Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13646
Subject:
XR_002958277.1
Aligned Length:
2490
Identities:
201
Gaps:
2265

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TAGACCCGGAAGCGGATGGCAGGGACTGAAGGTCACACCACAGCGCAGTCTCACTCTGTCCTTCAGGCTGTGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCAGTCTCCTGATCTTGGCTCACTGCAACCTCTGTCTCCTGGGTTCAAGTGATTCTTGTGCCTCAGCCTACCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGTAGCTGAGATACAGGATTGACTTCTAAAGACTCTTGGTACCTGAGGAAGAAACCCAGAAGAGGAAGAGGAAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCAAAGGAGTCGGGGATGGCTCTTTCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCTCCCTGGATATCTCTTCCAAATGCATGATGAATACATTGTCATCAACAGGGCAAGGCAATACAGAAGTGATC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CACACAGGGACATTGCAGAGACAAGCAAGTTATCACATTGGAGCATTTTGCTCCCAGGAAATTGAGAAAGACAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCATGACTTTGTGTTTCAGTGGCAAGAAGATGAAACAAATGACCATGAAGCACCCATGACAGAAATAAAAAAGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGACTAGTAGTACAGACCGATATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGGTCAGCTTGAATCAAGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTCATTTGCATTTGCGAAGACATAGGAGAATTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGAGAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGTTTTCAGTTGCAAATCACATCTTGAAATACATAGGATAATTCATACTGGAGAGAAACCATACAAATGTAAGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTTGCGACAAGGCTTTTAAGCATGATTCACACCTGGCAAAACATACTAGAATTCACAGGGGAGACAAACATTAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACATGTAATGAATGTGGCAAGGTTTTTGATCAAAAAGCAACCCTTGCATGTCATCATAGAAGTCATACTGGAGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAAACCTTATAAGTGTAATGAGTGTGGCAAGACCTTTAGTCAGACATCACACCTTGTGTACCATCATAGACTGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGACCTTCGCTCGAAATTCAGTCCTCGTAATTCAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AAGGCAGTTCATACTGCAGAGAAACCCTATAAGTGTAATGAATGTGGCAAGGTTTTTAAGCAACGAGCAACTCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGCAGGACATCGTAGAGTTCACACTGGAGAGAAACCTTACAGATGTGAAGAATGCGACAAAGTTTTCAGTCGCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AATCACATCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTCCGGAGTGATTCACGTCTTGCAGAACATCAGAGAGTTCATACTGGAGAGAGACCTTACACATGTAATGAATG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TGGCAAGGTTTTTAGTACAAAAGCGTACCTCGCATGTCATCAAAAACTTCATACTGGAGAGAAACTTTACGAAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTGAAGAATGTGACAAAGTTTACATTCGCAAATCACACCTTGAAAGACATAGGAGGATTCATACAGGAGAGAAA  1554

Query    1  -------------ATGATTGTGGCAAAGCCTTTACTTCACATTCACACCTCGTTGGACATCAGAGAATCCATAC  61
                         .|||||||||.||||||||||.|||||.|||||||||..||.|.|||||||||||||||||
Sbjct 1555  CCTCACAAGTGTGGTGATTGTGGTAAAGCCTTTAATTCACCTTCACACCTTATTAGGCATCAGAGAATCCATAC  1628

Query   62  TGGACAGAAATCTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCGAGGTCACTCCTTGCAGAACATGAGA  135
            ||||||||||||||.|||||||||||||||||||||||||||.||||.||||||||||||||||||||||.|||
Sbjct 1629  TGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGTCTTTAGTCTGAGGTCACTCCTTGCAGAACATCAGA  1702

Query  136  AAATTCATTTTTGAGATAACTGTTCCCAATGCAGTGAGTATAGCAAACCATCAAGCATTAATTGACATTGGAGT  209
            ||||||.||||.||||.||.||||.|.|.||||.||||||||||||||||||||||||||||||||||..||||
Sbjct 1703  AAATTCCTTTTGGAGACAATTGTTTCAAGTGCAATGAGTATAGCAAACCATCAAGCATTAATTGACATCAGAGT  1776

Query  210  CAATTCAGCATTGACT----------------------------------------------------------  225
            |||.|||||||||||.                                                          
Sbjct 1777  CAAATCAGCATTGACCTGAGTTTGAGTTGACTTAACATTGATTTCAAGCATTAATCGACATTAAACTGTTTATG  1850

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1851  TTAAGAGGATTGGGCCAGGCGTGGTGTCTCACACCTGTAATCCCAGCACTTTGAGAGGCCAAGACAGATGGAAT  1924

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1925  CTTGCTCTGTCGCCCACGTTGGAGTGCAGTGATGTGATCTCGGTTCACTGCAACATTCACCTCCCAGGTTCATG  1998

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1999  CAATTCTCCTGCCTCAGTCTCCTGAGTAGCTGGGACTACAGGATTGATTTCCAGAGACTTATGTTACTTGAGGA  2072

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2073  AGACACCAAGAAGGCAAAGAAAAGGAGCCAGGGATGGCTCTTCCTCAGGGATACTTGACTTTCAGAGATGTGGC  2146

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2147  TATAGAGTTCTCTTTGCTGGAGTGGAAACGCCTGGACCCTGCACAGAACGCTTTATACAGGGCTGTGATGTGGG  2220

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2221  AGAACTACAGGAACCTGGAGTCTGTGGGTGAGGAAAATGTTCCTCCAGACATGAAGAATCTGTCCTTGTGTATC  2294

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2295  TTGGCTTTTCCTGGTTTTGTATTCTCTTTTGTGATTTTGCCCCATACGTGCTTTTGATGTACACAGCTGGGATT  2368

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2369  CCAGGCACGTGCCACCATGCCCAGCATGTTATTTTGTATCTTTAGTGGAGATAGGGTTTTGCCATGTTGGCCAG  2442

Query  226  ------------------------------------------------  225
                                                            
Sbjct 2443  GCTCGTCTCGAACTCCTGACCTCCATACCCACCCGCCTCGGCCTCTAA  2490

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