Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13621
Subject:
XM_017006323.1
Aligned Length:
1836
Identities:
1303
Gaps:
528

Alignment

Query    1  ATGTCTGAGATACCGTCCACTATAGTCTCCAAGAACATGACCAATGACAAGAACAGCCTGGAATCCATGAACAT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTCTGAGATACCGTCCACTATAGTCTCCAAGAACATGACCAATGACAAGAACAGCCTGGAATCCATGAACAT  74

Query   75  CAGCTCTTCTTCAAGCACTGAAGAGAACCCAAAGAAACAGGCAAGAAAAAACGAAGAACATGGTCCTGACCCTT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCTCTTCTTCAAGCACTGAAGAGAACCCAAAGAAACAGGCAAGAAAAAACGAAGAACATGGTCCTGACCCTT  148

Query  149  CAGCGAACCCTTTCCACTTATCTGGGGATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGCTCTC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CAGCGAACCCTTTCCACTTATCTGGGGATGTGGATTTCTTCTTGCTCAGAGATCAGGAGCGGAATAAGGCTCTC  222

Query  223  TCCGAACGGCAGCAGCAGAAGACGATGCGGGTGCACCAGAAGATGACCTACTCCTCGAAAGTGTCGGCTAAGCA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCCGAACGGCAGCAGCAGAAGACGATGCGGGTGCACCAGAAGATGACCTACTCCTCGAAAGTGTCGGCTAAGCA  296

Query  297  CACCAGCCTGCGGCGGCAGCTGCAGCTGGAGGACAAGCAGGAGGACCTGGAGGCGCGCGCCGAGGCCGAGCATC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CACCAGCCTGCGGCGGCAGCTGCAGCTGGAGGACAAGCAGGAGGACCTGGAGGCGCGCGCCGAGGCCGAGCATC  370

Query  371  AGCGCGCCTTCCGCGACTACACGACCTGGAAGCTCACCTTGACCAAAGCAGAAAAGAATGTGGAGCCTGAGAAC  444
            ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct  371  AGCGCGCCTTCCGCGACTACACGACCTGGAAGCTCACCTTGACCAA---AGAAAAGAATGTGGAGCCTGAGAAC  441

Query  445  ATGAGTGGCTACATTAAGCAGAAGCGGCAAATGTTCCTCCTCCAGTATGCCCTGGATGTCAAGCGGAGAGAGAT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  442  ATGAGTGGCTACATTAAGCAGAAGCGGCAAATGTTCCTCCTCCAGTATGCCCTGGATGTCAAGCGGAGAGAGAT  515

Query  519  CCAGCGGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGCTGGAGCGGGCCGAGAAATCCCTGGAGAAGGACG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  516  CCAGCGGCTGGAGACGCTGGCGACCAAAGAGGAGGCCAGGCTGGAGCGGGCCGAGAAATCCCTGGAGAAGGACG  589

Query  593  CCGCCTTGTTCGACGAGTTCGTCAGGGAGAATGACTGCAGCTCCGTGCAGGCCATGAGAGCGGCTGAGAAGGAG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  590  CCGCCTTGTTCGACGAGTTCGTCAGGGAGAATGACTGCAGCTCCGTGCAGGCCATGAGAGCGGCTGAGAAGGAG  663

Query  667  ACCAAAGCCAAGATAGAGAAGATCCTTGAGATCCGGGACCTCACCACCCAGATTGTTAATATCAAAAGTGAGAT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  664  ACCAAAGCCAAGATAGAGAAGATCCTTGAGATCCGGGACCTCACCACCCAGATTGTTAATATCAAAAGTGAGAT  737

Query  741  CTCCAGATTTGAAGACACTCTGAAGCATTACAAGGTCTATAAGGATTTCCTATACAAGCTGTCGCCCAAGGAGT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  738  CTCCAGATTTGAAGACACTCTGAAGCATTACAAGGTCTATAAGGATTTCCTATACAAGCTGTCGCCCAAGGAGT  811

Query  815  GGCTTGAAGAACAGGAAAAGAAACACTCGTTTCTCAAAAAGGCCAAGGAGGTCTCCGAGGCTTCCAAAGAGAGC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  812  GGCTTGAAGAACAGGAAAAGAAACACTCGTTTCTCAAAAAGGCCAAGGAGGTCTCCGAGGCTTCCAAAGAGAGC  885

