Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13287
Subject:
XM_017321598.1
Aligned Length:
3077
Identities:
1889
Gaps:
988

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAGGTTGCCATGGGAACTGCTAGTGCTGCAATCATTCATGTTGTGCCTTGCAGATGACTACACACTGCATGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCAGTTTTTGTTCAAGAACCAAGTCATGTCATGTTTCCTTTGGATTCTGAGGAGAAAAAAGTGAAACTCAGTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGAAGTTAAAGGGAATCCAAAACCTCACATCAGGTGGAAGATAAATGGAACAGATGTTGACATTGGTATGGAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTCCGCTACAGTGTTGTTGACGGCAGCTTGTTGATCAATAACCCCAATAAAACCCAAGATGCTGGAACGTACCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTGCATAGCAACAAACTCATTTGGAACAATTGTAAGCAGAGAAGCAAAGCTTCAGTTTGCTTATCTTGAAAACT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTAAGACAAGAACAAGAAGCACTGTGTCAGTCCGTCGAGGTCAGGGAATGGTCCTTCTGTGCGGCCCGCCACCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CATTCTGGAGAGCTGAGCTATGCCTGGATCTTCAATGAATACCCTTCCTATCAGGATAACCGCCGCTTCGTTTC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCAAGAGACTGGGAATCTGTATATTGCCAAAGTGGAAAAATCTGATGTTGGTAATTACACCTGTGTAGTTACCA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ACACTGTGACCAACCACAAGGTCCTGGGACCGCCCACACCACTAATCCTGAGAAATGATGGGGTGATGGGTGAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TATGAGCCCAAAATAGAAGTACAGTTTCCAGAAACCGTCCCGGCTGAGAAAGGAACAACAGTCAAACTGGAATG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTTTGCCTTAGGAAATCCAGTCCCAACTATTCTATGGCGAAGAGCTGATGGCAAGCCAATAGCAAGGAAAGCCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAAGACATAAGTCGAATGGAATTCTGGAAATTCCCAATTTTCAGCAGGAAGATGCCGGTTCATATGAATGTGTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCTGAAAACTCCAGAGGCAAAAACGTAGCCAAGGGACAGTTGACTTTTTATGCTCAACCTAACTGGGTTCAAAT  962

Query    1  ----------------------ATGGAAGAAAATGTCTTTTGGGAATGTAAAGCAAATGGAAGGCCTAAGCCTA  52
                                  ||||||||.|.||||||.||||||||||||||||||||.||||||||.||||
Sbjct  963  AATAAATGATATCCACGTGGCCATGGAAGAGAGTGTCTTCTGGGAATGTAAAGCAAATGGGAGGCCTAAACCTA  1036

Query   53  CATACAAGTGGCTAAAAAATGGCGAACCTCTGCTAACTCGGGATAGAATTCAAATTGAGCAAGGAACACTCAAC  126
            |.||||..||||||||||||||.||.||.|||.||||.|||||||||||.|||||.||||||||||||||||||
Sbjct 1037  CCTACAGATGGCTAAAAAATGGTGACCCACTGTTAACACGGGATAGAATACAAATCGAGCAAGGAACACTCAAC  1110

Query  127  ATAACAATAGTGAACCTCTCAGATGCTGGCATGTATCAGTGTTTGGCAGAGAATAAACATGGAGTTATCTTTTC  200
            ||||||||||||||.||||||||||||||||||||.||||||.|||||||.|||||||||||||||||||||||
Sbjct 1111  ATAACAATAGTGAATCTCTCAGATGCTGGCATGTACCAGTGTGTGGCAGAAAATAAACATGGAGTTATCTTTTC  1184

Query  201  CAACGCAGAGCTTAGTGTTATAGCTGTAGGTCCAGATTTTTCAAGAACACTCTTGAAAAGAGTAACTCTTGTCA  274
            ||.|||.|||||||||||.|||||||.|.|||||||||||||..||||||||||.|||||||||||.|||||||
Sbjct 1185  CAGCGCTGAGCTTAGTGTAATAGCTGAAAGTCCAGATTTTTCCCGAACACTCTTAAAAAGAGTAACACTTGTCA  1258

