Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14269
Subject:
XM_006507816.1
Aligned Length:
1433
Identities:
1108
Gaps:
143

Alignment

Query    1  ATGCTGGGGGTCCGCTGCCTGCTGCGGTCCG-TGCGCTTCTGTTCCTCCGCCCCCTTCCCCAAGCACAAACCTT  73
            |||||.||||.|||..||||||| |||..|| |||||.||||||||||||...|||.|||||.||.|....|.|
Sbjct    1  ATGCTCGGGGCCCGGCGCCTGCT-CGGCGCGCTGCGCCTCTGTTCCTCCGTTTCCTGCCCCAGGCCCCGCGCGT  73

Query   74  CAGCCAAACTGAGCGTGCGGGACGCTCTCGGGGCTCAGAACGCGAGTGGGGAGCGCATTAAGATCCAGGGATGG  147
            |.||||||.||.|||||||||||||.|||.|||..|||.|||||||.||||||.||.|.|.|.|.|||||||||
Sbjct   74  CTGCCAAAATGCGCGTGCGGGACGCCCTCAGGGTCCAGGACGCGAGAGGGGAGTGCGTAACGGTGCAGGGATGG  147

Query  148  ATTCGTTCTGTCCGATCCCAGAAGGAAGTCTTGTTCCTGCATGTAAATGATGGGTCATCTTTGGAAAGCCTTCA  221
            ||.||.||.|||.||||||||||||||||.||||||||||||||||||||.||.||.|||||||||||||||||
Sbjct  148  ATCCGGTCCGTCAGATCCCAGAAGGAAGTTTTGTTCCTGCATGTAAATGACGGATCTTCTTTGGAAAGCCTTCA  221

Query  222  GGTTGTTGCAGATTCAGGCCTTGACAGTAGAGAATTAACTTTTGGGAGTTCTGTGGAAGTACAAGGGCAGCTGA  295
            |.|||||||.||||||.||.|.||||||||||||||.||||||||||||||||||.||||.||||||||||||.
Sbjct  222  GATTGTTGCGGATTCAAGCTTCGACAGTAGAGAATTGACTTTTGGGAGTTCTGTGCAAGTCCAAGGGCAGCTGG  295

Query  296  TAAAAAGTCCATCCAAAAGGCAAAATGTGGAACTGAAGGCAGAAAAAATTAAAGTTATTGGAAATTGTGATGCC  369
            |.|||||||..|||||.|||||||||||||||||||||||||||||.|||.|.|||||||||.|.|||||.|||
Sbjct  296  TCAAAAGTCAGTCCAAGAGGCAAAATGTGGAACTGAAGGCAGAAAAGATTGAGGTTATTGGAGACTGTGAAGCC  369

Query  370  AAGGATTTCCCCATCAAATATAAAGAGAGGCATCCTCTGGAGTACCTGCGACAATATCCTCACTTTAGGTGTAG  443
            ||||..|||||.||.||.|||||.|||.|.||.|||||||||||||||.||||.|||||||||.|.|||||.||
Sbjct  370  AAGGCATTCCCTATAAAGTATAAGGAGCGACACCCTCTGGAGTACCTGAGACAGTATCCTCACCTGAGGTGCAG  443

Query  444  GACTAACGTTCTGGGTTCTATATTGAGGATTCGCAGTGAAGCGACAGCTGCTATTCATTCTTTCTTTAAGGACA  517
            ||||||.|.|||||||||||||||||||.|.|||||||||||.|||||||||||||||||.|.|||||||||||
Sbjct  444  GACTAATGCTCTGGGTTCTATATTGAGGGTCCGCAGTGAAGCCACAGCTGCTATTCATTCCTACTTTAAGGACA  517

Query  518  GTGGCTTTGTACATATTCATACTCCAATAATCACATCCAATGACTCTGAGGGAGCTGGAGAACTTTTTCAACTT  591
            .|||||||||.||.||||||||.|||.||.||||||||||.||||.||||||.||.|||||.|||||||||.|.
Sbjct  518  ATGGCTTTGTGCACATTCATACCCCAGTACTCACATCCAACGACTGTGAGGGGGCCGGAGAGCTTTTTCAAGTG  591

Query  592  GAACCTTCAGGCAAACTTAAGGTACCTGAGGAGAATTTCTTCAATGTTCCTGCTTTCTTAACTGTCTCAGGACA  665
            ||.||||||.|||||.|.||||.|||..||||||.||||||..|||||||||||||||||||||||||||||||
Sbjct  592  GAGCCTTCAAGCAAAATAAAGGGACCCAAGGAGAGTTTCTTTGATGTTCCTGCTTTCTTAACTGTCTCAGGACA  665