Query  889  AGTGTTAACTCCACACCAGGGGACAAAGGACCAGGGATCAAGGGCAAGGCGAGCTCCATGTGGGCCAAAGAGGG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct  886  AGTGTTAACTCCACACCAGGGGACAAAGGACCAGGGATCAAGGGCAAGGCGAGCTCCATGTGGGCCAA------  953

Query  963  TCAGGGTACAAAGAAGCCCTGGAGGTTTCTGCAGACGATGCGGCTGGGGCGGAGCCCGTCTTACCTGAGCAGCC  1036
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  954  --AGGGTACAAAGAAGCCCTGGAGGTTTCTGCAGACGATGCGGCTGGGGCGGAGCCCGTCTTACCTGAGCAGCC  1025

Query 1037  CCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACTCCAGAGGGTCGAACTCTCCCATCCCCCCCACG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026  CCCAGCAAGGCAGCCAGCCCAGCGAGTCCAGCGGTGGCGACTCCAGAGGGTCGAACTCTCCCATCCCCCCCACG  1099

Query 1111  CAGGAGGACACCGACAGCGATGGGGAGGAACCACAGCTGTACTTCACGGAGCCCCAGCAGCTCCTGGATGTCTT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100  CAGGAGGACACCGACAGCGATGGGGAGGAACCACAGCTGTACTTCACGGAGCCCCAGCAGCTCCTGGATGTCTT  1173

Query 1185  CCGAGAGCTGGAGGAGCAGAACCTGTCGCTGATCCAGAACAGCCAGGAGACGGAGAAGACCCTGGAGGAGCTGA  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174  CCGAGAGCTGGAGGAGCAGAACCTGTCGCTGATCCAGAACAGCCAGGAGACGGAGAAGACCCTGGAGGAGCTGA  1247

Query 1259  GCCACACCCTGAAACACACCCAGATCCGCATGGACAGGGAGGTCAACCAGCTGAAGCAGTGGGTCACCACAATG  1332
            ||||||||||||||||||||||||||||||||                   |||.||         ||      
Sbjct 1248  GCCACACCCTGAAACACACCCAGATCCGCATG-------------------TGATGC---------CC------  1287

Query 1333  ATGATGTCCATCACCAAGGAGGAGGACACAGCAGCTGAGCTGGAGCTCAAAGCCCGAGTCTTCCACTTCGGCGA  1406
            |.||||||            .||||||    ||.||.                                     
Sbjct 1288  AGGATGTC------------TGAGGAC----CAACTC-------------------------------------  1308

Query 1407  GTACAAGGGCGATCAGCAGGATAAGCTGCTAGAGAGCCTGAACTGCAAGGTGCTGGATGTGTACCGGCACTGCA  1480
                                                                                      
Sbjct 1309  --------------------------------------------------------------------------  1308

Query 1481  CCGGCACCCAGCAGGAGGCCAACCTGGGCACCGTGCAGATGCTGACCATCATTGAGCACCAGCTGGATGAGCTG  1554
                                                                                      
Sbjct 1309  --------------------------------------------------------------------------  1308

Query 1555  CTAGAGAACCTGGAGCACGTGCCCCAGGTCAAGATCGAGCAGGCCGAGAGGGCAAAGGAGAAGGAGCGGCGCAT  1628
                                                                                      
Sbjct 1309  --------------------------------------------------------------------------  1308

Query 1629  CAGACTTCGAGAAGAGAAGCTCCAGATGCAAAAGATCCTACAGGAGGAGCATCTGCAGCGGGCCCGGGCGCGCG  1702
                                                                                      
Sbjct 1309  --------------------------------------------------------------------------  1308

Query 1703  CCCAGGCTGAGATCAAGAAGAAGAGAGGCAGGACACTGGTATGCCGCTCACGACCCCCAGCCCACAGGATCAAA  1776
                                                                                      
Sbjct 1309  --------------------------------------------------------------------------  1308

Query 1777  CAACAGTCTGAGCACACACTGATGGACAAGGAGGAGGAGGAGCTGCTATTTTTCTTTACT  1836
                                                                        
Sbjct 1309  ------------------------------------------------------------  1308

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