Query  275  AAGTGGGAGGTGAAGTTGTCATTGAGTGTAAGCCAAAAGCGTCTCCAAAACCTGTTTACACCTGGAAGAAA-GG  347
            ||||||||||||||||||||||||||||.|||||||||||.||.||||.||||||.||||||||| ||||| ||
Sbjct 1259  AAGTGGGAGGTGAAGTTGTCATTGAGTGCAAGCCAAAAGCATCCCCAAGACCTGTCTACACCTGG-AGAAAGGG  1331

Query  348  AAGGGATATATTAAAAGAAAATGAAAGAATTACCATTTCTGAAGATGGAAACCTCAGAATCATCAACGTTACTA  421
            |||.||.|||||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||.||.||||
Sbjct 1332  AAGAGAAATATTAAGAGAAAATGAAAGAATTACCATTTCTGAAGATGGGAACCTCAGAATCATCAATGTGACTA  1405

Query  422  AATCAGACGCTGGGAGTTATACCTGTATAGCCACTAACCATTTTGGAACTGCTAGCAGTACTGGAAACTTGGTA  495
            ||||.||.|||||.|||||.|||||.||||||||.|||||||||||||||||.|||||||||||.||..||.|.
Sbjct 1406  AATCTGATGCTGGAAGTTACACCTGCATAGCCACGAACCATTTTGGAACTGCCAGCAGTACTGGGAATGTGATT  1479

Query  496  GTGAAAGATCCAACAAGGGTAATGGTACCCCCTTCCAGTATGGATGTCACTGTTGGAGAGAGTATTGTTTTACC  569
            ||||||||.|||||||.|||.|||||.||.||||||||.||||||||||||||.|||||.||.||||||.|.||
Sbjct 1480  GTGAAAGACCCAACAAAGGTGATGGTTCCTCCTTCCAGCATGGATGTCACTGTAGGAGAAAGCATTGTTCTTCC  1553

Query  570  GTGCCAGGTAACGCATGATCACTCGCTAGACATCGTGTTTACTTGGTCATTTAATGGACACCTGATAGACTTTG  643
            .|||||||||||.|||||||||||.||.|||||.||||||||.|||.||||||||||||||.||||||||||||
Sbjct 1554  ATGCCAGGTAACACATGATCACTCCCTGGACATTGTGTTTACGTGGACATTTAATGGACACTTGATAGACTTTG  1627

Query  644  ACAGAGATGGGGACCACTTTGAAAGAGTTGGAGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTG  717
            |||..|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628  ACAAGGATGGAGACCACTTTGAAAGAGTTGGAGGGGATTCAGCTGGTGATTTGATGATCCGAAACATCCAACTG  1701

Query  718  AAGCATGCTGGGAAATATGTCTGCATGGTCCAAACAAGTGTGGACAGGCTATCTGCTGCTGCAGACCTGATTGT  791
            ||||||||||||||.||||||||||||||||||||||||||.||||..||.||||.||||||.|||||||||||
Sbjct 1702  AAGCATGCTGGGAAGTATGTCTGCATGGTCCAAACAAGTGTAGACAAACTCTCTGTTGCTGCGGACCTGATTGT  1775

Query  792  AAGAGGTCCTCCAGGTCCCCCAGAGGCTGTGACAATAGACGAAATCACAGATACCACTGCTCAGCTCTCCTGGA  865
            ||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.||||||||||||||.||.||||
Sbjct 1776  AAGAGGTCCTCCAGGTCCTCCTGAGGCTGTGACCATAGATGAAATCACAGACACCACTGCTCAGCTTTCTTGGA  1849

