Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13704
Subject:
XR_001744737.2
Aligned Length:
2444
Identities:
238
Gaps:
2204

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC  518

Query    1  ----------------------------------ATG--CAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC  38
                                              |||  .||||||||||||||||||||||||||||||||||
Sbjct  519  GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC  592

Query   39  TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA  112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA  666

Query  113  TGGTTTCCATGATCGTGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAA-  185
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  667  TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAG  740

Query  186  ---------------------------------------GAACATGGAAGGGGTGCTGATGGACGTGGACTGTG  220
                                                   |||||||||||||||||||||||||||||||||||
Sbjct  741  TTGACTGAGGTCATTCCTGAGTTGCAGTATGTTGAGAGGGAACATGGAAGGGGTGCTGATGGACGTGGACTGTG  814

Query  221  AGAGCGTCTACCCCATTGTG------------------------------------------------------  240
            ||||||||||||||||||||                                                      
Sbjct  815  AGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCTGGCCTCTGCTGTGGGTGAATTTCTGTACTGGAAA  888

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct  889  CTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGAC  962

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct  963  TTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCTCCACGACCACGCTGCTTACTTAGTAGACAACC  1036

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1037  TGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGGTCTGACAAGCCTGCTGCTGGAGAAGGACCAGAGC  1110

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1111  ACGTGCCACATGGAGCCAGGGCCAGGGACCTTCCACCTCCTAGGGTGAAACCAGGAGAGATTGCTTGCTTCACT  1184

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1185  TGTACAAGGCAGGAACGGTGGCATGGGGTGGGGGAAACTTGGAGTTGGAAGGTGGCTAATCTTTGATTCTATGT  1258

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1259  TTTTGATCCTCCTGGCACTCCAGACCTGGGTGATGTGCAGGAGAGCACACTGATAGAAATCCTTGTGTCCAGTG  1332

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1333  CCCAGCAACTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGGCGCCCGCCACCACGCCTGGCTAACTTTTT  1406

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1407  TGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCTTGACCTTGTGATCCACCT  1480

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1481  GCCTCATCATCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCAGCATGTTAGACAATTTTTAATTCA  1554

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1555  TCCTCTCTGTGCTGTTGTTTTCTCAGCTGTGAAAGGAATATTCTGGTGGGGACAAGGTTACAGAGTTGCTGAGA  1628

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1629  GGGTCTCATGACATGAAGGTACTGGCCTTGGCACAGTGCCTGGGGGGGCGGGGACTCCGCACATGCCTGTGATG  1702

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1703  TCACAGTTACTGTCAGTTCACAGCGAACCTTCCCTCCTTTTCCTGTTGACTTTCCCACACTCCTGTAACCCTCC  1776

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1777  CTCCCTCCCTTCTTCCTCTCTCTCTCTCTCACTCACGCACACGCACACACACACACACACACACACACACACAC  1850

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1851  ACTCCATTCTCTGTCTCCATGACTCTGGAGTAAACTAACGTCTCGAGTTGCCATTGGAAGCCCCATTGTCCTCA  1924

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1925  TTTTGTTTTGTTTTGTTTGTTTGAGACGGGGTCTCGCTCTGTCCCCCAGGCTGGAGTGCAGTGGTGCGATCTCA  1998

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 1999  GCCCACTGCAGCCTCCGCCTCCTAGGTTCAAGCGATTCTCCTGCCTCACCCTCCTGAGTAGCTGTGATCATAGG  2072

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 2073  TGCCCGCCACCACACCCGACTAATTTTTGTGTTTTTTAGTAGAGACAGGGTTTCACTATGTTGGCCAGGCTGGT  2146

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 2147  CTCAAACTCCTGACCTCAGGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACCA  2220

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 2221  TGCCCAGCCTCCGTTGTCCTCATTTAGACTTTCATGGGTTATAGGCACTTTTGACTTCCTGGGGTCCTTCTTCA  2294

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 2295  GTTAAAAAAAAAAATTAGAAAATTAGGCCGGGCGTGGTGGCACATGCCTGTAATCCCAGCACTTTATGAGGCCG  2368

Query  241  --------------------------------------------------------------------------  240
                                                                                      
Sbjct 2369  AGGTGGGAGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGACCAATGTGGAGAAACCCCGTCCCTACTAAA  2442

Query  241  --  240
              
Sbjct 2443  AA  2444

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