Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13667
- Subject:
- XR_002958314.1
- Aligned Length:
- 4425
- Identities:
- 96
- Gaps:
- 4318
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGTGAAGGTCACGTCGCCATGATATCTCTTCCAAATGCTTGATGAAAAAGGTGGAAGGGTCACTTGACCCAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGTTGAAGGCTGCAGTGAGCCCTGTTTTTGCCACCACACTCCAGCCTGGGATTGATTTCTAAAGACTCATGTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGTGAGGAAGCAGCTCAGAAGAGGAAAGGAAAGGAGTCAGGCATGGCTCTTCCTCAGGGACGCTTGACTTTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGATGTGGCTATAGAATTCTCATTGGCAGAGTGGAAATTCCTGAACCCTGCACAGAGGGCTTTGTACAGGGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGATGTTGGAGAACTACAGGAACCTGGAGGCTGTGGATATCTCTTCCAAACACATGATGAAGGAGGTCTTGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACAGGGCAAGGCAATAGAGAAGTGATCCACACAGGGACATTGCAAAGACATCAAAGTTATCACATTGGAGACT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTTGCTTCCAGGAAATTGAGAAAGAAATTCATAACATTGAGTTTCAGTGTCAAGAAGATGAAAGAAATGGCCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGCACCCACGACAAAAATAAAAAAGTTGACTGGTAGCACAGACCAACATGATCACAGGCATGCTGGAAACAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATCTGCCTGAACTCCACATATTTCAGATCAAAGGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAATTGCTAATCAACTTGAGAAGTCTACCAGTGATGCTTCCTCAGTTTCAACATCCCAAAGAATTTCCTGTAGG 740
Query 1 -------------------------ATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTGGGAAG 49
|||||||||||.||||..||||||||||||.|..||||||| ..|||||
Sbjct 741 CCCCAAATCCATATTTCTAATAACTATGGGAATAATCCCCTGAATTCTTCATTACTCCCACAAAAA-CAGGAAG 813
Query 50 TACACATGAGAGAAAAATCTTTCCAATGTAATGAGAGTGGCAAATCCTTTAATTATAGC--------------- 108
||||||||||||||||||||||||.|||||||||||||||||||.|||||||||.||||
Sbjct 814 TACACATGAGAGAAAAATCTTTCCCATGTAATGAGAGTGGCAAAGCCTTTAATTGTAGCTCACTCTTAAGGAAA 887
Query 109 -------------------------------------------------------------------------- 108
Sbjct 888 CACCAGATACCCCATTTAGGAGACAAACAATATAAATGTGATGTATGTGGCAAGCTCTTTAATCACAAGCAATA 961
Query 109 -------------------------------------------------------------------------- 108
Sbjct 962 CCTTGCATGCCATCGTAGATGTCACACTGGAGAGAAACCTTACAAGTGTAAAGAGTGTGGAAAGTCCTTCAGTT 1035
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1036 ACAAGTCATCCCTTACATGCCATCATAGACTTCATACTGGAGTAAAACCTTACAAGTGTAATGAGTGTGGCAAG 1109
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1110 GTCTTTCGTCAAAATTCAGCCCTTGTAATTCATAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGA 1183
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1184 ATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGCCATCAAAGACTTCATACTGGAGTGAAACCTTACA 1257
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1258 AATGTAAGATTTGTGAGAAGGCTTTTGCGTGTCATTCCTATCTGGCAAACCATACTAGAATTCATAGTGGAGAG 1331
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1332 AAAACATACAAGTGTAATGAGTGTGGTAAGGCTTTTAATCATCAATCAAGCCTTGCACGTCATCATATACTTCA 1405
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1406 TACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCAGAAATCAACCCTTGAGAGACATA 1479
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1480 AGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATACAGCTTTCACGTGTAATTCACAGCTG 1553
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1554 GCACGACATAGAAGAATTCACACTGGAGAGAAAACTTACAAGTGTAATGAGTGTCGCAAGACCTTCAGCCGCAG 1627
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1628 GTCATCCCTTCTATGCCATCGTAGACTTCATAGTGGTGAAAAACCTTACAAGTGTAATCAGTGTGGCAATACCT 1701
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1702 TCCGTCACCGGGCATCCCTTGTATACCATCGTAGACTTCACACTCTAGAGAAATCTTACAAATGTACGGTTTGT 1775
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1776 AACAAGGTTTTCATGCGTAATTCAGTCCTGGCTGTACATACTAGAATTCACACTGCAAAGAAACCTTACAAGTG 1849
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1850 TAATGAATGTGGGAAAGCTTTTAATCAACAATCACATCTTTCACGTCATCGTAGACTTCATACTGGAGAGAAAC 1923
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1924 CTTACAAATGTGAAGCATGTGACAAAGTTTTTGGTCAGAAATCAGCTCTTGAGTCACATAAGAGAATTCATACT 1997
Query 109 -------------------------------------------------------------------------- 108
Sbjct 1998 GGAGAGAAACCATACAGATGTCAGGTTTGTGACACAGCTTTCACGTGGAATTCACAGCTGGCACGACATACAAG 2071
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2072 AATTCACACTGGAGAAAAAACTTACAAGTGTAATGAGTGTGGGAAGACCTTCAGTTACAAGTCATCACTTGTAT 2145
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2146 GGCATCGTAGACTTCATGGTGGAGAGAAATCTTACAAATGTAAGGTTTGTGACAAGGCTTTCGTGTGTCGTTCC 2219