Query  866  GACCCGGGCCTGACAATCACAGCCCCATCACCATGTATGTCATTCAAGCCAGGACTCCGTTCTCCGTGGGCTGG  939
            ||||.||.||||||||.|||||||||||||||||||||||.||.|||||.||||||||.|||||||||||||||
Sbjct 1850  GACCAGGACCTGACAACCACAGCCCCATCACCATGTATGTTATCCAAGCTAGGACTCCATTCTCCGTGGGCTGG  1923

Query  940  CAAGCAGTCAGTACAGTCCCAGAACTCATTGATGGGAAGACATTCACAGCGACCGTGGTGGGTTTGAACCCTTG  1013
            ||||||||||.||||||.|||||.|||.|.||.|||||||||||||||||.||.||||||||||||||.|||||
Sbjct 1924  CAAGCAGTCAATACAGTTCCAGATCTCGTCGACGGGAAGACATTCACAGCAACTGTGGTGGGTTTGAATCCTTG  1997

Query 1014  GGTTGAATATGAATTCCGCACAGTTGCAGCCAACGTGATTGGGATTGGGGAGCCCAGCCGCCCCTCAGAGAAAC  1087
            |||||||||||||||||||||.||||||||.||.||||||||.||||||||.||||||||.|||||||||||||
Sbjct 1998  GGTTGAATATGAATTCCGCACTGTTGCAGCTAATGTGATTGGCATTGGGGAACCCAGCCGGCCCTCAGAGAAAC  2071

Query 1088  GGAGAACAGAAGAAGCTCTCCCCGAAGTCACACCAGCGAATGTCAGTGGTGGCGGAGGCAGCAAATCTGAACTG  1161
            ||||.||||||||.||||||||.||||||||.||.||.||.|||||||||||.|||||||||||||||||||||
Sbjct 2072  GGAGGACAGAAGAGGCTCTCCCTGAAGTCACCCCGGCTAACGTCAGTGGTGGTGGAGGCAGCAAATCTGAACTG  2145

Query 1162  GTTATAACCTGGGAGACGGTCCCTGAGGAATTACAGAATGGTCGTGGCTTTGGTTATGTGGTGGCCTTCCGGCC  1235
            |||||||||||||||||.|||||||||||||||||||||||..|.|||||||||||.|||||.|||||||||||
Sbjct 2146  GTTATAACCTGGGAGACAGTCCCTGAGGAATTACAGAATGGCAGAGGCTTTGGTTACGTGGTTGCCTTCCGGCC  2219

Query 1236  CTACGGTAAAATGATCTGGATGCTGACAGTGCTGGCCTCAGCTGACGCCTCTAGATACGTGTTCAGGAATGAGA  1309
            ..|.||.||||||||||||||||||||.||||||||.||||||||.|||||.||||||||||||||||||||||
Sbjct 2220  ACATGGCAAAATGATCTGGATGCTGACCGTGCTGGCTTCAGCTGATGCCTCCAGATACGTGTTCAGGAATGAGA  2293

Query 1310  GCGTGCACCCCTTCTCTCCCTTTGAGGTTAAAGTAGGTGTCTTCAACAACAAAGGAGAAGGCCCTTTCAGTCCC  1383
            |.||||..||.|||||||||||||||||||||||.|||||||||||.||||||||.||||||||||||||||||
Sbjct 2294  GTGTGCGTCCATTCTCTCCCTTTGAGGTTAAAGTGGGTGTCTTCAATAACAAAGGGGAAGGCCCTTTCAGTCCC  2367

Query 1384  ACCACGGTGGTGTATTCTGCAGAAGAAGAACCCACCAAACCACCAGCCAGTATCTTTGCCAGAAGTCTTTCTGC  1457
            ||||||.|||||||||||||.|||||||||||||||||.|||||||||||||||||||||||.|||||||||||
Sbjct 2368  ACCACGCTGGTGTATTCTGCTGAAGAAGAACCCACCAAGCCACCAGCCAGTATCTTTGCCAGGAGTCTTTCTGC  2441

