTATTAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTGGCGAAGAGCTGATGGAAAGCCAATAGCAAGGAAAGCCAGAAGACACAAGTCAAATGGAATTCTTGAGATCC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTAATTTTCAGCAGGAGGATGCTGGTTTATATGAATGTGTAGCTGAAAATTCCAGAGGGAAAAATGTAGCAAGG  888

Query    1  ---------------------------------------------------------------ATGGAAGAAAA  11
                                                                           |||||||||||
Sbjct  889  GGACAGCTAACTTTCTATGCTCAACCTAATTGGATTCAAAAAATAAATGATATTCACGTGGCCATGGAAGAAAA  962

Query   12  TGTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAGCCTACATACAAGTGGCTAAAAAATGGCGAACCTCTGC  85
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAGCCTACATACAAGTGGCTAAAAAATGGCGAACCTCTGC  1036

Query   86  TAACTCGGGATAGAATTCAAATTGAGCAAGGAACACTCAACATAACAATAGTGAACCTCTCAGATGCTGGCATG  159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TAACTCGGGATAGAATTCAAATTGAGCAAGGAACACTCAACATAACAATAGTGAACCTCTCAGATGCTGGCATG  1110

Query  160  TATCAGTGTTTGGCAGAGAATAAACATGGAGTTATCTTTTCCAACGCAGAGCTTAGTGTTATAGCTGTAGGTCC  233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TATCAGTGTTTGGCAGAGAATAAACATGGAGTTATCTTTTCCAACGCAGAGCTTAGTGTTATAGCTGTAGGTCC  1184

Query  234  AGATTTTTCAAGAACACTCTTGAAAAGAGTAACTCTTGTCAAAGTGGGAGGTGAAGTTGTCATTGAGTGTAAGC  307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGATTTTTCAAGAACACTCTTGAAAAGAGTAACTCTTGTCAAAGTGGGAGGTGAAGTTGTCATTGAGTGTAAGC  1258

Query  308  CAAAAGCGTCTCCAAAACCTGTTTACACCTGGAAGAAAGGAAGGGATATATTAAAAGAAAATGAAAGAATTACC  381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CAAAAGCGTCTCCAAAACCTGTTTACACCTGGAAGAAAGGAAGGGATATATTAAAAGAAAATGAAAGAATTACC  1332

Query  382  ATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGGGAGTTATACCTGTATAGCCAC  455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTAAATCAGACGCTGGGAGTTATACCTGTATAGCCAC  1406

Query  456  TAACCATTTTGGAACTGCTAGCAGTACTGGAAACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTACCCCCTT  529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TAACCATTTTGGAACTGCTAGCAGTACTGGAAACTTGGTAGTGAAAGATCCAACAAGGGTAATGGTACCCCCTT  1480

Query  530  CCAGTATGGATGTCACTGTTGGAGAGAGTATTGTTTTACCGTGCCAGGTAACGCATGATCACTCGCTAGACATC  603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCAGTATGGATGTCACTGTTGGAGAGAGTATTGTTTTACCGTGCCAGGTAACGCATGATCACTCGCTAGACATC  1554

Query  604  GTGTTTACTTGGTCATTTAATGGACACCTGATAGACTTTGACAGAGATGGGGACCACTTTGAAAGAGTTGGAGG  677
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GTGTTTACTTGGTCATTTAATGGACACCTGATAGACTTTGACAGAGATGGGGACCACTTTGAAAGAGTTGGAGG  1628

Query  678  ---GGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGGGAAATATGTCTGCATGGTCC  748
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GCAGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTGAAGCATGCTGGGAAATATGTCTGCATGGTCC  1702

Query  749  AAACAAGTGTGGACAGGCTATCTGCTGCTGCAGACCTGATTGTAAGAGGTCCTCCAGGTCCCCCAGAGGCTGTG  822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AAACAAGTGTGGACAGGCTATCTGCTGCTGCAGACCTGATTGTAAGAGGTCCTCCAGGTCCCCCAGAGGCTGTG  1776

Query  823  ACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGAGACCCGGGCCTGACAATCACAGCCCCATCAC  896
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1777  ACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGAGACCCGGGCCTGACAACCACAGCCCCATCAC  1850

Query  897  CATGTATGTCATTCAAGCCAGGACTCCGTTCTCCGTGGGCTGGCAAGCAGTCAGTACAGTCCCAGAACTCATTG  970
            |||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CATGTATGTCATTCAAGCCAGGACTCCATTCTCCGTGGGCTGGCAAGCAGTCAGTACAGTCCCAGAACTCATTG  1924

Query  971  ATGGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCTTGGGTTGAATATGAATTCCGCACAGTTGCAGCC  1044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  ATGGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCTTGGGTTGAATATGAATTCCGCACAGTTGCAGCC  1998

