Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13704
- Subject:
- XR_002956449.1
- Aligned Length:
- 4070
- Identities:
- 237
- Gaps:
- 3830
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GACTGCGTTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCATGCCGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAA 296
Query 1 ------------------------ATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCT 50
|.||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCAGCAAAACGACCACTGAAAACAACGCCGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCT 370
Query 51 GTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGA 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGA 444
Query 125 TCGTGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGG 198
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGG 518
Query 199 GTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTG-------------------------------- 240
||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCTGGCCTCTGCTGT 592
Query 241 -------------------------------------------------------------------------- 240
Sbjct 593 GGGTGAATTTCTGTACTGGAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCC 666
Query 241 -------------------------------------------------------------------------- 240
Sbjct 667 AGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTC 740
Query 241 -------------------------------------------------------------------------- 240
Sbjct 741 TTCTCCAGGCTGACAAGGCGAAGGGCATGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGA 814
Query 241 -------------------------------------------------------------------------- 240
Sbjct 815 ATCATTAGGCGTCTTCCCTTCGCTCCCCACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCA 888
Query 241 -------------------------------------------------------------------------- 240
Sbjct 889 GGCTGGAGTACAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTA 962
Query 241 -------------------------------------------------------------------------- 240
Sbjct 963 GCCTCCTGAGTAGCTGGGATTACAGGTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTT 1036
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1037 AGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGG 1110
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1111 CCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCT 1184
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1185 CTGGCTCTCAATGGAGACATCAAGCCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCT 1258
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1259 GCCATTGTGCAGGGAGCAATTGAAAAATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCA 1332
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1333 CTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCC 1406
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1407 CGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCT 1480
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1481 GAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCT 1554
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1555 GCGCAACAAGAGTGAAACTGTCTCAAAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCA 1628
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1629 GTTAGTTCGATTATTAGAAGACTAGATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAG 1702
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1703 GAGGAATGTACCTCCCCACCCATTCCTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGA 1776
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1777 CAAGGTGAGCAGAGATTTGCAGTGGGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGA 1850
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1851 AGCACACTCCCCAGCCCCTCCTTAGCCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCC 1924
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1925 AGCCGTGGCTGGGAGCAAGCCTGGAAGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCT 1998
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1999 CGCTCTATCGCCCAGGCTGGAGTGCAGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAG 2072
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2073 CTATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGAT 2146
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2147 GCTGCATTGAATTGAGCAAAGGAACTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGG 2220
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2221 CAGAGCAGTGGTGGGGACCTGTTTCCAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAG 2294
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2295 AGGAGAGGGTGATGTTTGACAGTGGCTGCCTGCCCTGAAAATCGCCCTTGTCTGTCCAGCCTGGCCTGAATTTC 2368
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2369 ACCCACATCAACCCACATGGGATACTTTATTTATTTATTTATCTATTTATTTATTTATTTATTTATTTTAGAGC 2442
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2443 CAGGGTCTCACCCTGTGGCCCAGGCTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTCAAACTCCTGGG 2516
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2517 CTCAAGTGATCCTCCCGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGAACACACCACTGTGCCTGGCTTATTT 2590
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2591 TTCTTTTTTTTTTTGGTAGAGATGGGGGTCTCTCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTG 2664
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2665 ATCCTCCTGCCTCGGCCTCCCAAAGTACTGGGATTACAGAATCGGCTCCCAGACACCTGCCACTCGTGAATGCA 2738
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2739 TCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGCGATGACATGGATCCTGCGGACAAACCGCCC 2812
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2813 CAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCAC 2886
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2887 GCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCA 2960
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2961 GGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGG 3034
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3035 GGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGT 3108
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3109 GAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGC 3182
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3183 CCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGC 3256
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3257 CGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAGCCCAGGCTGGA 3330
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3331 GTTCAGTGATGGATCTCAGCTCACTGCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCGGCCTCCCA 3404
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3405 AGTAGCTGGGATTACAGACGTGCACCACCAGGCCCAGCTAATTTATTTTTTAGTTTTTAATTTGCTGGTAAGAT 3478
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3479 GGTTTGTAGCTTTGTTGCCTAGGCTGGTCTTGAACTCCTGGCTTCAAGCGATCCTCCAGTCTTGACCTCCCAAA 3552
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3553 GTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTTCAATACTGCCCCATTGGGGGTTACGTTTCCAACACATG 3626
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3627 AAATTAGGAGGATACATTCAAACCACAGCAGTATATTATGACCATAATATTCATTAACTGTGTAACAGGCTGGG 3700
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3701 CGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCAGAGTGGGTAGATCACTCGAGGTCAGGAGTTTG 3774
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3775 AGACCAGCCTGGCCCACATGATGAAACCGCCTCTCTACTAAAAATACAAAAAATTAGCCGGTGTGGTGGCAGGC 3848
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3849 GCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGGAGGTGGAGGTGGCAGTGAG 3922
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3923 CCTGATTGCACCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAATAAACAAACAAACAAACAA 3996
Query 241 -------------------------------------------------------------------------- 240
Sbjct 3997 AACCTGTATAACAGAGTGTCATTGAATTTCTAAACGTTGAAAGACTTCACATTAAAAAAAAACTCACAATTTAA 4070