Query 1458  CACAGATATTGAAGTTTTCTGGGCCTCCCC-ACTGGAGAAGAATAGAGGACGAATACAAGGTTATGAGGTTAAA  1530
            |||.|||||.|||||||||||||||||||| |.|||| |||||.||||||||.||.||||||||||||||.|||
Sbjct 2442  CACGGATATCGAAGTTTTCTGGGCCTCCCCTATTGGA-AAGAACAGAGGACGGATTCAAGGTTATGAGGTAAAA  2514

Query 1531  TATTGGAGACATGAAGACAAAGAAGAAAATGCTAGAAAAATACGAACAGTTGGAAATCAGACATCAACAAAAAT  1604
            ||||||||||||||.|||||.|||||||||||||.|||.||||||||||||||||||||||||||.||||||||
Sbjct 2515  TATTGGAGACATGATGACAAGGAAGAAAATGCTAAAAAGATACGAACAGTTGGAAATCAGACATCCACAAAAAT  2588

Query 1605  CACGAACTTAAAAGGCAGTGTGCTGTATCACTTAGCTGTCAAGGCATATAATTCTGCTGGGACAGGCCCCTCTA  1678
            |||.|||||.|||||.||||..||||||||||||.||||||||||.|||||.||.|||||||||||.|||||.|
Sbjct 2589  CACCAACTTGAAAGGAAGTGCTCTGTATCACTTATCTGTCAAGGCGTATAACTCAGCTGGGACAGGACCCTCCA  2662

Query 1679  GTGCAACAGTCAATGTGACAACCCGAAAGCCACCACCAAGTCAACCCCCCGGAAACATCATATGGAATTCATCA  1752
            ||||||||||||||||.||.|||.||||||||||||||||.||||||||.|||||||||||||||||||||||.
Sbjct 2663  GTGCAACAGTCAATGTCACGACCAGAAAGCCACCACCAAGCCAACCCCCTGGAAACATCATATGGAATTCATCG  2736

Query 1753  GACTCCAAAATTATCCTGAATTGGGATCAAGTGAAGGCCCTGGATAATGAGTCGGAAGTAAAAGGATACAAAGT  1826
            ||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 2737  GACTCCAAAATTATCCTGAACTGGGATCAAGTGAAGGCCCTGGATAATGAGTCAGAAGTAAAAGGATACAAAGT  2810

Query 1827  CTTGTACAGATGGAACAGACAAAGCAGCACATCTGTCATTGAAACAAATAAAACATCGGTGGAGCTTTCTTTGC  1900
            ||||||||||||||||||.||||||||||||||||||||||||||.||.||.|||||.|||||||||||.||.|
Sbjct 2811  CTTGTACAGATGGAACAGGCAAAGCAGCACATCTGTCATTGAAACCAACAAGACATCAGTGGAGCTTTCATTAC  2884

Query 1901  CTTTCGATGAAGATTATATAATAGAAATTAAGCCATTCAGCGACGGAGGAGATGGCAGCAGCAGTGAACAAATT  1974
            ||||||||||||||||.||.|||||.||.|||||||||||.||.|||||||||||||||||||||||.|||||.
Sbjct 2885  CTTTCGATGAAGATTACATCATAGAGATCAAGCCATTCAGTGATGGAGGAGATGGCAGCAGCAGTGAGCAAATC  2958

Query 1975  CGAATTCCAAAGATATCAAATGCCTACGCGAGAGGATCTGGGGCTTCCACTTCGAATGCATGTACGCTGTCAGC  2048
            |||||.|||||||||||||||.||||.||.||||||||.||||||||.||.||.|||||.||||||||||||||
Sbjct 2959  CGAATCCCAAAGATATCAAATTCCTATGCAAGAGGATCGGGGGCTTCTACCTCCAATGCGTGTACGCTGTCAGC  3032

Query 2049  CATCAGTACAATAATGATTTCCCTCACAGCTAGGTCCAGTTTA  2091
            |||||||||||||||||||||.||||||||.|||||.||||||
Sbjct 3033  CATCAGTACAATAATGATTTCTCTCACAGCCAGGTCTAGTTTA  3075

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