Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13723
Subject:
XM_006507179.3
Aligned Length:
2919
Identities:
1148
Gaps:
1632

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGCGCACCTGAAAAAGCGGGTGTATGAGGAGTTCACTAAAGTGGTTCAGCAGCAGGAGGAAATTGCTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAAGAAGCTCCGATTAACAAAGCCGAGCAAATCTGCCGCTCTCCACATAGATCTGTGTAAAGCCACCTCCCCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGATGCTTTGCAGTACCTACTCCAGTTTGCCAGAAAGCCTGTAGAAGCAGAGAGTGTGGAGGGGGTAGTCAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTCTCTTGGAACATTATTACAAGGAAAATGATCCATCTGTGAGACTGAAAATTGCATCACTCTTGGGATTATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATCAAAGACGGCAGGATTCTCTCCAGACTGCATAATGGACGACGCCATTAACATACTACAGAATGAAAAGTCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACCAAGTGCTAGCTCAACTACTGGACACTTTGCTTGCAATTGGCAGTAAACTACCAGAAAATCAAGCTACCCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTGCGATTAGTGGATGTGGCCTGCAAGCACCTGACAGATACTTCCCATGGTGTAAGAAATAAGTGCTTGCAATT  518

Query    1  ------------------------------------------------ATG--CAGCGGCCGCTGAGGGTGGCG  24
                                                            |.|  ||||.|||    ||.|..|..
Sbjct  519  ACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATACTGAAGGCTCAGCTGCC----AGAGATGTT  588

Query   25  CA----------GGGGCCCCGGCCAG-----------CCCGGGGCTG--CAGCAG---------------TGCG  60
            ||          ||||.||....|||           |.||||.|.|  ||||||               ||  
Sbjct  589  CAGAAAATTATCGGGGACCACTTCAGTGACCAAGATCCACGGGTCAGAACAGCAGCTATAAAAGCCATGTTG--  660

Query   61  GACAGCTCCA------------GAAGCT-CATC----------------GGCATCTCCATTG------GCAGCC  99
              ||||||||            ||||.| ||.|                |||.|.|..||||      |..|.|
Sbjct  661  --CAGCTCCATGAAAGAGGACTGAAGTTACACCAAACGATTTATAATCAGGCCTGTAAATTGCTCTCTGATGAC  732

Query  100  TGCGCGGGCTGGGCACCAAGTGCGCTGT------GTCCAAC--------GACCTCACCGAGCAGGAGATACGGA  159
            |.||          |.||.||||||.||      |||||.|        |...|||.|.|||        ...|
Sbjct  733  TACG----------AGCAGGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTTGTCAGCCAGC--------TCTA  788

Query  160  CCCTG-GAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGAAAAATTT  232
            .|||| |||.||.||.|||||.||.|||||||||||||||||.||..|||||||||||||.|||||||||||||
Sbjct  789  TCCTGAGAGTATAGTTCCAATACCGTCTTCTAATGAAGAAATCCGTCTAGTTGATGATGCATTTGGAAAAATTT  862

Query  233  GTCACATGGTCAGTGATGGCTCTTGGGTGGTTCATGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTC  306
            |.||||||||||||||||||||.||||||||||.||||||.||.|||||.||.||||||||.|||||||||||.
Sbjct  863  GCCACATGGTCAGTGATGGCTCCTGGGTGGTTCGTGTTCAAGCTGCAAAGCTATTGGGCTCGATGGAGCAAGTT  936

Query  307  AGTTCTCATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGA  380
            ||.||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  937  AGCTCTCATTTCTTGGAGCAGACTCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGCACTGCACATGA  1010

Query  381  GCGTGCCAAGGAACTTTACAGTTCAGGGGAGTTTTCCAGTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAG  454
            ||||||||||||||||||||||||.||||||||||||||||||||.||.||||.||||||||||||||||||||
Sbjct 1011  GCGTGCCAAGGAACTTTACAGTTCGGGGGAGTTTTCCAGTGGCAGGAAATGGGGAGATGATGCTCCCAAGGAAG  1084

Query  455  AAGTAGATACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAG  528
            ||.||||.||.|||||.||||||.||||.|||||||||||.||||||||.||||||||||||||||||||||||
Sbjct 1085  AAATAGACACGGGGGCCGTGAACCTGATAGAGTCAGGAGCGTGTGGAGCCTTTGTTCATGGGTTGGAAGATGAG  1158

Query  529  ATGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAA  602
            ||||||||||||||.|||||||||||||||||.||.||||||.|.|||||||||||.||||||||||||||.||
Sbjct 1159  ATGTATGAGGTTCGCATTGCTGCTGTGGAGGCTCTGTGCATGCTAGCCCAGTCTTCGCCCTCTTTTGCTGAAAA  1232

Query  603  GTGCCTTGATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCCATACATACCATGA  676
            |||||||||.||.|||||||||||||||||.|||||||||||||||||.|||||||||||||||||.|||||||
Sbjct 1233  GTGCCTTGACTTTCTAGTTGACATGTTCAATGATGAAATTGAGGAAGTGCGTCTGCAGTCCATACACACCATGA  1306

Query  677  GAAAAATCTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCAGCC  750
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct 1307  GAAAAATCTCTAACAATATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGTTAGAGGATTCATCC  1380

