Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13646
Subject:
XR_002958275.1
Aligned Length:
2577
Identities:
201
Gaps:
2352

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCGCGTGAGTTTCGCTCTGTTTTATGTGTGCTTCCCAGTCCTGTGGTGCTGCTATACCGGGGACGTTGAGTCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCACAGACCTGGAAATTGCGGCCCCTCTTTCTCAACCCAGAGCAAATTGAGACGTCCGGAGTCTCACTCTGTCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTCAGGCTGTGAGTGCAGTCTCCTGATCTTGGCTCACTGCAACCTCTGTCTCCTGGGTTCAAGTGATTCTTGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCTCAGCCTACCAAGTAGCTGAGATACAGGATTGACTTCTAAAGACTCTTGGTACCTGAGGAAGAAACCCAGAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGGAAGAGGAAAGCAAAGGAGTCGGGGATGGCTCTTTCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TATAGGAACCTGGTCTCCCTGGATATCTCTTCCAAATGCATGATGAATACATTGTCATCAACAGGGCAAGGCAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TACAGAAGTGATCCACACAGGGACATTGCAGAGACAAGCAAGTTATCACATTGGAGCATTTTGCTCCCAGGAAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTGAGAAAGACATTCATGACTTTGTGTTTCAGTGGCAAGAAGATGAAACAAATGACCATGAAGCACCCATGACA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAAATAAAAAAGTTGACTAGTAGTACAGACCGATATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGGTCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCTTGAATCAAGATTTCATTTGCATTTGCGAAGACATAGGAGAATTCATACTGGAGAGAAACCTTACAAATGTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGAATGTGAGAAAGTTTTCAGTTGCAAATCACATCTTGAAATACATAGGATAATTCATACTGGAGAGAAACCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TACAAATGTAAGGTTTGCGACAAGGCTTTTAAGCATGATTCACACCTGGCAAAACATACTAGAATTCACAGGGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGACAAACATTACACATGTAATGAATGTGGCAAGGTTTTTGATCAAAAAGCAACCCTTGCATGTCATCATAGAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGACATCACACCTTGTGTAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CATCATAGACTGCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGACCTTCGCTCGAAATTCAGT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCTCGTAATTCATAAGGCAGTTCATACTGCAGAGAAACCCTATAAGTGTAATGAATGTGGCAAGGTTTTTAAGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AACGAGCAACTCTTGCAGGACATCGTAGAGTTCACACTGGAGAGAAACCTTACAGATGTGAAGAATGCGACAAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GTTTTCAGTCGCAAATCACATCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTGTGACAAGGCTTTCCGGAGTGATTCACGTCTTGCAGAACATCAGAGAGTTCATACTGGAGAGAGACCTTACA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CATGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCGTACCTCGCATGTCATCAAAAACTTCATACTGGAGAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AAACTTTACGAATGTGAAGAATGTGACAAAGTTTACATTCGCAAATCACACCTTGAAAGACATAGGAGGATTCA  1628

Query    1  --------------------------ATGATTGTGGCAAAGCCTTTACTTCACATTCACACCTCGTTGGACATC  48
                                      .|||||||||.||||||||||.|||||.|||||||||..||.|.||||
Sbjct 1629  TACAGGAGAGAAACCTCACAAGTGTGGTGATTGTGGTAAAGCCTTTAATTCACCTTCACACCTTATTAGGCATC  1702

Query   49  AGAGAATCCATACTGGACAGAAATCTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCGAGGTCACTCCTT  122
            |||||||||||||||||||||||||||.|||||||||||||||||||||||||||.||||.|||||||||||||
Sbjct 1703  AGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGTCTTTAGTCTGAGGTCACTCCTT  1776

Query  123  GCAGAACATGAGAAAATTCATTTTTGAGATAACTGTTCCCAATGCAGTGAGTATAGCAAACCATCAAGCATTAA  196
            |||||||||.|||||||||.||||.||||.||.||||.|.|.||||.|||||||||||||||||||||||||||
Sbjct 1777  GCAGAACATCAGAAAATTCCTTTTGGAGACAATTGTTTCAAGTGCAATGAGTATAGCAAACCATCAAGCATTAA  1850

Query  197  TTGACATTGGAGTCAATTCAGCATTGACT---------------------------------------------  225
            |||||||..|||||||.|||||||||||.                                             
Sbjct 1851  TTGACATCAGAGTCAAATCAGCATTGACCTGAGTTTGAGTTGACTTAACATTGATTTCAAGCATTAATCGACAT  1924

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1925  TAAACTGTTTATGTTAAGAGGATTGGGCCAGGCGTGGTGTCTCACACCTGTAATCCCAGCACTTTGAGAGGCCA  1998

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1999  AGACAGATGGAATCTTGCTCTGTCGCCCACGTTGGAGTGCAGTGATGTGATCTCGGTTCACTGCAACATTCACC  2072

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2073  TCCCAGGTTCATGCAATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACTACAGGATTGATTTCCAGAGACTTA  2146

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2147  TGTTACTTGAGGAAGACACCAAGAAGGCAAAGAAAAGGAGCCAGGGATGGCTCTTCCTCAGGGATACTTGACTT  2220

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2221  TCAGAGATGTGGCTATAGAGTTCTCTTTGCTGGAGTGGAAACGCCTGGACCCTGCACAGAACGCTTTATACAGG  2294

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2295  GCTGTGATGTGGGAGAACTACAGGAACCTGGAGTCTGTGGGTGAGGAAAATGTTCCTCCAGACATGAAGAATCT  2368

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2369  GTCCTTGTGTATCTTGGCTTTTCCTGGTTTTGTATTCTCTTTTGTGATTTTGCCCCATACGTGCTTTTGATGTA  2442

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2443  CACAGCTGGGATTCCAGGCACGTGCCACCATGCCCAGCATGTTATTTTGTATCTTTAGTGGAGATAGGGTTTTG  2516

Query  226  -------------------------------------------------------------  225
                                                                         
Sbjct 2517  CCATGTTGGCCAGGCTCGTCTCGAACTCCTGACCTCCATACCCACCCGCCTCGGCCTCTAA  2577

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