Query  666  ACTTCATCTAGAAGTGATGTCAGGAGCTTTTACTCAAGTGTTTACCTTTGGTCCGACCTTCCGAGCTGAAAATT  739
            ||||||.||||||||||||||||||||||||||.|||||.||||||||||||||.||.|||||||||||.||||
Sbjct  666  ACTTCACCTAGAAGTGATGTCAGGAGCTTTTACCCAAGTATTTACCTTTGGTCCAACATTCCGAGCTGAGAATT  739

Query  740  CTCAGAGCCGGAGGCACCTGGCAGAGTTTTATATGATAGAAGCAGAGATTTCTTTTGTTGACAGCCTTCAAGAT  813
            |||||||||||||.||||||||.||.|||||||||.|.|||||.|||||||||||||||||.||||||||.|||
Sbjct  740  CTCAGAGCCGGAGACACCTGGCTGAATTTTATATGGTTGAAGCGGAGATTTCTTTTGTTGAAAGCCTTCAGGAT  813

Query  814  CTTATGCAGGTTATAGAGGAACTGTTCAAGGCTACAACAATGATGGTTCTCTCAAAATGTCCTGAAGATGTTGA  887
            ||.||||||||.||.||||||||.||||||||.||.||...|||||||||||||.|.|||||||||||||||||
Sbjct  814  CTCATGCAGGTCATGGAGGAACTCTTCAAGGCGACCACGGAGATGGTTCTCTCACACTGTCCTGAAGATGTTGA  887

Query  888  ACTCTGTCACAAATTCATAGCACCTGGCCAAAAGGACAGATTAGAACATATGCTAAAAAACAACTTTTTAATCA  961
            |.|.||||||.|.||||||||..|||||||.||||.||||.|||||||||||||||||||||||||..||||||
Sbjct  888  ATTGTGTCACCAGTTCATAGCTGCTGGCCAGAAGGGCAGACTAGAACATATGCTAAAAAACAACTTCCTAATCA  961

Query  962  TTTCTTATACTGAAGCAGTGGAGATCTTAAAGCAAGCATCCCAGAACTTCACCTTTACCCCAGAGTGGGGTGCT  1035
            ||||||||||.||.|||.|.||||||||||||||||||||||||||||||.|||||||.||             
Sbjct  962  TTTCTTATACGGAGGCAATTGAGATCTTAAAGCAAGCATCCCAGAACTTCGCCTTTACACC-------------  1022

Query 1036  GACCTACGGACTGAACATGAAAAGTACCTGGTGAAGCACTGTGGCAACATACCTGTCTTCGTTATTAATTATCC  1109
                                                                                      
Sbjct 1023  --------------------------------------------------------------------------  1022

Query 1110  ATTAACACTCAAGCCTTTCTACATGAGGGATAATGAAGATGGCCCTCAGCACACGGTTGCTGCTGTTGATCTTC  1183
                                                               ||.||||||||||||.|||||||
Sbjct 1023  ---------------------------------------------------CAAGGTTGCTGCTGTAGATCTTC  1045

Query 1184  TGGTTCCTGGAGTTGGGGAACTCTTTGGAGGAGGCCTCAGAGAAGAACGATACCATTTCTTAGAGGAGCGCTTA  1257
            |||||||||||||||||||.|||||||||||..|||||||.||.|||||.|||||..||.|||||.||||..||
Sbjct 1046  TGGTTCCTGGAGTTGGGGAGCTCTTTGGAGGTAGCCTCAGGGAGGAACGGTACCACGTCCTAGAGCAGCGACTA  1119

Query 1258  GCCAGATCGGGACTTACAGAAGTCTACCAATGGTATCTGGACCTTCGTCGA-TTTGGATCTGTGCCACATGGAG  1330
            ||.|||||.||||||||..|||.||||||.|||||.|||||.||||| |.| ||||||||||||||.|||||||
Sbjct 1120  GCAAGATCAGGACTTACGAAAGCCTACCAGTGGTACCTGGATCTTCG-CAAGTTTGGATCTGTGCCCCATGGAG  1192

Query 1331  GTTTTGGGATGGGATTTGAACGCTACCTGCAGTGCATCTTGGGTGTTGACAATATCAAAGATGTTATCCCTTTC  1404
            |.||.|||||||||||||||||||||.|.|||||||||.|.||.|||||||||||||||||||||||||||||.
Sbjct 1193  GCTTCGGGATGGGATTTGAACGCTACTTACAGTGCATCCTAGGAGTTGACAATATCAAAGATGTTATCCCTTTT  1266

Query 1405  CCAAGGTTTCCTCA-TCATGCCTTTTA  1430
            |||||||||.|||| ||.||.|||||.
Sbjct 1267  CCAAGGTTTACTCATTCGTGTCTTTTG  1293

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