Query  751  AGAGATATTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGC  824
            ||.||||||.||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||||||||
Sbjct 1381  AGGGATATTAGAGAGGCTCTTCATGAACTCTTATGCTGCACTAATGTCTCAACCAAAGAAGGGATTCATCTTGC  1454

Query  825  ATTGGTGGAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTC  898
            |.||||||||||.||.|||||..|||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 1455  ACTGGTGGAGCTTCTAAAAAACCTAACCAAGTACCCTACTGACAGGGACTCCATATGGAAGTGCTTGAAGTTTC  1528

Query  899  TGGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACA  972
            ||||.||.||||||||.|||||.||||||||..|||||||||||||..|||||||.||||||||||||||.||.
Sbjct 1529  TGGGCAGCCGGCATCCGACCCTCGTGCTTCCTCTGGTGCCAGAGCTCTTGAGCACGCACCCATTTTTTGATACT  1602

Query  973  GCTGAACCAGACATGGATGATCCAGCTTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCC  1046
            |||||||||||||||||.|||||||||||.|||||||||||.||.|||||.||||||||||||||.||||||||
Sbjct 1603  GCTGAACCAGACATGGACGATCCAGCTTACATTGCAGTTTTAGTTCTTATCTTCAATGCTGCTAAGACCTGTCC  1676

Query 1047  AACAATGCGAGCATTGTTCTCAGATCACACCGTCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTG  1120
            .|||||||.||||.|.||||||||.||||||.||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1677  TACAATGCCAGCACTCTTCTCAGACCACACCCTCAGGCACTATGCCTACCTCCGAGACAGCCTTTCTCATCTTG  1750

Query 1121  TTCCTGCCTTGAGGTTACCAGGTAGAAAACTGGTGTCATCAGCTGTTTCTCCC----AGCATCATACCTCAAGA  1190
            ||||||||||||||||||||||.||||||||||||||.||..|||    ||||    |.|||||..|||||.||
Sbjct 1751  TTCCTGCCTTGAGGTTACCAGGGAGAAAACTGGTGTCCTCCACTG----TCCCCTCTAACATCACCCCTCATGA  1820

Query 1191  GGATCCTTCGCAGCAGTTCCTGCAGCAGAGCCTTGAAAGAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAG  1264
            .||||||||.|||||||||||||||||||||||||||||.|||||||||.||||||||.|.||.||||||||.|
Sbjct 1821  AGATCCTTCCCAGCAGTTCCTGCAGCAGAGCCTTGAAAGGGTGTATAGTGTTCAGCACCTAGATCCTCAGGGGG  1894

Query 1265  CCCAGGAGCTGCTGGAATTCACCATC------------------------------------------------  1290
            ||||.|||||||||||||||||||||                                                
Sbjct 1895  CCCAAGAGCTGCTGGAATTCACCATCAGAGATCTGCAAAGACTTGGAGAGCTTCAGTCTGAATTGGCAGGAGTA  1968

Query 1291  ----------------------------------------------AGGCCTTGCAGGAAAAGTCGTGGAATG-  1317
                                                          |||||||||||||||||..|||||||| 
Sbjct 1969  GCTGACTTCTCTGCCACCTATCTTCAGTGTCAACTGCTCCTCATTAAGGCCTTGCAGGAAAAGCTGTGGAATGT  2042

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2043  GGCTGCCCCCTTGTATCTAAAGCAGAGTGATTTGGCCTCAGCAGCAGCAAAACAGATCATGGAGGAAACCTACA  2116

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2117  AAATGGAGTTTATGTACAGTGGTGTGGAAAACAAGCAGGTTGTGATCATACAGCACATGAGGCTTCAGGCCAAA  2190

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2191  GCTCTGCAACTCATAGTAACTGCACGAACTACTCGAGGAGTAGACCCCTTATTTGGAATGTGTGAAAAATTTTT  2264

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2265  ACAGGAAGTGGATTTTTTTCAGAGGTGTTTCATTGCGGATTTGCCCCACCTTCAAGATAGCTTTGTGGACAAAC  2338

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2339  TCCTTGATCTTATGCCCCGACTCATGGCATCTAAACCTGTTGAAGTGATCAAAATTCTGCAGACAATGCTGCGG  2412

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2413  CAGAGCACCTTCTTACATCTTCCGCTTCCAGAGCAGATACACAAAGCCTCAGCCACCATTATTGAGCCGGCAGG  2486

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2487  AGAGTCAGACAATCCTTTGCGGTTTACATCTGGGTTGGTGGTAGCCTTGGATGTGGATGCAACCCTGGAACATG  2560

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2561  TGCAAGACCCCCAGAACACTGTCAAGGTTCAGGTCTTATATCCAGATGGCCAGGCTCAGATGATCCACCCCAAG  2634

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2635  CCAGCAGATTTCCGGAATCCTGGCCCAGGACGGCACCGTCTCCTCACTCAGGTGTACCTCTCCCATACTGCCTG  2708

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2709  GACAGAACCATGCCAAGTGGAAGTGAGGCTATTGCTGGCCTACAACTCCGGTGCACGAATTCCAAAATCTCCAT  2782

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2783  GGCTGGAGGGTAGTGAGATGTCACCACAGGTGGAAACCAGCATCGAGGGCACCATCCCCTTCAGTAAGCCTGTG  2856

Query 1318  ---------------------------------  1317
                                             
Sbjct 2857  AAAGTCTACATAATGCCCAAGCCTGCAAGACGC  2889

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