Query 1045  AACGTGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGAAACGGAGAACAGAAGAAGCTCTCCCCGAAGTCAC  1118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  AACGTGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGAAACGGAGAACAGAAGAAGCTCTCCCCGAAGTCAC  2072

Query 1119  ACCAGCGAATGTCAGTGGTGGCGGAGGCAGCAAATCTGAACTGGTTATAACCTGGGAGACGGTCCCTGAGGAAT  1192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  ACCAGCGAATGTCAGTGGTGGCGGAGGCAGCAAATCTGAACTGGTTATAACCTGGGAGACGGTCCCTGAGGAAT  2146

Query 1193  TACAGAATGGTCGTGGCTTTGGTTATGTGGTGGCCTTCCGGCCCTACGGTAAAATGATCTGGATGCTGACAGTG  1266
            |||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  TACAGAATGGTCGAGGCTTTGGTTATGTGGTGGCCTTCCGGCCCTACGGTAAAATGATCTGGATGCTGACAGTG  2220

Query 1267  CTGGCCTCAGCTGACGCCTCTAGATACGTGTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTTTGAGGTTAA  1340
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  CTGGCCTCAGCTGATGCCTCTAGATACGTGTTCAGGAATGAGAGCGTGCACCCCTTCTCTCCCTTTGAGGTTAA  2294

Query 1341  AGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTTCAGTCCCACCACGGTGGTGTATTCTGCAGAAGAAGAAC  1414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTTCAGTCCCACCACGGTGGTGTATTCTGCAGAAGAAGAAC  2368

Query 1415  CCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTTTCTGGGCCTCCCCA  1488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  CCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGCCACAGATATTGAAGTTTTCTGGGCCTCCCCA  2442

Query 1489  CTGGAGAAGAATAGAGGACGAATACAAGGTTATGAGGTTAAATATTGGAGACATGAAGACAAAGAAGAAAATGC  1562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  CTGGAGAAGAATAGAGGACGAATACAAGGTTATGAGGTTAAATATTGGAGACATGAAGACAAAGAAGAAAATGC  2516

Query 1563  TAGAAAAATACGAACAGTTGGAAATCAGACATCAACAAAAATCACGAACTTAAAAGGCAGTGTGCTGTATCACT  1636
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  TAGAAAAATACGAACAGTTGGAAATCAGACATCAACAAAAATCACGAACTTAAAAGGCAGTGTGCTGTATCACT  2590

Query 1637  TAGCTGTCAAGGCATATAATTCTGCTGGGACAGGCCCCTCTAGTGCAACAGTCAATGTGACAACCCGAAAGCCA  1710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  TAGCTGTCAAGGCATATAATTCTGCTGGGACAGGCCCCTCTAGTGCAACAGTCAATGTGACAACCCGAAAGCCA  2664

Query 1711  CCACCAAGTCAACCCCCCGGAAACATCATATGGAATTCATCAGACTCCAAAATTATCCTGAATTGGGATCAAGT  1784
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  CCACCAAGTCAACCCCCCGGAAACATCATATGGAATTCATCAGACTCCAAAATTATCCTGAATTGGGATCAAGT  2738

Query 1785  GAAGGCCCTGGATAATGAGTCGGAAGTAAAAGGATACAAAGTCTTGTACAGATGGAACAGACAAAGCAGCACAT  1858
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  GAAGGCCCTGGATAATGAGTCGGAAGTAAAAGGATACAAAGTCTTGTACAGATGGAACAGACAAAGCAGCACAT  2812

Query 1859  CTGTCATTGAAACAAATAAAACATCGGTGGAGCTTTCTTTGCCTTTCGATGAAGATTATATAATAGAAATTAAG  1932
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813  CTGTCATTGAAACAAATAAAACATCGGTGGAGCTTTCTTTGCCTTTCGATGAAGATTATATAATAGAAATTAAG  2886

Query 1933  CCATTCAGCGACGGAGGAGATGGCAGCAGCAGTGAACAAATTCGAATTCCAAAGATATCAAATGCCTACGCGAG  2006
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887  CCATTCAGCGACGGAGGAGATGGCAGCAGCAGTGAACAAATTCGAATTCCAAAGATATCAAATGCCTACGCGAG  2960

Query 2007  AGGATCTGGGGCTTCCACTTCGAATGCATGTACGCTGTCAGCCATCAGTACAATAATGATTTCCCTCACAGCTA  2080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961  AGGATCTGGGGCTTCCACTTCGAATGCATGTACGCTGTCAGCCATCAGTACAATAATGATTTCCCTCACAGCTA  3034

Query 2081  GGTCCAGTTTA  2091
            |||||||||||
Sbjct 3035  GGTCCAGTTTA  3045

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