Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13723
Subject:
XM_017018560.2
Aligned Length:
2755
Identities:
1248
Gaps:
1463

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGCGCACCTTAAGAAGCGGGTTTATGAGGAATTCACGAAAGTGGTTCAGCCACAGGAGGAAATTGCTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAAGAAACTCCGACTAACAAAACCAAGTAAATCTGCAGCACTCCACATAGATCTGTGTAAAGCTACCTCCCCAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGATGCTTTGCAATACTTGCTCCAGTTTGCCAGGAAGCCTGTCGAGGCGGAAAGCGTAGAGGGAGTAGTCAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTCTCTTGGAACATTATTACAAGGAGAATGATCCATCTGTGAGACTGAAAATTGCATCATTGTTGGGTTTATT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATCAAAGACAGCAGGATTTTCACCAGACTGCATTATGGATGATGCCATCAACATCCTGCAGAATGAAAAGTCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATCAAGTCCTAGCTCAACTGCTGGATACTTTGCTTGCAATTGGCACTAAGCTACCAGAGAATCAAGCTATCCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGCGATTAGTTGATGTGGCCTGCAAGCATCTGACAGATACGTCTCATGGTGTAAGAAATAAGTGCCTGCAGTT  518

Query    1  -----------------------------------------ATGCAG-CGGCC--GCTG---------------  15
                                                     |||||| .||||  ||||               
Sbjct  519  ACTTGGCAATCTTGGCTCTTTGGAGAAAAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGA  592

Query   16  -------AGGGTGGCG-------CAGGGGCCCCGGCCAGCCCGGGGCTGCAGCAGTGCGGACAGCTCCAGAAGC  75
                   ||||    |       |||.|.||..|.||  |.||.|.|.| |.|||      |||||..|.||||
Sbjct  593  AGATTATAGGG----GATTACTTCAGTGACCAAGACC--CACGTGTCAG-AACAG------CAGCTATAAAAGC  653

Query   76  TCATCG--GCATCTCCAT----------TGGCA------------------------GCCTG-------CGCGG  106
             ||| |  |||.||||||          ||..|                        |||||       |.|  
Sbjct  654  -CAT-GTTGCAGCTCCATGAAAGAGGACTGAAATTACACCAAACAATTTATAATCAGGCCTGTAAATTACTC--  723

Query  107  GCTGGGCAC------CAAGTGCGCTGT------GTCCAAC--------GACCTCACCGAGCAGGAGATACGGAC  160
            .|||...||      |||||||||.||      |||||.|        |.|.|||...|||        ...|.
Sbjct  724  TCTGATGACTATGAACAAGTGCGCAGTGCTGCAGTCCAGCTTATCTGGGTCGTCAGTCAGC--------TCTAT  789

Query  161  CCTG-GAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGAAAAATTTG  233
            |||| .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  790  CCTGAAAGCATTGTCCCAATTCCTTCTTCTAATGAAGAAATACGCTTAGTTGATGATGCGTTTGGCAAAATTTG  863

Query  234  TCACATGGTCAGTGATGGCTCTTGGGTGGTTCATGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCA  307
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  864  TCACATGGTCAGTGATGGCTCTTGGGTGGTTCGTGTTCAGGCAGCAAAACTGTTGGGCTCTATGGAGCAAGTCA  937

Query  308  GTTCTCATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAG  381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  938  GTTCTCATTTCTTGGAGCAGACCCTTGACAAGAAGCTGATGTCAGATCTGAGGAGGAAACGTACTGCACATGAG  1011

Query  382  CGTGCCAAGGAACTTTACAGTTCAGGGGAGTTTTCCAGTGGCAGAAAGTGGGAAGATGATGCTCCCAAGGAAGA  455
            |||||||||||||||||||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1012  CGTGCCAAGGAACTTTACAGTTCGGGGGAGTTTTCCAGTGGCAGAAAGTGGGGAGATGATGCTCCCAAGGAAGA  1085

Query  456  AGTAGATACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGA  529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086  AGTAGATACCGGGGCTGTGAACTTGATTGAGTCAGGAGCTTGTGGAGCTTTTGTTCATGGGTTGGAAGATGAGA  1159

Query  530  TGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAG  603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1160  TGTATGAGGTTCGTATTGCTGCTGTGGAGGCCCTCTGCATGTTGGCCCAGTCTTCACCCTCTTTTGCTGAGAAG  1233

Query  604  TGCCTTGATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCCATACATACCATGAG  677
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1234  TGCCTTGATTTCCTAGTTGACATGTTCAACGATGAAATTGAGGAAGTACGTCTGCAGTCTATACATACCATGAG  1307