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2220 TATGTGGCAAAACATACTAGAATTCACAGTGGAATGAAACCTTACAAGTGTAATGAGTGCAGCAAGACCTTCAG 2293
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2294 TAACAGGTCATCCCTTGTATGCCATCGTAGAATTCATAGTGGTGAGAAACCTTACAAGTGTAGTGAGTGCAGCA 2367
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2368 AGACGTTCAGTCAGAAGGCAACCCTTCTATGCCATCGTAGACTTCATAGTGGTGAGAAACCTTACAAGTGTAAC 2441
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2442 GACTGTGGCAATACCTTCCGTCACTGGTCATCCCTTGTATACCATCGTAGACTTCATACTGGAGAGAAATCTTA 2515
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2516 CAAATGTACGGTTTGTGACAAGGCTTTCGTGCGTAATTCATACCTGGCAAGACATATTAGAATTCACACTGCAG 2589
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2590 AGAAACCTTACAAGTGTAATGAATGTGGAAAGGCTTTTAATGAACAATCACACCTTTCACGTCATCATAGAATT 2663
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2664 CATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTCAGTCGCAAATCACACCTTAAAAGACA 2737
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2738 TAGGATAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAGCCTTTAGTGACCGGTCAACAC 2811
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2812 TTATTCACCATCAGGCAATTCATGGTATAGGGAAATTTGATTAATATAATGATTGTCACAAAGTCTTCAGTAAC 2885
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2886 ACTACAACAATTGCAAATCATTGGAGAATCCATGATGAAGAGAAATCTTCTGAGTGTAATAAATGTGGCATGTT 2959
Query 109 -------------------------------------------------------------------------- 108
Sbjct 2960 TTTCAGACATTGTTCATACATTGCAGTTCATTGGCAACCTCATACTGGAGAGAAACCTTACAAATGTCATGATT 3033
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3034 GAGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACAGGAGAATTCATACAGGAGAGAAACCTCACAAGTG 3107
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3108 TGATGATTGTGGCAAAGCCTTTACTTCACATTCACACCTCGTTGGACATCAGAGAATCCATACTGGACAGAAAT 3181
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3182 CTTGCAAATGTCATCAGTGTGGCAAGGTCTTCAGTCCGAGGTCACTCCTTGCAGAACATGAGAAAATTCATTTT 3255
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3256 TGAGATAACTGTTCCCAATGCAGCTTTTCAGTAAGTGGTATGCCTGGGAAACATGGTGAGACCCCCGTTTCTGC 3329
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3330 AAAAAATACAAAAATTAGCTGGGAATGATGGCACATGCCTGCAGTATCAACTACTGTGGAGTCTGCAGTGGGAG 3403
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3404 GATGGCTTGAGCCTGGGAGGTCAAGACTATAGTGAGCTGTAATCATGCTACTGCACTCCAGCATGGTTGACAGA 3477
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3478 GCAAGATGCTGTCTAAAAAAGAATACTTATTGTAAAGTTTGGGTACAGGAATAATGAAGTCATTGATAGTTTAT 3551
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3552 GAACAGGCTATGGAGTTGATGCCCAAAAGAAATAAACAGTTTGTAAATGAATAACTTATTTTGAGTTGTGACAA 3625
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3626 GACAATGTTGAAAGTGATGCATGAAGCGGCAGGCAGACCATCCACATCAGTTTTACAGAAAAAAAGTTAATCTT 3699
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3700 GTTCGTGCTGCAGTGAAGAGAACAGCAAACAGGAGAAACAATAGTCAGGAATTCAATAATAGCCTGGTTAACAT 3773
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3774 GATGAAACCCCGTCTCTACTAAAAATACAAAGATTAGCTGGGCACAGTGGTGGGCACCTGTAATCCCAGCTACT 3847
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3848 CAAGAGGCTGAGGCAGAAGAATTGCTTGAACCCGGGAGGCGGAAGTTTCGATGAGCCGGGATCCTGCCGTTGCA 3921
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3922 CTCCAGCCTGGGCAACAAGAGCAAACCTCTGTCTAAAACAAACAAACAAAAAGGTCTAGCCCCCTCTCCTCCTT 3995
Query 109 -------------------------------------------------------------------------- 108
Sbjct 3996 TGTCTGCCATCATGGTGTGTGCTTGACTCCACTTCTTGTCATGTCTTCTCACAAGACTTTCAGGATTAAGCGGT 4069
Query 109 -------------------------------------------------------------------------- 108
Sbjct 4070 TTCTGGCCAACAACCAAAAGTAAAATCGTCCGATTTCCCAGTGGATTCGAATGAAAACTGGCAATAAAATCAGG 4143
Query 109 -------------------------------------------------------------------------- 108
Sbjct 4144 TCCAACTTTAAAAGGAGACATTGGAGAAGAACCAAGCTGGGTCTATAAGGAATTGCACGTGAGATGGCACACAT 4217
Query 109 -------------------------------------------------------------------------- 108
Sbjct 4218 ATTTATGCTGTGTGAGCATCATAATCACGTTACTTAAGCTGAAAATGTCACTACCATCTGGAGACTTGGACATG 4291
Query 109 -------------------------------------------------------------------------- 108
Sbjct 4292 TTTTATTGGGAATATATTTTTTTCTCTCTGAATCTGTTATGAACGCATTGGTTGGGTGGGTTCAGTAATAAACA 4365
Query 109 ----------------------------------------------------------- 108
Sbjct 4366 TGTGAGACCTTTCATTTCAAAAAAAAAATTTTAATGACATAATAGATTACCTAAATTTC 4424