Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13781
- Subject:
- NR_160526.1
- Aligned Length:
- 3176
- Identities:
- 242
- Gaps:
- 2903
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGGTCTCAGTCCACACTGGGGAACAGGAAATGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACCCAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTATGAATCTCCAGAACTTGAATCCCAACAGGAAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGATCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAGTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTATGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACCAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGCAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCTTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGTTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTGTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCAAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAATA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTTCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGTTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTTGTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAATCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTGAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTTCT 2368
Query 1 ----------------------ATGGAGTCTTGCT-CTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCAC 51
||||||||||||| |||||.|||||||||||||||||||||.|||||||..|
Sbjct 2369 TTATTTTCTTTATTTTTTTGAGATGGAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCGGC 2442
Query 52 TCACTGCAACCTCTGCGTACCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGG-- 123
|||||||||||||.||.|.|||||||||||.||||||||||||||||.||||.|||||||||||||||||||
Sbjct 2443 TCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGGCA 2516
Query 124 --TGCCCACCA---CCACAGCTGGCTAATTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGAC 192
|| |||||| ||| |||||||||||||||||||||||||||.||||||.|||||.||||||||.|
Sbjct 2517 CTTG-CCACCATTCCCA------GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGC 2583
Query 193 TGGTCTCGAACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCC 266
|||||||||||||||||||| .|||.||.|||..|||||||.|||||||||.|.|||||||.|||..||||||
Sbjct 2584 TGGTCTCGAACTCCTGACCT--TGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCC 2655
Query 267 ACTGCGCCTGGCCATT---------------------------------------------------------- 282
||...|||.|||..||
Sbjct 2656 ACCATGCCCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATAT 2729
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2730 TTTTTCTTATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAA 2803
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2804 ACCTGTAGGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAG 2877
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2878 TAAGGCTTATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTC 2951
Query 283 -------------------------------------------------------------------------- 282
Sbjct 2952 AGAATTCTAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTC 3025
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3026 AAAGATGGACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTA 3099
Query 283 -------------------------------------------------------------------- 282
Sbjct 3100 TTATATAAAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA 3167