Query  678  AAAAATCTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCAGCCA  751
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1308  AAAAATCTCTAACAACATCACCCTCCGAGAAGATCAGCTTGACACTGTCCTGGCTGTGCTAGAGGATTCATCCA  1381

Query  752  GAGATATTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCA  825
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382  GAGATATTCGAGAGGCTCTTCATGAACTCTTATGCTGTACTAATGTTTCAACCAAAGAAGGGATTCATCTTGCA  1455

Query  826  TTGGTGGAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCT  899
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1456  TTGGTGGAGCTGCTGAAAAATTTAACCAAGTACCCTACTGATAGGGACTCCATATGGAAGTGCTTGAAGTTTCT  1529

Query  900  GGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAG  973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1530  GGGAAGTCGGCATCCAACCCTGGTGCTTCCCTTGGTGCCAGAGCTTCTGAGCACCCACCCATTTTTTGACACAG  1603

Query  974  CTGAACCAGACATGGATGATCCAGCTTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCA  1047
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1604  CTGAACCAGACATGGATGATCCAGCTTATATTGCAGTTTTGGTACTTATTTTCAATGCTGCTAAAACCTGTCCA  1677

Query 1048  ACAATGCGAGCATTGTTCTCAGATCACACCGTCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGT  1121
            |||||||.||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1678  ACAATGCCAGCATTGTTCTCAGATCACACCTTCAGGCACTATGCCTACCTCCGAGACAGTCTTTCTCATCTTGT  1751

Query 1122  TCCTGCCTTGAGGTTACCAGGTAGAAAACTGGTGTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATC  1195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1752  TCCTGCCTTGAGGTTACCAGGTAGAAAACTGGTGTCATCAGCTGTTTCTCCCAGCATCATACCTCAAGAGGATC  1825

Query 1196  CTTCGCAGCAGTTCCTGCAGCAGAGCCTTGAAAGAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAG  1269
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1826  CTTCCCAGCAGTTCCTGCAGCAGAGCCTTGAAAGAGTGTATAGTCTTCAGCACTTGGACCCTCAGGGAGCCCAG  1899

Query 1270  GAGCTGCTGGAATTCACCATC-----------------------------------------------------  1290
            |||||||||||||||||||||                                                     
Sbjct 1900  GAGCTGCTGGAATTCACCATCAGGGATCTGCAAAGACTTGGAGAACTTCAATCTGAATTGGCAGGAGTAGCTGA  1973

Query 1291  -----------------------------------------AGGCCTTGCAGGAAAAGTCGTGGAATG------  1317
                                                     ||||||||||||||||||.||||||||      
Sbjct 1974  TTTCTCTGCCACCTATCTTCGCTGTCAACTACTTCTCATCAAGGCCTTGCAGGAAAAGTTGTGGAATGTAGCTG  2047

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2048  CCCCTTTGTATTTGAAGCAGAGTGATTTGGCCTCAGCAGCAGCGAAACAGATTATGGAAGAGACCTACAAAATG  2121

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2122  GAATTCATGTACAGTGGTGTGGAGAATAAGCAGGTGGTGATTATACATCACATGAGGCTGCAGGCCAAAGCTTT  2195

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2196  GCAACTTATAGTAACAGCACGAACTACACGAGGACTTGACCCCTTATTTGGGATGTGTGAAAAATTTTTACAGG  2269

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2270  AAGTAGACTTTTTTCAGAGGTATTTCATCGCTGATTTGCCCCACTTGCAGGACAGCTTTGTGGACAAACTCCTT  2343

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2344  GACCTTATGCCCCGACTCATGACATCCAAACCTGCAGAAGTGGTCAAAATTCTACAGACCATGCTGCGACAGAG  2417

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2418  TGCCTTTCTGCATCTCCCGCTTCCAGAGCAGATCCACAAAGCCTCAGCCACCATCATCGAGCCAGCGGGCGAGT  2491

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2492  CAGACAACCCTTTGCGGTTTACCTCTGGGTTGGTGGTTGCCCTGGATGTTGATGCAACCCTGGAGCATGTGCAG  2565

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2566  GATCCTCAGAACACTGTTAAGGTCCAGGTCTTATATCCAGATGGCCAGGCTCAGATGATTCACCCCAAGCCTGC  2639

Query 1318  --------------------------------------------------------------------------  1317
                                                                                      
Sbjct 2640  AGACTTCCGGAATCCTGGCCCAGGGCGGCACCGGCTCATCACTCAGGTTTATCTCTCCCACACCGCTTGGACAG  2713

Query 1318  -----------------  1317
                             
Sbjct 2714  GATGTGCCATGAAGCTG  2730

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