Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13646
Subject:
XR_002958278.1
Aligned Length:
2461
Identities:
201
Gaps:
2236

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCTCCCTGTTTTCAAGAGTCTCACTCTGTCCTTCAGGCTGTGAGTGCAGTCTCCTGATCTTGGCTCACTGCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTCTGTCTCCTGGGTTCAAGTGATTCTTGTGCCTCAGCCTACCAAGTAGCTGAGATACAGGATTGACTTCTAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGACTCTTGGTACCTGAGGAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCGGGGATGGCTCTTTCTCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCTCTTCCAAATGCATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGAATACATTGTCATCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAGAGACAAGCAAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTATCACATTGGAGCATTTTGCTCCCAGGAAATTGAGAAAGACATTCATGACTTTGTGTTTCAGTGGCAAGAAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATGAAACAAATGACCATGAAGCACCCATGACAGAAATAAAAAAGTTGACTAGTAGTACAGACCGATATGATCAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGGCATGCTGGAAACAAGCCTATTAAAGGTCAGCTTGAATCAAGATTTCATTTGCATTTGCGAAGACATAGGAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AATTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGAGAAAGTTTTCAGTTGCAAATCACATCTTGAAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TACATAGGATAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGCGACAAGGCTTTTAAGCATGATTCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CACCTGGCAAAACATACTAGAATTCACAGGGGAGACAAACATTACACATGTAATGAATGTGGCAAGGTTTTTGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TCAAAAAGCAACCCTTGCATGTCATCATAGAAGTCATACTGGAGAGAAACCTTATAAGTGTAATGAGTGTGGCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGACCTTTAGTCAGACATCACACCTTGTGTACCATCATAGACTGCATACTGGAGAGAAACCTTACAAATGTAAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GAGTGTGGCAAGACCTTCGCTCGAAATTCAGTCCTCGTAATTCATAAGGCAGTTCATACTGCAGAGAAACCCTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TAAGTGTAATGAATGTGGCAAGGTTTTTAAGCAACGAGCAACTCTTGCAGGACATCGTAGAGTTCACACTGGAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AGAAACCTTACAGATGTGAAGAATGCGACAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAGGAGGATT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCACGTCTTGCAGAACA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCAGAGAGTTCATACTGGAGAGAGACCTTACACATGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCGTACC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCGCATGTCATCAAAAACTTCATACTGGAGAGAAACTTTACGAATGTGAAGAATGTGACAAAGTTTACATTCGC  1480

Query    1  ----------------------------------------------------------ATGATTGTGGCAAAGC  16
                                                                      .|||||||||.|||||
Sbjct 1481  AAATCACACCTTGAAAGACATAGGAGGATTCATACAGGAGAGAAACCTCACAAGTGTGGTGATTGTGGTAAAGC  1554

Query   17  CTTTACTTCACATTCACACCTCGTTGGACATCAGAGAATCCATACTGGACAGAAATCTTGCAAATGTCATCAGT  90
            |||||.|||||.|||||||||..||.|.|||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1555  CTTTAATTCACCTTCACACCTTATTAGGCATCAGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGT  1628

Query   91  GTGGCAAGGTCTTCAGTCCGAGGTCACTCCTTGCAGAACATGAGAAAATTCATTTTTGAGATAACTGTTCCCAA  164
            |||||||||||||.||||.||||||||||||||||||||||.|||||||||.||||.||||.||.||||.|.|.
Sbjct 1629  GTGGCAAGGTCTTTAGTCTGAGGTCACTCCTTGCAGAACATCAGAAAATTCCTTTTGGAGACAATTGTTTCAAG  1702

Query  165  TGCAGTGAGTATAGCAAACCATCAAGCATTAATTGACATTGGAGTCAATTCAGCATTGACT-------------  225
            ||||.||||||||||||||||||||||||||||||||||..|||||||.|||||||||||.             
Sbjct 1703  TGCAATGAGTATAGCAAACCATCAAGCATTAATTGACATCAGAGTCAAATCAGCATTGACCTGAGTTTGAGTTG  1776

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1777  ACTTAACATTGATTTCAAGCATTAATCGACATTAAACTGTTTATGTTAAGAGGATTGGGCCAGGCGTGGTGTCT  1850

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1851  CACACCTGTAATCCCAGCACTTTGAGAGGCCAAGACAGATGGAATCTTGCTCTGTCGCCCACGTTGGAGTGCAG  1924

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1925  TGATGTGATCTCGGTTCACTGCAACATTCACCTCCCAGGTTCATGCAATTCTCCTGCCTCAGTCTCCTGAGTAG  1998

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 1999  CTGGGACTACAGGATTGATTTCCAGAGACTTATGTTACTTGAGGAAGACACCAAGAAGGCAAAGAAAAGGAGCC  2072

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2073  AGGGATGGCTCTTCCTCAGGGATACTTGACTTTCAGAGATGTGGCTATAGAGTTCTCTTTGCTGGAGTGGAAAC  2146

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2147  GCCTGGACCCTGCACAGAACGCTTTATACAGGGCTGTGATGTGGGAGAACTACAGGAACCTGGAGTCTGTGGGT  2220

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2221  GAGGAAAATGTTCCTCCAGACATGAAGAATCTGTCCTTGTGTATCTTGGCTTTTCCTGGTTTTGTATTCTCTTT  2294

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2295  TGTGATTTTGCCCCATACGTGCTTTTGATGTACACAGCTGGGATTCCAGGCACGTGCCACCATGCCCAGCATGT  2368

Query  226  --------------------------------------------------------------------------  225
                                                                                      
Sbjct 2369  TATTTTGTATCTTTAGTGGAGATAGGGTTTTGCCATGTTGGCCAGGCTCGTCTCGAACTCCTGACCTCCATACC  2442

Query  226  -------------------  225
                               
Sbjct 2443  CACCCGCCTCGGCCTCTAA  2461

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